Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:38 (2164670): wrapper (7.7.26015): starting
19:31:38 (2164670): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:31:38] Arguments: --nthreads 8
[2025-10-11 19:31:38] Threads: 8
[2025-10-11 19:31:38] Checking for CVMFS
[2025-10-11 19:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:31:38] 2.13.2.0 4298 23574 222984 151600 1 65 23261755 32935937 4331 16776704 0 67742295 99.716 51554524 29848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:31:38] CVMFS is ok
[2025-10-11 19:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:31:38] Further information can be found at the LHC@home message board.
[2025-10-11 19:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:31:38] Checking for apptainer binary...
[2025-10-11 19:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:31:38] Running /usr/bin/apptainer --version
[2025-10-11 19:31:38] apptainer version 1.4.3-1.el9
[2025-10-11 19:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:31:38] c-8-24.aglt2.org
[2025-10-11 19:31:38] apptainer works
[2025-10-11 19:31:38] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:31:38] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:31:38] Starting ATLAS job with PandaID=6838773212
[2025-10-11 19:31:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:16:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:16:04] 2025-10-12 01:15:17,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:16:04] 2025-10-12 01:15:17,200 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:16:04] 2025-10-12 01:15:17,200 | INFO     | sum of square deviations: 329031285.5
[2025-10-11 21:16:04] 2025-10-12 01:15:17,201 | INFO     | sum of deviations: -11943451263.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,201 | INFO     | mean x: 1760228613.5
[2025-10-11 21:16:04] 2025-10-12 01:15:17,201 | INFO     | mean y: 2211005.294117647
[2025-10-11 21:16:04] 2025-10-12 01:15:17,201 | INFO     | -- intersect: 63896453235.56773
[2025-10-11 21:16:04] 2025-10-12 01:15:17,201 | INFO     | intersect: 63896453235.56773
[2025-10-11 21:16:04] 2025-10-12 01:15:17,202 | INFO     | chi2: 2.5731947170944203
[2025-10-11 21:16:04] 2025-10-12 01:15:17,202 | INFO     | sum of square deviations: 282974608.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | sum of deviations: -964643325.0000021
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | mean x: 1760228461.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | mean y: 2246656.597938144
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | -- intersect: 6002759025.462769
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | intersect: 6002759025.462769
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | chi2: 1.6438024636527173
[2025-10-11 21:16:04] 2025-10-12 01:15:17,203 | INFO     | current chi2=1.6438024636527173 (change=36.118224838077815 %)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,204 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,204 | INFO     | sum of deviations: -500784776.4999993
[2025-10-11 21:16:04] 2025-10-12 01:15:17,204 | INFO     | mean x: 1760228308.5
[2025-10-11 21:16:04] 2025-10-12 01:15:17,204 | INFO     | mean y: 2248354.6195652173
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | -- intersect: 3653397107.969394
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | intersect: 3653397107.969394
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | chi2: 1.6464117871580755
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | current chi2=1.6464117871580755 (change=-0.15873704797594265 %)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | right removable region: 91
[2025-10-11 21:16:04] 2025-10-12 01:15:17,205 | INFO     | sum of square deviations: 282974608.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,206 | INFO     | sum of deviations: -26091648644.999996
[2025-10-11 21:16:04] 2025-10-12 01:15:17,206 | INFO     | mean x: 1760228766.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,206 | INFO     | mean y: 2256985.6082474226
[2025-10-11 21:16:04] 2025-10-12 01:15:17,206 | INFO     | -- intersect: 162303994310.7251
[2025-10-11 21:16:04] 2025-10-12 01:15:17,206 | INFO     | intersect: 162303994310.7251
[2025-10-11 21:16:04] 2025-10-12 01:15:17,207 | INFO     | chi2: 1.0524609853968352
[2025-10-11 21:16:04] 2025-10-12 01:15:17,207 | INFO     | current chi2=1.0524609853968352 (change=59.099053856863 %)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,207 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,207 | INFO     | sum of deviations: -23131973297.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | mean x: 1760228918.5
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | mean y: 2246094.3260869565
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | -- intersect: 168654147465.64685
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | intersect: 168654147465.64685
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | chi2: 1.0533924512309922
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | current chi2=1.0533924512309922 (change=-0.08850359748070168 %)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,208 | INFO     | left removable region: 20
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | sum of square deviations: 110960220.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | sum of deviations: -5625337833.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | mean x: 1760228888.0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | mean y: 2259666.915492958
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | -- intersect: 89240386253.23553
[2025-10-11 21:16:04] 2025-10-12 01:15:17,209 | INFO     | intersect: 89240386253.23553
[2025-10-11 21:16:04] 2025-10-12 01:15:17,210 | INFO     | chi2: 0.04468053508792421
[2025-10-11 21:16:04] 2025-10-12 01:15:17,210 | INFO     | -- intersect: 89240386253.23553
[2025-10-11 21:16:04] 2025-10-12 01:15:17,210 | INFO     | current memory leak: -50.70 B/s (using 71 data points, chi2=0.04)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,210 | INFO     | could have reported an average CPU frequency of 2648 MHz (7 samples)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | ..............................
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . Timing measurements:
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . get job = 0 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . initial setup = 3 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . payload setup = 4 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . stage-in = 0 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . payload execution = 6177 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . stage-out = 0 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,211 | INFO     | . log creation = 0 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,212 | INFO     | ..............................
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | 
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | job summary report
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | --------------------------------------------------
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | PanDA job id: 6838773212
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | task id: 46676269
[2025-10-11 21:16:04] 2025-10-12 01:15:17,650 | INFO     | errors: (none)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | pilot state: finished 
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | transexitcode: 0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | exeerrorcode: 0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | exeerrordiag: 
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | exitcode: 0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | exitmsg: OK
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | cpuconsumptiontime: 44050 s
[2025-10-11 21:16:04] 2025-10-12 01:15:17,651 | INFO     | nevents: 400
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | neventsw: 0
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | pid: 2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | pgrp: 2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | corecount: 8
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | event service: False
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6186: 2376045, 6187: 2385043, 6189: 2385099, 6193: 2385421}
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | --------------------------------------------------
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | 
[2025-10-11 21:16:04] 2025-10-12 01:15:17,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 21:16:04] 2025-10-12 01:15:17,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:16:04] 2025-10-12 01:15:17,674 | INFO     | job 6838773212 has completed (purged errors)
[2025-10-11 21:16:04] 2025-10-12 01:15:17,674 | INFO     | overall cleanup function is called
[2025-10-11 21:16:04] 2025-10-12 01:15:18,682 | INFO     | --- collectZombieJob: --- 10, [2176412]
[2025-10-11 21:16:04] 2025-10-12 01:15:18,682 | INFO     | zombie collector waiting for pid 2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:18,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:16:04] 2025-10-12 01:15:18,682 | INFO     | collected zombie processes
[2025-10-11 21:16:04] 2025-10-12 01:15:18,682 | INFO     | will attempt to kill all subprocesses of pid=2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:18,957 | INFO     | process IDs to be killed: [2176412] (in reverse order)
[2025-10-11 21:16:04] 2025-10-12 01:15:19,030 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:16:04] 2025-10-12 01:15:19,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:16:04] 2025-10-12 01:15:19,040 | INFO     | did not find any defunct processes belonging to 2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:19,047 | INFO     | did not find any defunct processes belonging to 2176412
[2025-10-11 21:16:04] 2025-10-12 01:15:19,048 | INFO     | ready for new job
[2025-10-11 21:16:04] 2025-10-12 01:15:19,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:16:04] 2025-10-12 01:15:19,051 | INFO     | ***************************************
[2025-10-11 21:16:04] 2025-10-12 01:15:19,052 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:16:04] 2025-10-12 01:15:19,052 | INFO     | ***************************************
[2025-10-11 21:16:04] 2025-10-12 01:15:19,052 | INFO     | 
[2025-10-11 21:16:04] 2025-10-12 01:15:19,066 | INFO     | architecture information:
[2025-10-11 21:16:04] 2025-10-12 01:15:19,066 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:16:04] 2025-10-12 01:15:19,080 | INFO     | cat /etc/os-release:
[2025-10-11 21:16:04] NAME="CentOS Linux"
[2025-10-11 21:16:04] VERSION="7 (Core)"
[2025-10-11 21:16:04] ID="centos"
[2025-10-11 21:16:04] ID_LIKE="rhel fedora"
[2025-10-11 21:16:04] VERSION_ID="7"
[2025-10-11 21:16:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:16:04] ANSI_COLOR="0;31"
[2025-10-11 21:16:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:16:04] HOME_URL="https://www.centos.org/"
[2025-10-11 21:16:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:16:04] 
[2025-10-11 21:16:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:16:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:16:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:16:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:16:04] 
[2025-10-11 21:16:04] 2025-10-12 01:15:19,081 | INFO     | ***************************************
[2025-10-11 21:16:04] 2025-10-12 01:15:19,583 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 21:16:04] 2025-10-12 01:15:19,596 | INFO     | sufficient remaining disk space (74392272896 B)
[2025-10-11 21:16:04] 2025-10-12 01:15:19,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:16:04] 2025-10-12 01:15:19,597 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:16:04] 2025-10-12 01:15:19,597 | INFO     | update_server=False
[2025-10-11 21:16:04] 2025-10-12 01:15:19,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:16:04] 2025-10-12 01:15:19,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:16:04] 2025-10-12 01:15:19,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:16:04] 2025-10-12 01:15:19,694 | INFO     | all job control threads have been joined
[2025-10-11 21:16:04] 2025-10-12 01:15:20,030 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:16:04] 2025-10-12 01:15:20,030 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:16:04] 2025-10-12 01:15:20,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:16:04] 2025-10-12 01:15:20,030 | INFO     | will abort loop
[2025-10-11 21:16:04] 2025-10-12 01:15:20,584 | INFO     | all data control threads have been joined
[2025-10-11 21:16:04] 2025-10-12 01:15:20,605 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:20,699 | INFO     | [job] control thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:20,810 | INFO     | all payload control threads have been joined
[2025-10-11 21:16:04] 2025-10-12 01:15:20,838 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:20,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:20,973 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,009 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,036 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,285 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,587 | INFO     | [data] control thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,603 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,671 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,815 | INFO     | [payload] control thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,826 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:21,927 | INFO     | [job] validate thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:22,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:16:04] 2025-10-12 01:15:23,336 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:23,609 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:16:04] 2025-10-12 01:15:50,588 | INFO     | PID=2168324 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:16:04] 2025-10-12 01:15:50,588 | INFO     | .. there are 6 such processes running
[2025-10-11 21:16:04] 2025-10-12 01:15:50,589 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:16:04] 2025-10-12 01:15:50,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:16:04] 2025-10-12 01:15:50,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:16:04] 2025-10-12 01:15:59,211 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:16:04] 2025-10-12 01:15:59,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042694264640)>', '<ExcThread(monitor, started 140041904977664)>']
[2025-10-11 21:16:04] 2025-10-12 01:15:59,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:16:04] 2025-10-12 01:15:59,620 | INFO     | [monitor] control thread has ended
[2025-10-11 21:16:04] 2025-10-12 01:16:04,224 | INFO     | all workflow threads have been joined
[2025-10-11 21:16:04] 2025-10-12 01:16:04,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:16:04] 2025-10-12 01:16:04,224 | INFO     | traces error code: 0
[2025-10-11 21:16:04] 2025-10-12 01:16:04,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:16:04] 2025-10-12 01:16:04,342 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:16:04] 2025-10-12 01:16:04,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:16:04] 2025-10-12 01:16:04,348 [wrapper] pilotpid: 2168324
[2025-10-11 21:16:04] 2025-10-12 01:16:04,350 [wrapper] Pilot exit status: 0
[2025-10-11 21:16:04] 2025-10-12 01:16:04,359 [wrapper] pandaids: 6838773212
[2025-10-11 21:16:04] 2025-10-12 01:16:04,412 [wrapper] cleanup supervisor_pilot 2402749 2168325
[2025-10-11 21:16:04] 2025-10-12 01:16:04,415 [wrapper] Test setup, not cleaning
[2025-10-11 21:16:04] 2025-10-12 01:16:04,417 [wrapper] apfmon messages muted
[2025-10-11 21:16:04] 2025-10-12 01:16:04,420 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:16:04] 2025-10-12 01:16:04,422 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:16:04]  *** Error codes and diagnostics ***
[2025-10-11 21:16:04]     "exeErrorCode": 0,
[2025-10-11 21:16:04]     "exeErrorDiag": "",
[2025-10-11 21:16:04]     "pilotErrorCode": 0,
[2025-10-11 21:16:04]     "pilotErrorDiag": "",
[2025-10-11 21:16:04]  *** Listing of results directory ***
[2025-10-11 21:16:04] total 410008
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 21:16:04] -rwx------. 1 boincer umatlas     36292 Oct 11 14:29 runpilot2-wrapper.sh
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:29 queuedata.json
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:16:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:31 run_atlas
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:31 job.xml
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas 219392088 Oct 11 19:31 EVNT.46676267._002516.pool.root.1
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:31 start_atlas.sh
[2025-10-11 21:16:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:31 shared
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 19:31 input.tar.gz
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:31 boinc_lockfile
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:31 pandaJob.out
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas    975528 Oct 11 19:31 agis_schedconf.cvmfs.json
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:31 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:16:04] drwx------. 5 boincer umatlas      4096 Oct 11 19:31 pilot3
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 21:09 init_data.xml
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas 194024344 Oct 11 21:14 HITS.46676269._062642.pool.root.1
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas       529 Oct 11 21:14 boinc_task_state.xml
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas      1031 Oct 11 21:15 memory_monitor_summary.json
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas    356613 Oct 11 21:15 log.46676269._062642.job.log.tgz.1
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas      7822 Oct 11 21:15 heartbeat.json
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas        95 Oct 11 21:15 pilot_heartbeat.json
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:16 wrapper_checkpoint.txt
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:16 boinc_mmap_file
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas      5009 Oct 11 21:16 pilotlog.txt
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas    904508 Oct 11 21:16 log.46676269._062642.job.log.1
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas       357 Oct 11 21:16 output.list
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:16 runtime_log
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas   1280000 Oct 11 21:16 result.tar.gz
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 21:16 runtime_log.err
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas       650 Oct 11 21:16 bSLNDmAWtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzFhNDmsEQUxm.diag
[2025-10-11 21:16:04] -rw-r--r--. 1 boincer umatlas     20900 Oct 11 21:16 stderr.txt
[2025-10-11 21:16:04] HITS file was successfully produced:
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas 194024344 Oct 11 21:14 shared/HITS.pool.root.1
[2025-10-11 21:16:04]  *** Contents of shared directory: ***
[2025-10-11 21:16:04] total 405568
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas 219392088 Oct 11 19:31 ATLAS.root_0
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:31 start_atlas.sh
[2025-10-11 21:16:04] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 19:31 input.tar.gz
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas 194024344 Oct 11 21:14 HITS.pool.root.1
[2025-10-11 21:16:04] -rw-------. 1 boincer umatlas   1280000 Oct 11 21:16 result.tar.gz
21:16:06 (2164670): run_atlas exited; CPU time 44218.201005
21:16:06 (2164670): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN