Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:29:15 (2726954): wrapper (7.7.26015): starting
19:29:15 (2726954): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:29:15] Arguments: --nthreads 8
[2025-10-11 19:29:15] Threads: 8
[2025-10-11 19:29:15] Checking for CVMFS
[2025-10-11 19:29:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:29:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:29:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:29:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:29:17] 2.13.2.0 7534 76558 120488 151600 2 392 29825167 40960001 32092 16776704 0 459266344 99.772 263853293 44640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:29:17] CVMFS is ok
[2025-10-11 19:29:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:29:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:29:17] Further information can be found at the LHC@home message board.
[2025-10-11 19:29:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:29:17] Checking for apptainer binary...
[2025-10-11 19:29:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:29:17] Running /usr/bin/apptainer --version
[2025-10-11 19:29:17] apptainer version 1.4.3-1.el9
[2025-10-11 19:29:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:29:18] c-208-39.aglt2.org
[2025-10-11 19:29:18] apptainer works
[2025-10-11 19:29:18] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:29:18] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:29:18] Starting ATLAS job with PandaID=6838603687
[2025-10-11 19:29:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:55:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:55:48] 2025-10-12 00:54:53,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838603687/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:55:48] 2025-10-12 00:54:53,016 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838603687/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:55:48] 2025-10-12 00:54:53,016 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-11 20:55:48] 2025-10-12 00:54:53,016 | WARNING  | maxPSS not found in memory monitor output
[2025-10-11 20:55:48] 2025-10-12 00:54:53,242 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:55:48] 2025-10-12 00:54:53,907 | INFO     | number of running child processes to parent process 2759298: 1
[2025-10-11 20:55:48] 2025-10-12 00:54:53,930 | INFO     | maximum number of monitored processes: 7
[2025-10-11 20:55:48] 2025-10-12 00:54:54,733 | INFO     | time since job start (5067s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:54:56,435 | INFO     | monitor loop #345: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:54:56,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:54:56,746 | INFO     | time since job start (5069s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:54:58,756 | INFO     | time since job start (5071s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:54:58,941 | INFO     | monitor loop #346: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:54:58,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:00,762 | INFO     | time since job start (5073s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:01,446 | INFO     | monitor loop #347: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:01,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:02,769 | INFO     | time since job start (5075s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:03,951 | INFO     | monitor loop #348: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:03,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:04,779 | INFO     | time since job start (5077s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:06,456 | INFO     | monitor loop #349: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:06,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:06,786 | INFO     | time since job start (5079s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:08,792 | INFO     | time since job start (5081s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:08,961 | INFO     | monitor loop #350: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:08,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:11,029 | INFO     | PID=2737355 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:55:48] 2025-10-12 00:55:11,029 | INFO     | .. there are 29 such processes running
[2025-10-11 20:55:48] 2025-10-12 00:55:11,471 | INFO     | monitor loop #351: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:11,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:12,030 | INFO     | time since job start (5085s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:13,976 | INFO     | monitor loop #352: job 0:6838603687 is in state 'finished'
[2025-10-11 20:55:48] 2025-10-12 00:55:13,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:55:48] 2025-10-12 00:55:14,048 | INFO     | time since job start (5087s) is within the limit (172800.0s)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,090 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 20:55:48] 2025-10-12 00:55:15,095 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3670.1579140625004
[2025-10-11 20:55:48] 2025-10-12 00:55:15,107 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838603687/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,108 | INFO     | extracted standard info from prmon json
[2025-10-11 20:55:48] 2025-10-12 00:55:15,108 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:55:48] 2025-10-12 00:55:15,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:55:48] 2025-10-12 00:55:15,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:55:48] 2025-10-12 00:55:15,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:55:48] 2025-10-12 00:55:15,109 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:55:48] 2025-10-12 00:55:15,109 | INFO     | sum of square deviations: 125626544.37837836
[2025-10-11 20:55:48] 2025-10-12 00:55:15,109 | INFO     | sum of deviations: -3035391975.7027044
[2025-10-11 20:55:48] 2025-10-12 00:55:15,109 | INFO     | mean x: 1760228089.5405405
[2025-10-11 20:55:48] 2025-10-12 00:55:15,109 | INFO     | mean y: 2556938.0675675673
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | -- intersect: 42533235823.13798
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | intersect: 42533235823.13798
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | chi2: 0.030739241860075237
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | -- intersect: 42533235823.13798
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | current memory leak: -24.16 B/s (using 74 data points, chi2=0.03)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | could have reported an average CPU frequency of 3703 MHz (6 samples)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | ..............................
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . Timing measurements:
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . get job = 0 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . initial setup = 6 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . payload setup = 39 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . stage-in = 0 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . payload execution = 4952 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . stage-out = 1 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | . log creation = 0 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,110 | INFO     | ..............................
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | 
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | job summary report
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | --------------------------------------------------
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | PanDA job id: 6838603687
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | task id: 46676269
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | errors: (none)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | pilot state: finished 
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | transexitcode: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | exeerrorcode: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | exeerrordiag: 
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | exitcode: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:15,219 | INFO     | exitmsg: OK
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | cpuconsumptiontime: 24441 s
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | nevents: 400
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | neventsw: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | pid: 2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | pgrp: 2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | corecount: 8
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | event service: False
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | sizes: {0: 2348857, 1: 2348857, 11: 2348885, 22: 2348913, 32: 2349203, 33: 2349231, 4995: 2375774, 4998: 2384772, 5000: 2384828, 5024: 2385022}
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | --------------------------------------------------
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | 
[2025-10-11 20:55:48] 2025-10-12 00:55:15,220 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | job 6838603687 has completed (purged errors)
[2025-10-11 20:55:48] 2025-10-12 00:55:15,260 | INFO     | overall cleanup function is called
[2025-10-11 20:55:48] 2025-10-12 00:55:16,267 | INFO     | --- collectZombieJob: --- 10, [2759298]
[2025-10-11 20:55:48] 2025-10-12 00:55:16,267 | INFO     | zombie collector waiting for pid 2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:16,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:55:48] 2025-10-12 00:55:16,267 | INFO     | collected zombie processes
[2025-10-11 20:55:48] 2025-10-12 00:55:16,267 | INFO     | will attempt to kill all subprocesses of pid=2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:17,398 | INFO     | process IDs to be killed: [2759298] (in reverse order)
[2025-10-11 20:55:48] 2025-10-12 00:55:17,735 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:55:48] 2025-10-12 00:55:17,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:55:48] 2025-10-12 00:55:17,788 | INFO     | did not find any defunct processes belonging to 2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:17,817 | INFO     | did not find any defunct processes belonging to 2759298
[2025-10-11 20:55:48] 2025-10-12 00:55:17,817 | INFO     | ready for new job
[2025-10-11 20:55:48] 2025-10-12 00:55:17,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:55:48] 2025-10-12 00:55:17,819 | INFO     | ***************************************
[2025-10-11 20:55:48] 2025-10-12 00:55:17,819 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:55:48] 2025-10-12 00:55:17,819 | INFO     | ***************************************
[2025-10-11 20:55:48] 2025-10-12 00:55:17,819 | INFO     | 
[2025-10-11 20:55:48] 2025-10-12 00:55:17,824 | INFO     | architecture information:
[2025-10-11 20:55:48] 2025-10-12 00:55:17,824 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:55:48] 2025-10-12 00:55:17,960 | INFO     | cat /etc/os-release:
[2025-10-11 20:55:48] NAME="CentOS Linux"
[2025-10-11 20:55:48] VERSION="7 (Core)"
[2025-10-11 20:55:48] ID="centos"
[2025-10-11 20:55:48] ID_LIKE="rhel fedora"
[2025-10-11 20:55:48] VERSION_ID="7"
[2025-10-11 20:55:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:55:48] ANSI_COLOR="0;31"
[2025-10-11 20:55:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:55:48] HOME_URL="https://www.centos.org/"
[2025-10-11 20:55:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:55:48] 
[2025-10-11 20:55:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:55:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:55:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:55:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:55:48] 
[2025-10-11 20:55:48] 2025-10-12 00:55:17,961 | INFO     | ***************************************
[2025-10-11 20:55:48] 2025-10-12 00:55:18,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | INFO     | sufficient remaining disk space (170079027200 B)
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | INFO     | update_server=False
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:55:48] 2025-10-12 00:55:18,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:55:48] 2025-10-12 00:55:18,495 | INFO     | aborting loop
[2025-10-11 20:55:48] 2025-10-12 00:55:19,091 | INFO     | all data control threads have been joined
[2025-10-11 20:55:48] 2025-10-12 00:55:19,287 | INFO     | all payload control threads have been joined
[2025-10-11 20:55:48] 2025-10-12 00:55:19,356 | INFO     | all job control threads have been joined
[2025-10-11 20:55:48] 2025-10-12 00:55:19,500 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:19,500 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:19,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:55:48] 2025-10-12 00:55:19,681 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:19,728 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:19,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:55:48] 2025-10-12 00:55:19,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,097 | INFO     | [data] control thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,141 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:55:48] 2025-10-12 00:55:20,292 | INFO     | [payload] control thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,301 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,333 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,362 | INFO     | [job] control thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,418 | INFO     | [job] validate thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:20,562 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:21,240 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:21,571 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:23,886 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:55:48] 2025-10-12 00:55:36,151 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:55:48] 2025-10-12 00:55:37,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697517033280)>', '<ExcThread(monitor, started 140697235588864)>']
[2025-10-11 20:55:48] 2025-10-12 00:55:42,257 | INFO     | all workflow threads have been joined
[2025-10-11 20:55:48] 2025-10-12 00:55:42,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:55:48] 2025-10-12 00:55:42,257 | INFO     | traces error code: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:42,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:55:48] 2025-10-12 00:55:47,777 | INFO     | PID=2737355 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:55:48] 2025-10-12 00:55:47,777 | INFO     | .. there are 30 such processes running
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 20:55:48] 2025-10-12 00:55:47,778 | INFO     | [monitor] control thread has ended
[2025-10-11 20:55:48] 2025-10-12 00:55:47,904 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:55:48] 2025-10-12 00:55:47,955 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:55:48] 2025-10-12 00:55:48,031 [wrapper] pilotpid: 2737355
[2025-10-11 20:55:48] 2025-10-12 00:55:48,055 [wrapper] Pilot exit status: 0
[2025-10-11 20:55:48] 2025-10-12 00:55:48,140 [wrapper] pandaids: 6838603687
[2025-10-11 20:55:48] 2025-10-12 00:55:48,254 [wrapper] cleanup supervisor_pilot 3080936 2737356
[2025-10-11 20:55:48] 2025-10-12 00:55:48,281 [wrapper] Test setup, not cleaning
[2025-10-11 20:55:48] 2025-10-12 00:55:48,284 [wrapper] apfmon messages muted
[2025-10-11 20:55:48] 2025-10-12 00:55:48,319 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:55:48] 2025-10-12 00:55:48,346 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:55:48]  *** Error codes and diagnostics ***
[2025-10-11 20:55:48]     "exeErrorCode": 0,
[2025-10-11 20:55:48]     "exeErrorDiag": "",
[2025-10-11 20:55:48]     "pilotErrorCode": 0,
[2025-10-11 20:55:48]     "pilotErrorDiag": "",
[2025-10-11 20:55:48]  *** Listing of results directory ***
[2025-10-11 20:55:48] total 411688
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 11:05 pilot3.tar.gz
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 11:13 queuedata.json
[2025-10-11 20:55:48] -rwx------. 1 boincer umatlas     36292 Oct 11 11:13 runpilot2-wrapper.sh
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:55:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:29 run_atlas
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:29 job.xml
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas 220935491 Oct 11 19:29 EVNT.46676267._002412.pool.root.1
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:29 start_atlas.sh
[2025-10-11 20:55:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:29 shared
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 19:29 input.tar.gz
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:29 boinc_lockfile
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:29 pandaJob.out
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas    975528 Oct 11 19:30 agis_schedconf.cvmfs.json
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:30 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:55:48] drwx------. 5 boincer umatlas      4096 Oct 11 19:30 pilot3
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas 194686657 Oct 11 20:54 HITS.46676269._060108.pool.root.1
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas       530 Oct 11 20:54 boinc_task_state.xml
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas      1048 Oct 11 20:54 memory_monitor_summary.json
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas    326780 Oct 11 20:54 log.46676269._060108.job.log.tgz.1
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas        95 Oct 11 20:54 pilot_heartbeat.json
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas      7807 Oct 11 20:55 heartbeat.json
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas      7173 Oct 11 20:55 init_data.xml
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas       893 Oct 11 20:55 pilotlog.txt
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 20:55 boinc_mmap_file
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas    700025 Oct 11 20:55 log.46676269._060108.job.log.1
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas       357 Oct 11 20:55 output.list
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas       620 Oct 11 20:55 runtime_log
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas   1044480 Oct 11 20:55 result.tar.gz
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas        27 Oct 11 20:55 wrapper_checkpoint.txt
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 20:55 runtime_log.err
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas       657 Oct 11 20:55 E21KDmrSqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmS9RMDmwTvngm.diag
[2025-10-11 20:55:48] -rw-r--r--. 1 boincer umatlas     22466 Oct 11 20:55 stderr.txt
[2025-10-11 20:55:48] HITS file was successfully produced:
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas 194686657 Oct 11 20:54 shared/HITS.pool.root.1
[2025-10-11 20:55:48]  *** Contents of shared directory: ***
[2025-10-11 20:55:48] total 407484
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas 220935491 Oct 11 19:29 ATLAS.root_0
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:29 start_atlas.sh
[2025-10-11 20:55:48] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 19:29 input.tar.gz
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas 194686657 Oct 11 20:54 HITS.pool.root.1
[2025-10-11 20:55:48] -rw-------. 1 boincer umatlas   1044480 Oct 11 20:55 result.tar.gz
20:55:50 (2726954): run_atlas exited; CPU time 24589.033906
20:55:50 (2726954): called boinc_finish(0)

</stderr_txt>
]]>

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