Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:41:59 (3638773): wrapper (7.7.26015): starting
07:41:59 (3638773): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:41:59] Arguments: --nthreads 4
[2025-10-13 07:41:59] Threads: 4
[2025-10-13 07:41:59] Checking for CVMFS
[2025-10-13 07:41:59] No cvmfs_config command found, will try listing directly
[2025-10-13 07:41:59] CVMFS is ok
[2025-10-13 07:41:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:41:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:41:59] Further information can be found at the LHC@home message board.
[2025-10-13 07:41:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:41:59] Checking for apptainer binary...
[2025-10-13 07:41:59] which: no apptainer in ((null))
[2025-10-13 07:41:59] apptainer is not installed, using version from CVMFS
[2025-10-13 07:41:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:41:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-13 07:41:59] apptainer works
[2025-10-13 07:41:59] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:41:59] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:41:59] Starting ATLAS job with PandaID=6838773078
[2025-10-13 07:41:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:12:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:12:20] 2025-10-13 08:08:18,612 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:12:20] 2025-10-13 08:08:18,684 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2758.6151015625
[2025-10-13 10:12:20] 2025-10-13 08:08:18,718 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6838773078/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,719 | INFO     | extracted standard info from prmon json
[2025-10-13 10:12:20] 2025-10-13 08:08:18,720 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:12:20] 2025-10-13 08:08:18,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:12:20] 2025-10-13 08:08:18,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:12:20] 2025-10-13 08:08:18,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:12:20] 2025-10-13 08:08:18,723 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:12:20] 2025-10-13 08:08:18,723 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,724 | INFO     | sum of deviations: 13927167053.999996
[2025-10-13 10:12:20] 2025-10-13 08:08:18,724 | INFO     | mean x: 1760338498.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,724 | INFO     | mean y: 2321806.4475524477
[2025-10-13 10:12:20] 2025-10-13 08:08:18,724 | INFO     | -- intersect: -27036867971.42709
[2025-10-13 10:12:20] 2025-10-13 08:08:18,725 | INFO     | intersect: -27036867971.42709
[2025-10-13 10:12:20] 2025-10-13 08:08:18,725 | INFO     | chi2: 1.3278937340852
[2025-10-13 10:12:20] 2025-10-13 08:08:18,725 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | sum of deviations: 13445063985.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | mean x: 1760338345.5
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | mean y: 2321005.782608696
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | -- intersect: -29042328826.623222
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | intersect: -29042328826.623222
[2025-10-13 10:12:20] 2025-10-13 08:08:18,726 | INFO     | chi2: 1.3293652550853563
[2025-10-13 10:12:20] 2025-10-13 08:08:18,727 | INFO     | current chi2=1.3293652550853563 (change=-0.11081617168485977 %)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,727 | INFO     | right removable region: 137
[2025-10-13 10:12:20] 2025-10-13 08:08:18,727 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | sum of deviations: -4182249639.4999995
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | mean x: 1760338650.5
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | mean y: 2351348.9782608696
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | -- intersect: 9037042256.585596
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | intersect: 9037042256.585596
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | chi2: 0.006831383716834322
[2025-10-13 10:12:20] 2025-10-13 08:08:18,728 | INFO     | current chi2=0.006831383716834322 (change=99.48554740929322 %)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,729 | INFO     | sum of square deviations: 729472282.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,729 | INFO     | sum of deviations: -4325256301.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,729 | INFO     | mean x: 1760338803.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,729 | INFO     | mean y: 2351593.338345865
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | -- intersect: 10439919527.647532
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | intersect: 10439919527.647532
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | chi2: 0.005859415587089115
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | current chi2=0.005859415587089115 (change=14.227983232006459 %)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | left removable region: 20
[2025-10-13 10:12:20] 2025-10-13 08:08:18,730 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | sum of deviations: -3284874216.9999995
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | mean x: 1760338925.0
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | mean y: 2350088.512820513
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | -- intersect: 11646579533.056337
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | intersect: 11646579533.056337
[2025-10-13 10:12:20] 2025-10-13 08:08:18,731 | INFO     | chi2: 0.005477270992272098
[2025-10-13 10:12:20] 2025-10-13 08:08:18,732 | INFO     | -- intersect: 11646579533.056337
[2025-10-13 10:12:20] 2025-10-13 08:08:18,732 | INFO     | current memory leak: -6.61 B/s (using 117 data points, chi2=0.01)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,732 | INFO     | could have reported an average CPU frequency of 2760 MHz (8 samples)
[2025-10-13 10:12:20] 2025-10-13 08:08:18,732 | INFO     | ..............................
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . Timing measurements:
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . get job = 0 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . initial setup = 1 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . payload setup = 8 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . stage-in = 0 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . payload execution = 8722 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . stage-out = 0 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | . log creation = 0 s
[2025-10-13 10:12:20] 2025-10-13 08:08:18,733 | INFO     | ..............................
[2025-10-13 10:12:20] 2025-10-13 08:08:19,169 | INFO     | PID=3659063 has CPU usage=22.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,170 | INFO     | .. there are 7 such processes running
[2025-10-13 10:12:20] 2025-10-13 08:08:19,177 | INFO     | 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | job summary report
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | --------------------------------------------------
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | PanDA job id: 6838773078
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | task id: 46676269
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | errors: (none)
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | pilot state: finished 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | transexitcode: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | exeerrorcode: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | exeerrordiag: 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,178 | INFO     | exitcode: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | exitmsg: OK
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | cpuconsumptiontime: 33324 s
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | nevents: 400
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | neventsw: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | pid: 3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | pgrp: 3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | corecount: 4
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | event service: False
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 8735: 2377608, 8736: 2377607, 8738: 2386685, 8740: 2386869, 8748: 2387063}
[2025-10-13 10:12:20] 2025-10-13 08:08:19,179 | INFO     | --------------------------------------------------
[2025-10-13 10:12:20] 2025-10-13 08:08:19,180 | INFO     | 
[2025-10-13 10:12:20] 2025-10-13 08:08:19,180 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-10-13 10:12:20] 2025-10-13 08:08:19,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:12:20] 2025-10-13 08:08:19,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:12:20] 2025-10-13 08:08:19,214 | INFO     | job 6838773078 has completed (purged errors)
[2025-10-13 10:12:20] 2025-10-13 08:08:19,214 | INFO     | overall cleanup function is called
[2025-10-13 10:12:20] 2025-10-13 08:08:20,223 | INFO     | --- collectZombieJob: --- 10, [3704165]
[2025-10-13 10:12:20] 2025-10-13 08:08:20,224 | INFO     | zombie collector waiting for pid 3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:20,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:12:20] 2025-10-13 08:08:20,224 | INFO     | collected zombie processes
[2025-10-13 10:12:20] 2025-10-13 08:08:20,224 | INFO     | will attempt to kill all subprocesses of pid=3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:20,890 | INFO     | process IDs to be killed: [3704165] (in reverse order)
[2025-10-13 10:12:20] 2025-10-13 08:08:21,138 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:12:20] 2025-10-13 08:08:21,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:12:20] 2025-10-13 08:08:21,168 | INFO     | did not find any defunct processes belonging to 3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:21,192 | INFO     | did not find any defunct processes belonging to 3704165
[2025-10-13 10:12:20] 2025-10-13 08:08:21,192 | INFO     | ready for new job
[2025-10-13 10:12:20] 2025-10-13 08:08:21,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:12:20] 2025-10-13 08:08:21,195 | INFO     | ***************************************
[2025-10-13 10:12:20] 2025-10-13 08:08:21,195 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:12:20] 2025-10-13 08:08:21,195 | INFO     | ***************************************
[2025-10-13 10:12:20] 2025-10-13 08:08:21,195 | INFO     | 
[2025-10-13 10:12:20] 2025-10-13 08:08:21,203 | INFO     | architecture information:
[2025-10-13 10:12:20] 2025-10-13 08:08:21,204 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:12:20] 2025-10-13 08:08:21,228 | INFO     | cat /etc/os-release:
[2025-10-13 10:12:20] NAME="CentOS Linux"
[2025-10-13 10:12:20] VERSION="7 (Core)"
[2025-10-13 10:12:20] ID="centos"
[2025-10-13 10:12:20] ID_LIKE="rhel fedora"
[2025-10-13 10:12:20] VERSION_ID="7"
[2025-10-13 10:12:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:12:20] ANSI_COLOR="0;31"
[2025-10-13 10:12:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:12:20] HOME_URL="https://www.centos.org/"
[2025-10-13 10:12:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:12:20] 
[2025-10-13 10:12:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:12:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:12:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:12:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:12:20] 
[2025-10-13 10:12:20] 2025-10-13 08:08:21,229 | INFO     | ***************************************
[2025-10-13 10:12:20] 2025-10-13 08:08:21,732 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-10-13 10:12:20] 2025-10-13 08:08:21,756 | INFO     | sufficient remaining disk space (3339448221696 B)
[2025-10-13 10:12:20] 2025-10-13 08:08:21,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:12:20] 2025-10-13 08:08:21,757 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:12:20] 2025-10-13 08:08:21,757 | INFO     | update_server=False
[2025-10-13 10:12:20] 2025-10-13 08:08:21,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:12:20] 2025-10-13 08:08:21,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:12:20] 2025-10-13 08:08:21,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:12:20] 2025-10-13 08:08:21,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:12:20] 2025-10-13 08:08:21,843 | INFO     | aborting loop
[2025-10-13 10:12:20] 2025-10-13 08:08:22,722 | INFO     | all data control threads have been joined
[2025-10-13 10:12:20] 2025-10-13 08:08:22,762 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:22,844 | INFO     | all job control threads have been joined
[2025-10-13 10:12:20] 2025-10-13 08:08:22,848 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:22,894 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:22,921 | INFO     | all payload control threads have been joined
[2025-10-13 10:12:20] 2025-10-13 08:08:23,019 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,300 | INFO     | [job] validate thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,384 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,541 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,567 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,568 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,728 | INFO     | [data] control thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,764 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:12:20] 2025-10-13 08:08:23,849 | INFO     | [job] control thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:23,926 | INFO     | [payload] control thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:24,848 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:25,764 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:26,505 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:12:20] 2025-10-13 08:08:32,232 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:12:20] 2025-10-13 08:08:33,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:12:20] 2025-10-13 08:08:34,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23229751912256)>', '<ExcThread(monitor, started 23229515138816)>']
[2025-10-13 10:12:20] 2025-10-13 08:08:39,863 | INFO     | all workflow threads have been joined
[2025-10-13 10:12:20] 2025-10-13 08:08:39,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:12:20] 2025-10-13 08:08:39,864 | INFO     | traces error code: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:39,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:12:20] 2025-10-13 08:08:51,878 | INFO     | PID=3659063 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:12:20] 2025-10-13 08:08:51,879 | INFO     | .. there are 7 such processes running
[2025-10-13 10:12:20] 2025-10-13 08:08:51,879 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:12:20] 2025-10-13 08:08:51,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:12:20] 2025-10-13 08:08:51,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:12:20] 2025-10-13 08:08:51,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:12:20] 2025-10-13 08:08:51,880 | INFO     | [monitor] control thread has ended
[2025-10-13 10:12:20] 2025-10-13 08:08:52,051 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:12:20] 2025-10-13 08:08:52,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:12:20] 2025-10-13 08:08:52,058 [wrapper] pilotpid: 3659063
[2025-10-13 10:12:20] 2025-10-13 08:08:52,062 [wrapper] Pilot exit status: 0
[2025-10-13 10:12:20] 2025-10-13 08:08:52,073 [wrapper] pandaids: 6838773078
[2025-10-13 10:12:20] 2025-10-13 08:08:52,242 [wrapper] cleanup supervisor_pilot 3979375 3659064
[2025-10-13 10:12:20] 2025-10-13 08:08:52,245 [wrapper] Test setup, not cleaning
[2025-10-13 10:12:20] 2025-10-13 08:08:52,249 [wrapper] apfmon messages muted
[2025-10-13 10:12:20] 2025-10-13 08:08:52,252 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:12:20] 2025-10-13 08:08:52,255 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:12:20]  *** Error codes and diagnostics ***
[2025-10-13 10:12:20]     "exeErrorCode": 0,
[2025-10-13 10:12:20]     "exeErrorDiag": "",
[2025-10-13 10:12:20]     "pilotErrorCode": 0,
[2025-10-13 10:12:20]     "pilotErrorDiag": "",
[2025-10-13 10:12:20]  *** Listing of results directory ***
[2025-10-13 10:12:20] total 414684
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc    557409 Oct 11 20:14 pilot3.tar.gz
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc      5112 Oct 11 20:19 queuedata.json
[2025-10-13 10:12:20] -rwx------ 1 boinc boinc     36292 Oct 11 20:20 runpilot2-wrapper.sh
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:12:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:41 run_atlas
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:41 job.xml
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc 222040219 Oct 13 07:41 EVNT.46676267._002511.pool.root.1
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc      6686 Oct 13 07:41 init_data.xml
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:41 start_atlas.sh
[2025-10-13 10:12:20] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:41 shared
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc    569680 Oct 13 07:41 input.tar.gz
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:41 boinc_lockfile
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:41 pandaJob.out
[2025-10-13 10:12:20] -rw------- 1 boinc boinc    973230 Oct 13 07:42 agis_schedconf.cvmfs.json
[2025-10-13 10:12:20] -rw------- 1 boinc boinc   1560580 Oct 13 07:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:12:20] drwx------ 5 boinc boinc      4096 Oct 13 07:42 pilot3
[2025-10-13 10:12:20] -rw------- 1 boinc boinc 195580169 Oct 13 10:07 HITS.46676269._062508.pool.root.1
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:07 boinc_task_state.xml
[2025-10-13 10:12:20] -rw------- 1 boinc boinc      1037 Oct 13 10:08 memory_monitor_summary.json
[2025-10-13 10:12:20] -rw------- 1 boinc boinc    320036 Oct 13 10:08 log.46676269._062508.job.log.tgz.1
[2025-10-13 10:12:20] -rw------- 1 boinc boinc      7781 Oct 13 10:08 heartbeat.json
[2025-10-13 10:12:20] -rw------- 1 boinc boinc       822 Oct 13 10:08 pilotlog.txt
[2025-10-13 10:12:20] -rw------- 1 boinc boinc        95 Oct 13 10:08 pilot_heartbeat.json
[2025-10-13 10:12:20] -rw------- 1 boinc boinc   1234597 Oct 13 10:08 log.46676269._062508.job.log.1
[2025-10-13 10:12:20] -rw------- 1 boinc boinc       357 Oct 13 10:08 output.list
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:08 runtime_log
[2025-10-13 10:12:20] -rw------- 1 boinc boinc   1576960 Oct 13 10:08 result.tar.gz
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc      9084 Oct 13 10:08 runtime_log.err
[2025-10-13 10:12:20] -rw------- 1 boinc boinc       662 Oct 13 10:08 AAyMDmBOtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ChNDmQPjWCn.diag
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc        26 Oct 13 10:12 wrapper_checkpoint.txt
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:12 boinc_mmap_file
[2025-10-13 10:12:20] -rw-r--r-- 1 boinc boinc     20969 Oct 13 10:12 stderr.txt
[2025-10-13 10:12:20] HITS file was successfully produced:
[2025-10-13 10:12:20] -rw------- 1 boinc boinc 195580169 Oct 13 10:07 shared/HITS.pool.root.1
[2025-10-13 10:12:20]  *** Contents of shared directory: ***
[2025-10-13 10:12:20] total 409964
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc 222040219 Oct 13 07:41 ATLAS.root_0
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:41 start_atlas.sh
[2025-10-13 10:12:20] -rw-r--r-- 2 boinc boinc    569680 Oct 13 07:41 input.tar.gz
[2025-10-13 10:12:20] -rw------- 1 boinc boinc 195580169 Oct 13 10:07 HITS.pool.root.1
[2025-10-13 10:12:20] -rw------- 1 boinc boinc   1576960 Oct 13 10:08 result.tar.gz
10:12:21 (3638773): run_atlas exited; CPU time 33848.764727
10:12:21 (3638773): called boinc_finish(0)

</stderr_txt>
]]>

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