Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:08 (1053175): wrapper (7.7.26015): starting
10:08:08 (1053175): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:08:08] Arguments: --nthreads 4
[2025-10-12 10:08:08] Threads: 4
[2025-10-12 10:08:08] Checking for CVMFS
[2025-10-12 10:08:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:08:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:08:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:08:08] 2.9.2.0 2990 2968 94980 151612 3 57 28544937 36864000 0 130560 0 2738514 99.992 101619 837 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 10:08:08] CVMFS is ok
[2025-10-12 10:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:08:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:08:08] Further information can be found at the LHC@home message board.
[2025-10-12 10:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:08:08] Checking for apptainer binary...
[2025-10-12 10:08:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:08:08] Running /usr/bin/apptainer --version
[2025-10-12 10:08:08] apptainer version 1.4.1-1.1
[2025-10-12 10:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:08:08] belleA267b
[2025-10-12 10:08:08] apptainer works
[2025-10-12 10:08:08] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:08:08] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:08:08] Starting ATLAS job with PandaID=6838773086
[2025-10-12 10:08:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:20:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:20:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 11:20:28]  replicas=None
[2025-10-12 11:20:28]  scope=mc23_13p6TeV
[2025-10-12 11:20:28]  status=None
[2025-10-12 11:20:28]  status_code=0
[2025-10-12 11:20:28]  storage_token=
[2025-10-12 11:20:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838773086/log.46676269._062516.job.log.tgz.1
[2025-10-12 11:20:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/fa/log.46676269._062516.job.log.tgz.1
[2025-10-12 11:20:28]  workdir=None
[2025-10-12 11:20:28] ]
[2025-10-12 11:20:28] 2025-10-12 09:19:50,388 | INFO     | transferring file log.46676269._062516.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838773086/log.46676269._062516.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 11:20:28] 2025-10-12 09:19:50,388 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838773086/log.46676269._062516.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0625
[2025-10-12 11:20:28] 2025-10-12 09:19:50,407 | INFO     | adding to output.list: log.46676269._062516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/fa/log.46676269._062516.job.log.tg
[2025-10-12 11:20:28] 2025-10-12 09:19:50,407 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:20:28] 2025-10-12 09:19:50,407 | INFO     | summary of transferred files:
[2025-10-12 11:20:28] 2025-10-12 09:19:50,407 | INFO     |  -- lfn=log.46676269._062516.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:20:28] 2025-10-12 09:19:50,407 | INFO     | stage-out finished correctly
[2025-10-12 11:20:28] 2025-10-12 09:19:50,446 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:20:28] 2025-10-12 09:19:51,485 | INFO     | time since job start (4295s) is within the limit (172800.0s)
[2025-10-12 11:20:28] 2025-10-12 09:19:52,033 | INFO     | job 6838773086 has state=finished
[2025-10-12 11:20:28] 2025-10-12 09:19:52,033 | INFO     | preparing for final server update for job 6838773086 in state='finished'
[2025-10-12 11:20:28] 2025-10-12 09:19:52,033 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:20:28] 2025-10-12 09:19:52,034 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:20:28] 2025-10-12 09:19:52,034 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:20:28] 2025-10-12 09:19:52,034 | INFO     | job 6838773086 has finished - writing final server update
[2025-10-12 11:20:28] 2025-10-12 09:19:52,034 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:20:28] 2025-10-12 09:19:52,035 | INFO     | executing command: lscpu
[2025-10-12 11:20:28] 2025-10-12 09:19:52,055 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:20:28] 2025-10-12 09:19:52,101 | WARNING  | process 1063531 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 11:20:28] 2025-10-12 09:19:52,101 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838773086/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:20:28] 2025-10-12 09:19:52,159 | INFO     | number of running child processes to parent process 1063531: 1
[2025-10-12 11:20:28] 2025-10-12 09:19:52,159 | INFO     | maximum number of monitored processes: 6
[2025-10-12 11:20:28] 2025-10-12 09:19:53,491 | INFO     | time since job start (4297s) is within the limit (172800.0s)
[2025-10-12 11:20:28] 2025-10-12 09:19:54,662 | INFO     | monitor loop #331: job 0:6838773086 is in state 'finished'
[2025-10-12 11:20:28] 2025-10-12 09:19:54,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,496 | INFO     | time since job start (4299s) is within the limit (172800.0s)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,702 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:20:28] 2025-10-12 09:19:55,704 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3301.3975624999994
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838773086/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | INFO     | extracted standard info from prmon json
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:20:28] 2025-10-12 09:19:55,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | sum of deviations: -1247742068.0000002
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | mean x: 1760258715.0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | mean y: 2426139.5714285714
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | -- intersect: 28336608450.893726
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | intersect: 28336608450.893726
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | chi2: 0.056889102114033877
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | -- intersect: 28336608450.893726
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | current memory leak: -16.10 B/s (using 63 data points, chi2=0.06)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,707 | INFO     | could have reported an average CPU frequency of 3728 MHz (6 samples)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | ..............................
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . Timing measurements:
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . get job = 0 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . initial setup = 1 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . payload setup = 4 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . stage-in = 0 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . payload execution = 4270 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . stage-out = 0 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | . log creation = 0 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,708 | INFO     | ..............................
[2025-10-12 11:20:28] 2025-10-12 09:19:55,979 | INFO     | 
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | job summary report
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | --------------------------------------------------
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | PanDA job id: 6838773086
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | task id: 46676269
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | errors: (none)
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | pilot state: finished 
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | transexitcode: 0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | exeerrorcode: 0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | exeerrordiag: 
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | exitcode: 0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | exitmsg: OK
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | cpuconsumptiontime: 16076 s
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | nevents: 400
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | neventsw: 0
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | pid: 1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | pgrp: 1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | corecount: 4
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | event service: False
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | sizes: {0: 2348860, 4: 2349122, 11: 2349150, 4278: 2375370, 4280: 2384430, 4285: 2384568}
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | --------------------------------------------------
[2025-10-12 11:20:28] 2025-10-12 09:19:55,980 | INFO     | 
[2025-10-12 11:20:28] 2025-10-12 09:19:55,981 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 11:20:28] 2025-10-12 09:19:56,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | job 6838773086 has completed (purged errors)
[2025-10-12 11:20:28] 2025-10-12 09:19:56,002 | INFO     | overall cleanup function is called
[2025-10-12 11:20:28] 2025-10-12 09:19:57,009 | INFO     | --- collectZombieJob: --- 10, [1063531]
[2025-10-12 11:20:28] 2025-10-12 09:19:57,009 | INFO     | zombie collector waiting for pid 1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:57,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:20:28] 2025-10-12 09:19:57,009 | INFO     | collected zombie processes
[2025-10-12 11:20:28] 2025-10-12 09:19:57,010 | INFO     | will attempt to kill all subprocesses of pid=1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:57,052 | INFO     | process IDs to be killed: [1063531] (in reverse order)
[2025-10-12 11:20:28] 2025-10-12 09:19:57,085 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:20:28] 2025-10-12 09:19:57,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:20:28] 2025-10-12 09:19:57,087 | INFO     | did not find any defunct processes belonging to 1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:57,088 | INFO     | did not find any defunct processes belonging to 1063531
[2025-10-12 11:20:28] 2025-10-12 09:19:57,088 | INFO     | ready for new job
[2025-10-12 11:20:28] 2025-10-12 09:19:57,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | ***************************************
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | ***************************************
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | 
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | architecture information:
[2025-10-12 11:20:28] 2025-10-12 09:19:57,089 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:20:28] 2025-10-12 09:19:57,103 | INFO     | cat /etc/os-release:
[2025-10-12 11:20:28] NAME="CentOS Linux"
[2025-10-12 11:20:28] VERSION="7 (Core)"
[2025-10-12 11:20:28] ID="centos"
[2025-10-12 11:20:28] ID_LIKE="rhel fedora"
[2025-10-12 11:20:28] VERSION_ID="7"
[2025-10-12 11:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:20:28] ANSI_COLOR="0;31"
[2025-10-12 11:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:20:28] HOME_URL="https://www.centos.org/"
[2025-10-12 11:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:20:28] 
[2025-10-12 11:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:20:28] 
[2025-10-12 11:20:28] 2025-10-12 09:19:57,103 | INFO     | ***************************************
[2025-10-12 11:20:28] 2025-10-12 09:19:57,606 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | INFO     | sufficient remaining disk space (331283955712 B)
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | INFO     | update_server=False
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:20:28] 2025-10-12 09:19:57,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:20:28] 2025-10-12 09:19:57,760 | INFO     | all payload control threads have been joined
[2025-10-12 11:20:28] 2025-10-12 09:19:58,046 | INFO     | all data control threads have been joined
[2025-10-12 11:20:28] 2025-10-12 09:19:58,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:20:28] 2025-10-12 09:19:58,172 | INFO     | aborting loop
[2025-10-12 11:20:28] 2025-10-12 09:19:58,322 | INFO     | all job control threads have been joined
[2025-10-12 11:20:28] 2025-10-12 09:19:58,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:20:28] 2025-10-12 09:19:58,629 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:58,629 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:58,690 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:58,726 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:58,729 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:58,765 | INFO     | [payload] control thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,052 | INFO     | [data] control thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,177 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,191 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,328 | INFO     | [job] control thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,328 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,924 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:19:59,997 | INFO     | [job] validate thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:20:00,466 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:20:00,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:20:28] 2025-10-12 09:20:05,004 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:20:08,262 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:20:28] 2025-10-12 09:20:09,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:20:28] 2025-10-12 09:20:20,957 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:20:28] 2025-10-12 09:20:21,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881811740480)>', '<ExcThread(monitor, started 139880441050880)>']
[2025-10-12 11:20:28] 2025-10-12 09:20:26,034 | INFO     | all workflow threads have been joined
[2025-10-12 11:20:28] 2025-10-12 09:20:26,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:20:28] 2025-10-12 09:20:26,035 | INFO     | traces error code: 0
[2025-10-12 11:20:28] 2025-10-12 09:20:26,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:20:28] 2025-10-12 09:20:28,620 | INFO     | PID=1056960 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:20:28] 2025-10-12 09:20:28,620 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:20:28] 2025-10-12 09:20:28,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:20:28] 2025-10-12 09:20:28,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:20:28] 2025-10-12 09:20:28,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:20:28] 2025-10-12 09:20:28,621 | INFO     | [monitor] control thread has ended
[2025-10-12 11:20:28] 2025-10-12 09:20:28,697 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:20:28] 2025-10-12 09:20:28,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:20:28] 2025-10-12 09:20:28,706 [wrapper] pilotpid: 1056960
[2025-10-12 11:20:28] 2025-10-12 09:20:28,710 [wrapper] Pilot exit status: 0
[2025-10-12 11:20:28] 2025-10-12 09:20:28,721 [wrapper] pandaids: 6838773086
[2025-10-12 11:20:28] 2025-10-12 09:20:28,744 [wrapper] cleanup supervisor_pilot 1073101 1056961
[2025-10-12 11:20:28] 2025-10-12 09:20:28,747 [wrapper] Test setup, not cleaning
[2025-10-12 11:20:28] 2025-10-12 09:20:28,751 [wrapper] apfmon messages muted
[2025-10-12 11:20:28] 2025-10-12 09:20:28,755 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:20:28] 2025-10-12 09:20:28,759 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:20:28]  *** Error codes and diagnostics ***
[2025-10-12 11:20:28]     "exeErrorCode": 0,
[2025-10-12 11:20:28]     "exeErrorDiag": "",
[2025-10-12 11:20:28]     "pilotErrorCode": 0,
[2025-10-12 11:20:28]     "pilotErrorDiag": "",
[2025-10-12 11:20:28]  *** Listing of results directory ***
[2025-10-12 11:20:28] total 411860
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc    557409 Oct 11 20:14 pilot3.tar.gz
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc      5112 Oct 11 20:19 queuedata.json
[2025-10-12 11:20:28] -rwx------ 1 boinc boinc     36292 Oct 11 20:20 runpilot2-wrapper.sh
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:20:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:08 run_atlas
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:08 job.xml
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc 222040219 Oct 12 10:08 EVNT.46676267._002511.pool.root.1
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:08 input.tar.gz
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:08 start_atlas.sh
[2025-10-12 11:20:28] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:08 shared
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:08 boinc_setup_complete
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc      6378 Oct 12 10:08 init_data.xml
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:08 boinc_lockfile
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:08 pandaJob.out
[2025-10-12 11:20:28] -rw------- 1 boinc boinc    975520 Oct 12 10:08 agis_schedconf.cvmfs.json
[2025-10-12 11:20:28] -rw------- 1 boinc boinc   1560580 Oct 12 10:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:20:28] drwx------ 5 boinc boinc      4096 Oct 12 10:08 pilot3
[2025-10-12 11:20:28] -rw------- 1 boinc boinc 193995063 Oct 12 11:19 HITS.46676269._062516.pool.root.1
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:19 boinc_task_state.xml
[2025-10-12 11:20:28] -rw------- 1 boinc boinc        95 Oct 12 11:19 pilot_heartbeat.json
[2025-10-12 11:20:28] -rw------- 1 boinc boinc      1025 Oct 12 11:19 memory_monitor_summary.json
[2025-10-12 11:20:28] -rw------- 1 boinc boinc    264136 Oct 12 11:19 log.46676269._062516.job.log.tgz.1
[2025-10-12 11:20:28] -rw------- 1 boinc boinc      7772 Oct 12 11:19 heartbeat.json
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:20 boinc_mmap_file
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:20 wrapper_checkpoint.txt
[2025-10-12 11:20:28] -rw------- 1 boinc boinc       747 Oct 12 11:20 pilotlog.txt
[2025-10-12 11:20:28] -rw------- 1 boinc boinc    638703 Oct 12 11:20 log.46676269._062516.job.log.1
[2025-10-12 11:20:28] -rw------- 1 boinc boinc       357 Oct 12 11:20 output.list
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:20 runtime_log
[2025-10-12 11:20:28] -rw------- 1 boinc boinc    921600 Oct 12 11:20 result.tar.gz
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc      8797 Oct 12 11:20 runtime_log.err
[2025-10-12 11:20:28] -rw------- 1 boinc boinc       662 Oct 12 11:20 8XKNDmBOtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9ChNDmYpgspn.diag
[2025-10-12 11:20:28] -rw-r--r-- 1 boinc boinc     21858 Oct 12 11:20 stderr.txt
[2025-10-12 11:20:28] HITS file was successfully produced:
[2025-10-12 11:20:28] -rw------- 1 boinc boinc 193995063 Oct 12 11:19 shared/HITS.pool.root.1
[2025-10-12 11:20:28]  *** Contents of shared directory: ***
[2025-10-12 11:20:28] total 407776
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc 222040219 Oct 12 10:08 ATLAS.root_0
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:08 input.tar.gz
[2025-10-12 11:20:28] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:08 start_atlas.sh
[2025-10-12 11:20:28] -rw------- 1 boinc boinc 193995063 Oct 12 11:19 HITS.pool.root.1
[2025-10-12 11:20:28] -rw------- 1 boinc boinc    921600 Oct 12 11:20 result.tar.gz
11:20:30 (1053175): run_atlas exited; CPU time 16087.435380
11:20:30 (1053175): called boinc_finish(0)

</stderr_txt>
]]>

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