Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:13:23 (9090): wrapper (7.7.26015): starting
19:13:23 (9090): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:13:23] Arguments: --nthreads 8
[2025-10-11 19:13:23] Threads: 8
[2025-10-11 19:13:23] Checking for CVMFS
[2025-10-11 19:13:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:13:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:13:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:13:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:13:23] 2.11.2.0 2860 119 54192 151599 0 59 15043831 20275201 1 130560 0 83714 99.979 5321 25338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:13:23] CVMFS is ok
[2025-10-11 19:13:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:13:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:13:23] Further information can be found at the LHC@home message board.
[2025-10-11 19:13:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:13:23] Checking for apptainer binary...
[2025-10-11 19:13:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:13:23] Running /usr/bin/apptainer --version
[2025-10-11 19:13:23] apptainer version 1.3.2-1.el7
[2025-10-11 19:13:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:13:25] c-204-9.aglt2.org
[2025-10-11 19:13:25] apptainer works
[2025-10-11 19:13:25] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:13:25] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:13:25] Starting ATLAS job with PandaID=6838772289
[2025-10-11 19:13:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:15:00]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:15:00] 2025-10-12 01:14:20,457 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:15:00] 2025-10-12 01:14:20,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:15:00] 2025-10-12 01:14:20,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:15:00] 2025-10-12 01:14:20,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:15:00] 2025-10-12 01:14:20,460 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:15:00] 2025-10-12 01:14:20,460 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,461 | INFO     | sum of deviations: -5504980380.000002
[2025-10-11 21:15:00] 2025-10-12 01:14:20,461 | INFO     | mean x: 1760228023.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,461 | INFO     | mean y: 2614468.3898305083
[2025-10-11 21:15:00] 2025-10-12 01:14:20,461 | INFO     | -- intersect: 19023531530.21237
[2025-10-11 21:15:00] 2025-10-12 01:14:20,461 | INFO     | intersect: 19023531530.21237
[2025-10-11 21:15:00] 2025-10-12 01:14:20,462 | INFO     | chi2: 1.6464990243469042
[2025-10-11 21:15:00] 2025-10-12 01:14:20,462 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | sum of deviations: -3791691070.0000076
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | mean x: 1760227871.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | mean y: 2618681.1946902657
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | -- intersect: 14921013528.188044
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | intersect: 14921013528.188044
[2025-10-11 21:15:00] 2025-10-12 01:14:20,463 | INFO     | chi2: 1.6489661934033992
[2025-10-11 21:15:00] 2025-10-12 01:14:20,464 | INFO     | current chi2=1.6489661934033992 (change=-0.14984333546590728 %)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,464 | INFO     | right removable region: 112
[2025-10-11 21:15:00] 2025-10-12 01:14:20,464 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,464 | INFO     | sum of deviations: -24106744634.999973
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | mean x: 1760228176.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | mean y: 2659340.1946902657
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | -- intersect: 94850575643.51993
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | intersect: 94850575643.51993
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | chi2: 0.13663546961653658
[2025-10-11 21:15:00] 2025-10-12 01:14:20,465 | INFO     | current chi2=0.13663546961653658 (change=91.70145456534759 %)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,466 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,466 | INFO     | sum of deviations: -24783666027.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,466 | INFO     | mean x: 1760228328.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,466 | INFO     | mean y: 2661011.777777778
[2025-10-11 21:15:00] 2025-10-12 01:14:20,466 | INFO     | -- intersect: 111694669103.70923
[2025-10-11 21:15:00] 2025-10-12 01:14:20,467 | INFO     | intersect: 111694669103.70923
[2025-10-11 21:15:00] 2025-10-12 01:14:20,467 | INFO     | chi2: 0.08849065008581602
[2025-10-11 21:15:00] 2025-10-12 01:14:20,467 | INFO     | current chi2=0.08849065008581602 (change=35.2359600811104 %)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,467 | INFO     | sum of square deviations: 338804492.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | sum of deviations: -22919722394.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | mean x: 1760228481.0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | mean y: 2655505.980582524
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | -- intersect: 119080026341.23001
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | intersect: 119080026341.23001
[2025-10-11 21:15:00] 2025-10-12 01:14:20,468 | INFO     | chi2: 0.0826507011439004
[2025-10-11 21:15:00] 2025-10-12 01:14:20,469 | INFO     | current chi2=0.0826507011439004 (change=6.59950959367141 %)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,469 | INFO     | left removable region: 30
[2025-10-11 21:15:00] 2025-10-12 01:14:20,469 | INFO     | sum of square deviations: 170944600.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,469 | INFO     | sum of deviations: -14624960541.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,469 | INFO     | mean x: 1760228755.5
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | mean y: 2640204.7926829266
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | -- intersect: 150596903012.1819
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | intersect: 150596903012.1819
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | chi2: 0.06701443730740898
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | -- intersect: 150596903012.1819
[2025-10-11 21:15:00] 2025-10-12 01:14:20,470 | INFO     | current memory leak: -85.55 B/s (using 82 data points, chi2=0.07)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | could have reported an average CPU frequency of 1967 MHz (7 samples)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | ..............................
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . Timing measurements:
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . get job = 0 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . initial setup = 2 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . payload setup = 8 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . stage-in = 0 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,471 | INFO     | . payload execution = 7193 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,472 | INFO     | . stage-out = 0 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,472 | INFO     | . log creation = 0 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,472 | INFO     | ..............................
[2025-10-11 21:15:00] 2025-10-12 01:14:20,563 | INFO     | 
[2025-10-11 21:15:00] 2025-10-12 01:14:20,563 | INFO     | job summary report
[2025-10-11 21:15:00] 2025-10-12 01:14:20,575 | INFO     | --------------------------------------------------
[2025-10-11 21:15:00] 2025-10-12 01:14:20,575 | INFO     | PanDA job id: 6838772289
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | task id: 46676269
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | errors: (none)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | pilot state: finished 
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | transexitcode: 0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | exeerrorcode: 0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,576 | INFO     | exeerrordiag: 
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | exitcode: 0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | exitmsg: OK
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | cpuconsumptiontime: 52829 s
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | nevents: 400
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | neventsw: 0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | pid: 19222
[2025-10-11 21:15:00] 2025-10-12 01:14:20,577 | INFO     | pgrp: 19222
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | corecount: 8
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | event service: False
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7205: 2376428, 7206: 2385426, 7210: 2385482, 7220: 2385804}
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | --------------------------------------------------
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | 
[2025-10-11 21:15:00] 2025-10-12 01:14:20,578 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 21:15:00] 2025-10-12 01:14:20,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:15:00] 2025-10-12 01:14:20,610 | INFO     | job 6838772289 has completed (purged errors)
[2025-10-11 21:15:00] 2025-10-12 01:14:20,611 | INFO     | overall cleanup function is called
[2025-10-11 21:15:00] 2025-10-12 01:14:21,619 | INFO     | --- collectZombieJob: --- 10, [19222]
[2025-10-11 21:15:00] 2025-10-12 01:14:21,619 | INFO     | zombie collector waiting for pid 19222
[2025-10-11 21:15:00] 2025-10-12 01:14:21,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:15:00] 2025-10-12 01:14:21,620 | INFO     | collected zombie processes
[2025-10-11 21:15:00] 2025-10-12 01:14:21,620 | INFO     | will attempt to kill all subprocesses of pid=19222
[2025-10-11 21:15:00] 2025-10-12 01:14:21,715 | INFO     | process IDs to be killed: [19222] (in reverse order)
[2025-10-11 21:15:00] 2025-10-12 01:14:21,777 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:15:00] 2025-10-12 01:14:21,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:15:00] 2025-10-12 01:14:21,782 | INFO     | did not find any defunct processes belonging to 19222
[2025-10-11 21:15:00] 2025-10-12 01:14:21,785 | INFO     | did not find any defunct processes belonging to 19222
[2025-10-11 21:15:00] 2025-10-12 01:14:21,785 | INFO     | ready for new job
[2025-10-11 21:15:00] 2025-10-12 01:14:21,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:15:00] 2025-10-12 01:14:21,787 | INFO     | ***************************************
[2025-10-11 21:15:00] 2025-10-12 01:14:21,787 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:15:00] 2025-10-12 01:14:21,787 | INFO     | ***************************************
[2025-10-11 21:15:00] 2025-10-12 01:14:21,787 | INFO     | 
[2025-10-11 21:15:00] 2025-10-12 01:14:21,787 | INFO     | architecture information:
[2025-10-11 21:15:00] 2025-10-12 01:14:21,788 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:15:00] 2025-10-12 01:14:21,807 | INFO     | cat /etc/os-release:
[2025-10-11 21:15:00] NAME="CentOS Linux"
[2025-10-11 21:15:00] VERSION="7 (Core)"
[2025-10-11 21:15:00] ID="centos"
[2025-10-11 21:15:00] ID_LIKE="rhel fedora"
[2025-10-11 21:15:00] VERSION_ID="7"
[2025-10-11 21:15:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:15:00] ANSI_COLOR="0;31"
[2025-10-11 21:15:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:15:00] HOME_URL="https://www.centos.org/"
[2025-10-11 21:15:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:15:00] 
[2025-10-11 21:15:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:15:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:15:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:15:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:15:00] 
[2025-10-11 21:15:00] 2025-10-12 01:14:21,807 | INFO     | ***************************************
[2025-10-11 21:15:00] 2025-10-12 01:14:22,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 21:15:00] 2025-10-12 01:14:22,330 | INFO     | sufficient remaining disk space (18600689664 B)
[2025-10-11 21:15:00] 2025-10-12 01:14:22,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:15:00] 2025-10-12 01:14:22,331 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:15:00] 2025-10-12 01:14:22,331 | INFO     | update_server=False
[2025-10-11 21:15:00] 2025-10-12 01:14:22,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:15:00] 2025-10-12 01:14:22,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:15:00] 2025-10-12 01:14:22,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:15:00] 2025-10-12 01:14:22,333 | INFO     | aborting loop
[2025-10-11 21:15:00] 2025-10-12 01:14:22,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:15:00] 2025-10-12 01:14:22,798 | INFO     | all payload control threads have been joined
[2025-10-11 21:15:00] 2025-10-12 01:14:23,337 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,338 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,339 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,372 | INFO     | all data control threads have been joined
[2025-10-11 21:15:00] 2025-10-12 01:14:23,414 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,450 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,804 | INFO     | [payload] control thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:23,985 | INFO     | all job control threads have been joined
[2025-10-11 21:15:00] 2025-10-12 01:14:24,349 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,373 | INFO     | [data] control thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,504 | INFO     | [job] validate thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,506 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,506 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,760 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,858 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:24,990 | INFO     | [job] control thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:25,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:15:00] 2025-10-12 01:14:29,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:15:00] 2025-10-12 01:14:53,563 | INFO     | PID=12830 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 21:15:00] 2025-10-12 01:14:53,563 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:15:00] 2025-10-12 01:14:53,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:15:00] 2025-10-12 01:14:53,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:15:00] 2025-10-12 01:14:54,452 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:15:00] 2025-10-12 01:14:55,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182122948416)>', '<ExcThread(monitor, started 140180937758464)>']
[2025-10-11 21:15:00] 2025-10-12 01:14:55,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:15:00] 2025-10-12 01:14:55,574 | INFO     | [monitor] control thread has ended
[2025-10-11 21:15:00] 2025-10-12 01:15:00,523 | INFO     | all workflow threads have been joined
[2025-10-11 21:15:00] 2025-10-12 01:15:00,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:15:00] 2025-10-12 01:15:00,524 | INFO     | traces error code: 0
[2025-10-11 21:15:00] 2025-10-12 01:15:00,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:15:00] 2025-10-12 01:15:00,671 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:15:00] 2025-10-12 01:15:00,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:15:00] 2025-10-12 01:15:00,682 [wrapper] pilotpid: 12830
[2025-10-11 21:15:00] 2025-10-12 01:15:00,687 [wrapper] Pilot exit status: 0
[2025-10-11 21:15:00] 2025-10-12 01:15:00,708 [wrapper] pandaids: 6838772289
[2025-10-11 21:15:00] 2025-10-12 01:15:00,764 [wrapper] cleanup supervisor_pilot  7598 12831
[2025-10-11 21:15:00] 2025-10-12 01:15:00,769 [wrapper] Test setup, not cleaning
[2025-10-11 21:15:00] 2025-10-12 01:15:00,774 [wrapper] apfmon messages muted
[2025-10-11 21:15:00] 2025-10-12 01:15:00,779 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:15:00] 2025-10-12 01:15:00,783 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:15:00]  *** Error codes and diagnostics ***
[2025-10-11 21:15:00]     "exeErrorCode": 0,
[2025-10-11 21:15:00]     "exeErrorDiag": "",
[2025-10-11 21:15:00]     "pilotErrorCode": 0,
[2025-10-11 21:15:00]     "pilotErrorDiag": "",
[2025-10-11 21:15:00]  *** Listing of results directory ***
[2025-10-11 21:15:00] total 403784
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 14:14 queuedata.json
[2025-10-11 21:15:00] -rwx------ 1 boincer umatlas     36292 Oct 11 14:14 runpilot2-wrapper.sh
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas       100 Oct 11 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:15:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 19:13 run_atlas
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas       105 Oct 11 19:13 job.xml
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas 218810407 Oct 11 19:13 EVNT.46676267._002503.pool.root.1
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 19:13 input.tar.gz
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:13 start_atlas.sh
[2025-10-11 21:15:00] drwxrwx--x 2 boincer umatlas      4096 Oct 11 19:13 shared
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas         0 Oct 11 19:13 boinc_lockfile
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 19:13 pandaJob.out
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas    975520 Oct 11 19:13 agis_schedconf.cvmfs.json
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas   1560580 Oct 11 19:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:15:00] drwx------ 5 boincer umatlas      4096 Oct 11 19:13 pilot3
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas      5908 Oct 11 21:10 init_data.xml
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas 187969553 Oct 11 21:13 HITS.46676269._062350.pool.root.1
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas       529 Oct 11 21:13 boinc_task_state.xml
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas      1051 Oct 11 21:14 memory_monitor_summary.json
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas    376123 Oct 11 21:14 log.46676269._062350.job.log.tgz.1
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas      7849 Oct 11 21:14 heartbeat.json
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas        95 Oct 11 21:14 pilot_heartbeat.json
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas        27 Oct 11 21:14 wrapper_checkpoint.txt
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 21:14 boinc_mmap_file
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas      4746 Oct 11 21:15 pilotlog.txt
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas   1019991 Oct 11 21:15 log.46676269._062350.job.log.1
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas       357 Oct 11 21:15 output.list
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas       620 Oct 11 21:15 runtime_log
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas   1413120 Oct 11 21:15 result.tar.gz
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas      8698 Oct 11 21:15 runtime_log.err
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas       657 Oct 11 21:15 hUVMDm7HtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeBhNDmgUBPCo.diag
[2025-10-11 21:15:00] -rw-r--r-- 1 boincer umatlas     20847 Oct 11 21:15 stderr.txt
[2025-10-11 21:15:00] HITS file was successfully produced:
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas 187969553 Oct 11 21:13 shared/HITS.pool.root.1
[2025-10-11 21:15:00]  *** Contents of shared directory: ***
[2025-10-11 21:15:00] total 399212
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas 218810407 Oct 11 19:13 ATLAS.root_0
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 19:13 input.tar.gz
[2025-10-11 21:15:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:13 start_atlas.sh
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas 187969553 Oct 11 21:13 HITS.pool.root.1
[2025-10-11 21:15:00] -rw------- 1 boincer umatlas   1413120 Oct 11 21:15 result.tar.gz
21:15:02 (9090): run_atlas exited; CPU time 52779.975697
21:15:02 (9090): called boinc_finish(0)

</stderr_txt>
]]>

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