Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:23:01 (2008716): wrapper (7.7.26015): starting
01:23:01 (2008716): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 01:23:01] Arguments: --nthreads 3
[2025-10-12 01:23:01] Threads: 3
[2025-10-12 01:23:01] Checking for CVMFS
[2025-10-12 01:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:23:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:23:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:23:01] 2.9.2.0 962579 3458 82592 151600 2 56 2646254 36864001 0 130560 0 2757181 99.990 117502 1093 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 01:23:01] CVMFS is ok
[2025-10-12 01:23:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:23:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:23:01] Further information can be found at the LHC@home message board.
[2025-10-12 01:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:23:01] Checking for apptainer binary...
[2025-10-12 01:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:23:01] Running /usr/bin/apptainer --version
[2025-10-12 01:23:01] apptainer version 1.4.1-1.1
[2025-10-12 01:23:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:23:01] thA330b
[2025-10-12 01:23:01] apptainer works
[2025-10-12 01:23:01] Set ATHENA_PROC_NUMBER=3
[2025-10-12 01:23:01] Set ATHENA_CORE_NUMBER=3
[2025-10-12 01:23:01] Starting ATLAS job with PandaID=6838634824
[2025-10-12 01:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:43:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:43:18] 2025-10-12 00:42:56,038 | INFO     | did not find any defunct processes belonging to 2018860
[2025-10-12 02:43:18] 2025-10-12 00:42:56,038 | INFO     | ready for new job
[2025-10-12 02:43:18] 2025-10-12 00:42:56,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | ***************************************
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | ***************************************
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | 
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | architecture information:
[2025-10-12 02:43:18] 2025-10-12 00:42:56,039 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:43:18] 2025-10-12 00:42:56,048 | INFO     | cat /etc/os-release:
[2025-10-12 02:43:18] NAME="CentOS Linux"
[2025-10-12 02:43:18] VERSION="7 (Core)"
[2025-10-12 02:43:18] ID="centos"
[2025-10-12 02:43:18] ID_LIKE="rhel fedora"
[2025-10-12 02:43:18] VERSION_ID="7"
[2025-10-12 02:43:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:43:18] ANSI_COLOR="0;31"
[2025-10-12 02:43:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:43:18] HOME_URL="https://www.centos.org/"
[2025-10-12 02:43:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:43:18] 
[2025-10-12 02:43:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:43:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:43:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:43:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:43:18] 
[2025-10-12 02:43:18] 2025-10-12 00:42:56,048 | INFO     | ***************************************
[2025-10-12 02:43:18] 2025-10-12 00:42:56,551 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | INFO     | sufficient remaining disk space (259103129600 B)
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | INFO     | update_server=False
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 02:43:18] 2025-10-12 00:42:56,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:43:18] 2025-10-12 00:42:56,565 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:43:18] 2025-10-12 00:42:56,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:43:18] 2025-10-12 00:42:56,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:43:18] 2025-10-12 00:42:57,361 | INFO     | all data control threads have been joined
[2025-10-12 02:43:18] 2025-10-12 00:42:57,371 | WARNING  | process 2018860 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 02:43:18] 2025-10-12 00:42:57,405 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:43:18] 2025-10-12 00:42:57,449 | INFO     | number of running child processes to parent process 2018860: 1
[2025-10-12 02:43:18] 2025-10-12 00:42:57,449 | INFO     | maximum number of monitored processes: 6
[2025-10-12 02:43:18] 2025-10-12 00:42:57,449 | INFO     | aborting job monitoring since job object (job id=6838634824) has expired
[2025-10-12 02:43:18] 2025-10-12 00:42:57,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:43:18] 2025-10-12 00:42:57,449 | INFO     | will abort loop
[2025-10-12 02:43:18] 2025-10-12 00:42:57,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:43:18] 2025-10-12 00:42:57,515 | INFO     | all job control threads have been joined
[2025-10-12 02:43:18] 2025-10-12 00:42:57,518 | INFO     | all payload control threads have been joined
[2025-10-12 02:43:18] 2025-10-12 00:42:57,567 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:57,570 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:57,838 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:43:18] 2025-10-12 00:42:58,058 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,366 | INFO     | [data] control thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,455 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,520 | INFO     | [job] control thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,522 | INFO     | [payload] control thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,670 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,673 | INFO     | [job] validate thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,730 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:58,731 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:59,102 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:42:59,493 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:43:02,018 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:43:07,302 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:43:18] 2025-10-12 00:43:08,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:43:18] 2025-10-12 00:43:12,902 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:43:18] 2025-10-12 00:43:12,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218276542272)>', '<ExcThread(monitor, started 140217621128960)>']
[2025-10-12 02:43:18] 2025-10-12 00:43:13,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:43:18] 2025-10-12 00:43:13,654 | INFO     | [monitor] control thread has ended
[2025-10-12 02:43:18] 2025-10-12 00:43:17,940 | INFO     | all workflow threads have been joined
[2025-10-12 02:43:18] 2025-10-12 00:43:17,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:43:18] 2025-10-12 00:43:17,941 | INFO     | traces error code: 0
[2025-10-12 02:43:18] 2025-10-12 00:43:17,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:43:18] 2025-10-12 00:43:17,991 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:43:18] 2025-10-12 00:43:17,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:43:18] 2025-10-12 00:43:17,996 [wrapper] pilotpid: 2012430
[2025-10-12 02:43:18] 2025-10-12 00:43:17,998 [wrapper] Pilot exit status: 0
[2025-10-12 02:43:18] 2025-10-12 00:43:18,005 [wrapper] pandaids: 6838634824
[2025-10-12 02:43:18] 2025-10-12 00:43:18,022 [wrapper] cleanup supervisor_pilot 2031186 2012431
[2025-10-12 02:43:18] 2025-10-12 00:43:18,025 [wrapper] Test setup, not cleaning
[2025-10-12 02:43:18] 2025-10-12 00:43:18,027 [wrapper] apfmon messages muted
[2025-10-12 02:43:18] 2025-10-12 00:43:18,029 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:43:18] 2025-10-12 00:43:18,031 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:43:18]  *** Error codes and diagnostics ***
[2025-10-12 02:43:18]     "exeErrorCode": 0,
[2025-10-12 02:43:18]     "exeErrorDiag": "",
[2025-10-12 02:43:18]     "pilotErrorCode": 0,
[2025-10-12 02:43:18]     "pilotErrorDiag": "",
[2025-10-12 02:43:18]  *** Listing of results directory ***
[2025-10-12 02:43:18] total 406488
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:33 pilot3.tar.gz
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:37 queuedata.json
[2025-10-12 02:43:18] -rwx------ 1 boinc boinc     36292 Oct 11 19:38 runpilot2-wrapper.sh
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc       100 Oct 12 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:43:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 01:23 run_atlas
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc       105 Oct 12 01:23 job.xml
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc 221201731 Oct 12 01:23 EVNT.46676267._002495.pool.root.1
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc    569684 Oct 12 01:23 input.tar.gz
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:23 start_atlas.sh
[2025-10-12 02:43:18] drwxrwx--x 2 boinc boinc      4096 Oct 12 01:23 shared
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:23 boinc_setup_complete
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc      6439 Oct 12 01:23 init_data.xml
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:23 boinc_lockfile
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc      2549 Oct 12 01:23 pandaJob.out
[2025-10-12 02:43:18] -rw------- 1 boinc boinc    975528 Oct 12 01:23 agis_schedconf.cvmfs.json
[2025-10-12 02:43:18] -rw------- 1 boinc boinc   1560580 Oct 12 01:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:43:18] drwx------ 5 boinc boinc      4096 Oct 12 01:23 pilot3
[2025-10-12 02:43:18] -rw------- 1 boinc boinc        95 Oct 12 02:42 pilot_heartbeat.json
[2025-10-12 02:43:18] -rw------- 1 boinc boinc 189211942 Oct 12 02:42 HITS.46676269._062119.pool.root.1
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc       529 Oct 12 02:42 boinc_task_state.xml
[2025-10-12 02:43:18] -rw------- 1 boinc boinc      1017 Oct 12 02:42 memory_monitor_summary.json
[2025-10-12 02:43:18] -rw------- 1 boinc boinc    262725 Oct 12 02:42 log.46676269._062119.job.log.tgz.1
[2025-10-12 02:43:18] -rw------- 1 boinc boinc      7763 Oct 12 02:42 heartbeat.json
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:43 boinc_mmap_file
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc        27 Oct 12 02:43 wrapper_checkpoint.txt
[2025-10-12 02:43:18] -rw------- 1 boinc boinc      5152 Oct 12 02:43 pilotlog.txt
[2025-10-12 02:43:18] -rw------- 1 boinc boinc    704649 Oct 12 02:43 log.46676269._062119.job.log.1
[2025-10-12 02:43:18] -rw------- 1 boinc boinc       357 Oct 12 02:43 output.list
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:43 runtime_log
[2025-10-12 02:43:18] -rw------- 1 boinc boinc    983040 Oct 12 02:43 result.tar.gz
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc      8782 Oct 12 02:43 runtime_log.err
[2025-10-12 02:43:18] -rw------- 1 boinc boinc       659 Oct 12 02:43 ZLnLDmvisR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ8gNDmEMqXyn.diag
[2025-10-12 02:43:18] -rw-r--r-- 1 boinc boinc     10290 Oct 12 02:43 stderr.txt
[2025-10-12 02:43:18] HITS file was successfully produced:
[2025-10-12 02:43:18] -rw------- 1 boinc boinc 189211942 Oct 12 02:42 shared/HITS.pool.root.1
[2025-10-12 02:43:18]  *** Contents of shared directory: ***
[2025-10-12 02:43:18] total 402344
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc 221201731 Oct 12 01:23 ATLAS.root_0
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc    569684 Oct 12 01:23 input.tar.gz
[2025-10-12 02:43:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:23 start_atlas.sh
[2025-10-12 02:43:18] -rw------- 1 boinc boinc 189211942 Oct 12 02:42 HITS.pool.root.1
[2025-10-12 02:43:18] -rw------- 1 boinc boinc    983040 Oct 12 02:43 result.tar.gz
02:43:19 (2008716): run_atlas exited; CPU time 13717.205803
02:43:19 (2008716): called boinc_finish(0)

</stderr_txt>
]]>

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