Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:47:35 (3572885): wrapper (7.7.26015): starting
07:47:35 (3572885): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:47:35] Arguments: --nthreads 4
[2025-10-13 07:47:35] Threads: 4
[2025-10-13 07:47:35] Checking for CVMFS
[2025-10-13 07:47:35] No cvmfs_config command found, will try listing directly
[2025-10-13 07:47:35] CVMFS is ok
[2025-10-13 07:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:47:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:47:35] Further information can be found at the LHC@home message board.
[2025-10-13 07:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:47:35] Checking for apptainer binary...
[2025-10-13 07:47:35] which: no apptainer in ((null))
[2025-10-13 07:47:35] apptainer is not installed, using version from CVMFS
[2025-10-13 07:47:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:47:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 07:47:36] apptainer works
[2025-10-13 07:47:36] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:47:36] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:47:36] Starting ATLAS job with PandaID=6838773033
[2025-10-13 07:47:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:17:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:17:06] 2025-10-13 08:09:31,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,284 | INFO     | time since job start (8502s) is within the limit (172800.0s)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,470 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:17:06] 2025-10-13 08:09:32,490 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2747.9914531250006
[2025-10-13 10:17:06] 2025-10-13 08:09:32,514 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6838773033/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,515 | INFO     | extracted standard info from prmon json
[2025-10-13 10:17:06] 2025-10-13 08:09:32,515 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:17:06] 2025-10-13 08:09:32,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:17:06] 2025-10-13 08:09:32,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:17:06] 2025-10-13 08:09:32,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:17:06] 2025-10-13 08:09:32,518 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:17:06] 2025-10-13 08:09:32,519 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,519 | INFO     | sum of deviations: 6854601475.999999
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | mean x: 1760338713.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | mean y: 2341901.2589928056
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | -- intersect: -14487982349.929796
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | intersect: -14487982349.929796
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | chi2: 1.2231253231714212
[2025-10-13 10:17:06] 2025-10-13 08:09:32,520 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,521 | INFO     | sum of deviations: 6655712592.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,521 | INFO     | mean x: 1760338560.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,521 | INFO     | mean y: 2341551.2014925373
[2025-10-13 10:17:06] 2025-10-13 08:09:32,521 | INFO     | -- intersect: -15702086728.579096
[2025-10-13 10:17:06] 2025-10-13 08:09:32,522 | INFO     | intersect: -15702086728.579096
[2025-10-13 10:17:06] 2025-10-13 08:09:32,522 | INFO     | chi2: 1.2243726919318703
[2025-10-13 10:17:06] 2025-10-13 08:09:32,522 | INFO     | current chi2=1.2243726919318703 (change=-0.10198208939168898 %)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,522 | INFO     | right removable region: 133
[2025-10-13 10:17:06] 2025-10-13 08:09:32,522 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,523 | INFO     | sum of deviations: -8719821076.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,523 | INFO     | mean x: 1760338865.5
[2025-10-13 10:17:06] 2025-10-13 08:09:32,523 | INFO     | mean y: 2368733.8283582088
[2025-10-13 10:17:06] 2025-10-13 08:09:32,523 | INFO     | -- intersect: 20577149650.481197
[2025-10-13 10:17:06] 2025-10-13 08:09:32,523 | INFO     | intersect: 20577149650.481197
[2025-10-13 10:17:06] 2025-10-13 08:09:32,524 | INFO     | chi2: 0.01740436525712785
[2025-10-13 10:17:06] 2025-10-13 08:09:32,524 | INFO     | current chi2=0.01740436525712785 (change=98.57705789199096 %)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,524 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | sum of deviations: -8223404083.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | mean x: 1760339018.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | mean y: 2367785.6589147286
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | -- intersect: 21750726632.664627
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | intersect: 21750726632.664627
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | chi2: 0.01687392116827018
[2025-10-13 10:17:06] 2025-10-13 08:09:32,525 | INFO     | current chi2=0.01687392116827018 (change=3.0477646327287293 %)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,528 | INFO     | left removable region: 20
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | sum of deviations: -5609788262.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | mean x: 1760339140.0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | mean y: 2363288.628318584
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | -- intersect: 22075450198.125404
[2025-10-13 10:17:06] 2025-10-13 08:09:32,529 | INFO     | intersect: 22075450198.125404
[2025-10-13 10:17:06] 2025-10-13 08:09:32,530 | INFO     | chi2: 0.014832819476497339
[2025-10-13 10:17:06] 2025-10-13 08:09:32,530 | INFO     | -- intersect: 22075450198.125404
[2025-10-13 10:17:06] 2025-10-13 08:09:32,530 | INFO     | current memory leak: -12.54 B/s (using 113 data points, chi2=0.01)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,530 | INFO     | could have reported an average CPU frequency of 2736 MHz (8 samples)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | ..............................
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . Timing measurements:
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . get job = 0 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . initial setup = 1 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . payload setup = 8 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . stage-in = 0 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . payload execution = 8457 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . stage-out = 0 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | . log creation = 0 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,531 | INFO     | ..............................
[2025-10-13 10:17:06] 2025-10-13 08:09:32,630 | INFO     | 
[2025-10-13 10:17:06] 2025-10-13 08:09:32,630 | INFO     | job summary report
[2025-10-13 10:17:06] 2025-10-13 08:09:32,630 | INFO     | --------------------------------------------------
[2025-10-13 10:17:06] 2025-10-13 08:09:32,630 | INFO     | PanDA job id: 6838773033
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | task id: 46676269
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | errors: (none)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | pilot state: finished 
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | transexitcode: 0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | exeerrorcode: 0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | exeerrordiag: 
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | exitcode: 0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | exitmsg: OK
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | cpuconsumptiontime: 32482 s
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | nevents: 400
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | neventsw: 0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | pid: 3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:32,631 | INFO     | pgrp: 3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | corecount: 4
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | event service: False
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | sizes: {0: 2348869, 6: 2349131, 11: 2349159, 8470: 2377495, 8472: 2386517, 8474: 2386573, 8484: 2386895}
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | --------------------------------------------------
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | 
[2025-10-13 10:17:06] 2025-10-13 08:09:32,632 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-10-13 10:17:06] 2025-10-13 08:09:32,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:17:06] 2025-10-13 08:09:32,665 | INFO     | job 6838773033 has completed (purged errors)
[2025-10-13 10:17:06] 2025-10-13 08:09:32,666 | INFO     | overall cleanup function is called
[2025-10-13 10:17:06] 2025-10-13 08:09:33,672 | INFO     | --- collectZombieJob: --- 10, [3620136]
[2025-10-13 10:17:06] 2025-10-13 08:09:33,676 | INFO     | zombie collector waiting for pid 3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:33,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:17:06] 2025-10-13 08:09:33,676 | INFO     | collected zombie processes
[2025-10-13 10:17:06] 2025-10-13 08:09:33,676 | INFO     | will attempt to kill all subprocesses of pid=3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:34,169 | INFO     | process IDs to be killed: [3620136] (in reverse order)
[2025-10-13 10:17:06] 2025-10-13 08:09:34,414 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:17:06] 2025-10-13 08:09:34,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:17:06] 2025-10-13 08:09:34,444 | INFO     | did not find any defunct processes belonging to 3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:34,471 | INFO     | did not find any defunct processes belonging to 3620136
[2025-10-13 10:17:06] 2025-10-13 08:09:34,471 | INFO     | ready for new job
[2025-10-13 10:17:06] 2025-10-13 08:09:34,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:17:06] 2025-10-13 08:09:34,473 | INFO     | ***************************************
[2025-10-13 10:17:06] 2025-10-13 08:09:34,474 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:17:06] 2025-10-13 08:09:34,474 | INFO     | ***************************************
[2025-10-13 10:17:06] 2025-10-13 08:09:34,474 | INFO     | 
[2025-10-13 10:17:06] 2025-10-13 08:09:34,482 | INFO     | architecture information:
[2025-10-13 10:17:06] 2025-10-13 08:09:34,482 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:17:06] 2025-10-13 08:09:34,508 | INFO     | cat /etc/os-release:
[2025-10-13 10:17:06] NAME="CentOS Linux"
[2025-10-13 10:17:06] VERSION="7 (Core)"
[2025-10-13 10:17:06] ID="centos"
[2025-10-13 10:17:06] ID_LIKE="rhel fedora"
[2025-10-13 10:17:06] VERSION_ID="7"
[2025-10-13 10:17:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:17:06] ANSI_COLOR="0;31"
[2025-10-13 10:17:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:17:06] HOME_URL="https://www.centos.org/"
[2025-10-13 10:17:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:17:06] 
[2025-10-13 10:17:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:17:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:17:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:17:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:17:06] 
[2025-10-13 10:17:06] 2025-10-13 08:09:34,509 | INFO     | ***************************************
[2025-10-13 10:17:06] 2025-10-13 08:09:35,012 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-10-13 10:17:06] 2025-10-13 08:09:35,034 | INFO     | sufficient remaining disk space (3334715998208 B)
[2025-10-13 10:17:06] 2025-10-13 08:09:35,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:17:06] 2025-10-13 08:09:35,035 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:17:06] 2025-10-13 08:09:35,035 | INFO     | update_server=False
[2025-10-13 10:17:06] 2025-10-13 08:09:35,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:17:06] 2025-10-13 08:09:35,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:17:06] 2025-10-13 08:09:35,261 | INFO     | aborting loop
[2025-10-13 10:17:06] 2025-10-13 08:09:35,379 | INFO     | all job control threads have been joined
[2025-10-13 10:17:06] 2025-10-13 08:09:35,465 | INFO     | all data control threads have been joined
[2025-10-13 10:17:06] 2025-10-13 08:09:36,041 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:17:06] 2025-10-13 08:09:36,073 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,110 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,266 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,366 | INFO     | all payload control threads have been joined
[2025-10-13 10:17:06] 2025-10-13 08:09:36,384 | INFO     | [job] control thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,447 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,470 | INFO     | [data] control thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:36,576 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:37,266 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:37,372 | INFO     | [payload] control thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:37,420 | INFO     | [job] validate thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:37,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:17:06] 2025-10-13 08:09:37,510 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:37,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:17:06] 2025-10-13 08:09:38,070 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:38,646 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:41,508 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:09:45,906 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:17:06] 2025-10-13 08:09:46,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:17:06] 2025-10-13 08:10:02,559 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:17:06] 2025-10-13 08:10:03,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22366067595072)>', '<ExcThread(monitor, started 22365761148672)>']
[2025-10-13 10:17:06] 2025-10-13 08:10:06,299 | INFO     | PID=3585714 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:17:06] 2025-10-13 08:10:06,299 | INFO     | .. there are 7 such processes running
[2025-10-13 10:17:06] 2025-10-13 08:10:06,299 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:17:06] 2025-10-13 08:10:06,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:17:06] 2025-10-13 08:10:06,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:17:06] 2025-10-13 08:10:06,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:17:06] 2025-10-13 08:10:06,300 | INFO     | [monitor] control thread has ended
[2025-10-13 10:17:06] 2025-10-13 08:10:08,730 | INFO     | all workflow threads have been joined
[2025-10-13 10:17:06] 2025-10-13 08:10:08,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:17:06] 2025-10-13 08:10:08,730 | INFO     | traces error code: 0
[2025-10-13 10:17:06] 2025-10-13 08:10:08,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:17:06] 2025-10-13 08:10:08,882 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:17:06] 2025-10-13 08:10:08,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:17:06] 2025-10-13 08:10:08,890 [wrapper] pilotpid: 3585714
[2025-10-13 10:17:06] 2025-10-13 08:10:08,893 [wrapper] Pilot exit status: 0
[2025-10-13 10:17:06] 2025-10-13 08:10:08,907 [wrapper] pandaids: 6838773033
[2025-10-13 10:17:06] 2025-10-13 08:10:09,068 [wrapper] cleanup supervisor_pilot 3855919 3585716
[2025-10-13 10:17:06] 2025-10-13 08:10:09,073 [wrapper] Test setup, not cleaning
[2025-10-13 10:17:06] 2025-10-13 08:10:09,078 [wrapper] apfmon messages muted
[2025-10-13 10:17:06] 2025-10-13 08:10:09,082 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:17:06] 2025-10-13 08:10:09,086 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:17:06]  *** Error codes and diagnostics ***
[2025-10-13 10:17:06]     "exeErrorCode": 0,
[2025-10-13 10:17:06]     "exeErrorDiag": "",
[2025-10-13 10:17:06]     "pilotErrorCode": 0,
[2025-10-13 10:17:06]     "pilotErrorDiag": "",
[2025-10-13 10:17:07]  *** Listing of results directory ***
[2025-10-13 10:17:07] total 413056
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 20:14 pilot3.tar.gz
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 20:21 queuedata.json
[2025-10-13 10:17:07] -rwx------ 1 boinc boinc     36292 Oct 11 20:23 runpilot2-wrapper.sh
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:17:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:47 run_atlas
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:47 job.xml
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc      6687 Oct 13 07:47 init_data.xml
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc 219679031 Oct 13 07:47 EVNT.46676267._002509.pool.root.1
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:47 start_atlas.sh
[2025-10-13 10:17:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:47 shared
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:47 input.tar.gz
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:47 boinc_lockfile
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:47 pandaJob.out
[2025-10-13 10:17:07] -rw------- 1 boinc boinc    973230 Oct 13 07:47 agis_schedconf.cvmfs.json
[2025-10-13 10:17:07] -rw------- 1 boinc boinc   1560580 Oct 13 07:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:17:07] drwx------ 5 boinc boinc      4096 Oct 13 07:47 pilot3
[2025-10-13 10:17:07] -rw------- 1 boinc boinc 196357819 Oct 13 10:08 HITS.46676269._062463.pool.root.1
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc       527 Oct 13 10:08 boinc_task_state.xml
[2025-10-13 10:17:07] -rw------- 1 boinc boinc      1024 Oct 13 10:09 memory_monitor_summary.json
[2025-10-13 10:17:07] -rw------- 1 boinc boinc        95 Oct 13 10:09 pilot_heartbeat.json
[2025-10-13 10:17:07] -rw------- 1 boinc boinc    318721 Oct 13 10:09 log.46676269._062463.job.log.tgz.1
[2025-10-13 10:17:07] -rw------- 1 boinc boinc      7782 Oct 13 10:09 heartbeat.json
[2025-10-13 10:17:07] -rw------- 1 boinc boinc      4907 Oct 13 10:10 pilotlog.txt
[2025-10-13 10:17:07] -rw------- 1 boinc boinc   1199057 Oct 13 10:10 log.46676269._062463.job.log.1
[2025-10-13 10:17:07] -rw------- 1 boinc boinc       357 Oct 13 10:10 output.list
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:10 runtime_log
[2025-10-13 10:17:07] -rw------- 1 boinc boinc   1536000 Oct 13 10:10 result.tar.gz
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc      9084 Oct 13 10:10 runtime_log.err
[2025-10-13 10:17:07] -rw------- 1 boinc boinc       662 Oct 13 10:10 8x5LDmrQtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtDhNDmC6uLGm.diag
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc        25 Oct 13 10:17 wrapper_checkpoint.txt
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:17 boinc_mmap_file
[2025-10-13 10:17:07] -rw-r--r-- 1 boinc boinc     20888 Oct 13 10:17 stderr.txt
[2025-10-13 10:17:07] HITS file was successfully produced:
[2025-10-13 10:17:07] -rw------- 1 boinc boinc 196357819 Oct 13 10:08 shared/HITS.pool.root.1
[2025-10-13 10:17:07]  *** Contents of shared directory: ***
[2025-10-13 10:17:07] total 408372
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc 219679031 Oct 13 07:47 ATLAS.root_0
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:47 start_atlas.sh
[2025-10-13 10:17:07] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:47 input.tar.gz
[2025-10-13 10:17:07] -rw------- 1 boinc boinc 196357819 Oct 13 10:08 HITS.pool.root.1
[2025-10-13 10:17:07] -rw------- 1 boinc boinc   1536000 Oct 13 10:10 result.tar.gz
10:17:08 (3572885): run_atlas exited; CPU time 33056.421538
10:17:08 (3572885): called boinc_finish(0)

</stderr_txt>
]]>

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