Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:37 (1175145): wrapper (7.7.26015): starting
19:50:37 (1175145): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 19:50:37] Arguments: --nthreads 9
[2025-10-11 19:50:37] Threads: 9
[2025-10-11 19:50:37] Checking for CVMFS
[2025-10-11 19:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:50:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:50:39] 2.13.2.0 3269412 34969 390456 151600 3 630 28239998 40960001 51843 16776704 0 446304323 99.843 183276066 36802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:50:39] CVMFS is ok
[2025-10-11 19:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:50:39] Further information can be found at the LHC@home message board.
[2025-10-11 19:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:50:39] Checking for apptainer binary...
[2025-10-11 19:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:50:39] Running /usr/bin/apptainer --version
[2025-10-11 19:50:39] apptainer version 1.4.3-1.el9
[2025-10-11 19:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:50:40] c8-16-2.aglt2.org
[2025-10-11 19:50:40] apptainer works
[2025-10-11 19:50:40] Set ATHENA_PROC_NUMBER=9
[2025-10-11 19:50:40] Set ATHENA_CORE_NUMBER=9
[2025-10-11 19:50:40] Starting ATLAS job with PandaID=6838366624
[2025-10-11 19:50:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:04:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:04:09] 2025-10-12 01:03:10,038 | INFO     | time since job start (4278s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:10,759 | INFO     | monitor loop #275: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:10,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:12,045 | INFO     | time since job start (4280s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:13,278 | INFO     | monitor loop #276: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:13,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:14,064 | INFO     | time since job start (4282s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:15,782 | INFO     | monitor loop #277: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:15,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:16,071 | INFO     | time since job start (4284s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:18,078 | INFO     | time since job start (4286s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:18,293 | INFO     | monitor loop #278: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:18,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:20,086 | INFO     | time since job start (4288s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:20,806 | INFO     | monitor loop #279: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:20,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:22,093 | INFO     | time since job start (4290s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:23,311 | INFO     | monitor loop #280: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:23,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:24,128 | INFO     | time since job start (4292s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:25,827 | INFO     | monitor loop #281: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:25,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:26,863 | INFO     | PID=1190025 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:04:09] 2025-10-12 01:03:26,863 | INFO     | .. there are 80 such processes running
[2025-10-11 21:04:09] 2025-10-12 01:03:27,874 | INFO     | time since job start (4295s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:28,333 | INFO     | monitor loop #282: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:28,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:29,881 | INFO     | time since job start (4297s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:30,838 | INFO     | monitor loop #283: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:30,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:31,888 | INFO     | time since job start (4299s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:33,345 | INFO     | monitor loop #284: job 0:6838366624 is in state 'finished'
[2025-10-11 21:04:09] 2025-10-12 01:03:33,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:04:09] 2025-10-12 01:03:33,895 | INFO     | time since job start (4301s) is within the limit (172800.0s)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,290 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 21:04:09] 2025-10-12 01:03:34,309 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.990078124994
[2025-10-11 21:04:09] 2025-10-12 01:03:34,349 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838366624/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,350 | INFO     | extracted standard info from prmon json
[2025-10-11 21:04:09] 2025-10-12 01:03:34,350 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:04:09] 2025-10-12 01:03:34,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:04:09] 2025-10-12 01:03:34,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:04:09] 2025-10-12 01:03:34,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:04:09] 2025-10-12 01:03:34,351 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:04:09] 2025-10-12 01:03:34,351 | INFO     | sum of square deviations: 70366550.98360646
[2025-10-11 21:04:09] 2025-10-12 01:03:34,351 | INFO     | sum of deviations: -2132804704.6229503
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | mean x: 1760228974.0163934
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | mean y: 2220297.62295082
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | -- intersect: 53354624025.21829
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | intersect: 53354624025.21829
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | chi2: 0.026675857314170777
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | -- intersect: 53354624025.21829
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | current memory leak: -30.31 B/s (using 61 data points, chi2=0.03)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | ..............................
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . Timing measurements:
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . get job = 0 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . initial setup = 9 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . payload setup = 36 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . stage-in = 0 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . payload execution = 4167 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . stage-out = 1 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | . log creation = 0 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,352 | INFO     | ..............................
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | 
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | job summary report
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | --------------------------------------------------
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | PanDA job id: 6838366624
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | task id: 46676269
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | errors: (none)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | pilot state: finished 
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | transexitcode: 0
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | exeerrorcode: 0
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | exeerrordiag: 
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | exitcode: 0
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | exitmsg: OK
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | cpuconsumptiontime: 22632 s
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | nevents: 400
[2025-10-11 21:04:09] 2025-10-12 01:03:34,510 | INFO     | neventsw: 0
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | pid: 1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | pgrp: 1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | corecount: 9
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | event service: False
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 29: 2349203, 33: 2349231, 4208: 2375313, 4210: 2384311, 4212: 2384367, 4242: 2384561}
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | --------------------------------------------------
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | 
[2025-10-11 21:04:09] 2025-10-12 01:03:34,511 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | job 6838366624 has completed (purged errors)
[2025-10-11 21:04:09] 2025-10-12 01:03:34,571 | INFO     | overall cleanup function is called
[2025-10-11 21:04:09] 2025-10-12 01:03:35,585 | INFO     | --- collectZombieJob: --- 10, [1215339]
[2025-10-11 21:04:09] 2025-10-12 01:03:35,585 | INFO     | zombie collector waiting for pid 1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:35,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:04:09] 2025-10-12 01:03:35,585 | INFO     | collected zombie processes
[2025-10-11 21:04:09] 2025-10-12 01:03:35,585 | INFO     | will attempt to kill all subprocesses of pid=1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:37,095 | INFO     | process IDs to be killed: [1215339] (in reverse order)
[2025-10-11 21:04:09] 2025-10-12 01:03:37,408 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:04:09] 2025-10-12 01:03:37,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:04:09] 2025-10-12 01:03:37,447 | INFO     | did not find any defunct processes belonging to 1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:37,518 | INFO     | did not find any defunct processes belonging to 1215339
[2025-10-11 21:04:09] 2025-10-12 01:03:37,524 | INFO     | ready for new job
[2025-10-11 21:04:09] 2025-10-12 01:03:37,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:04:09] 2025-10-12 01:03:37,526 | INFO     | ***************************************
[2025-10-11 21:04:09] 2025-10-12 01:03:37,526 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:04:09] 2025-10-12 01:03:37,526 | INFO     | ***************************************
[2025-10-11 21:04:09] 2025-10-12 01:03:37,526 | INFO     | 
[2025-10-11 21:04:09] 2025-10-12 01:03:37,543 | INFO     | architecture information:
[2025-10-11 21:04:09] 2025-10-12 01:03:37,544 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:04:09] 2025-10-12 01:03:37,595 | INFO     | cat /etc/os-release:
[2025-10-11 21:04:09] NAME="CentOS Linux"
[2025-10-11 21:04:09] VERSION="7 (Core)"
[2025-10-11 21:04:09] ID="centos"
[2025-10-11 21:04:09] ID_LIKE="rhel fedora"
[2025-10-11 21:04:09] VERSION_ID="7"
[2025-10-11 21:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:04:09] ANSI_COLOR="0;31"
[2025-10-11 21:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:04:09] HOME_URL="https://www.centos.org/"
[2025-10-11 21:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:04:09] 
[2025-10-11 21:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:04:09] 
[2025-10-11 21:04:09] 2025-10-12 01:03:37,596 | INFO     | ***************************************
[2025-10-11 21:04:09] 2025-10-12 01:03:38,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 21:04:09] 2025-10-12 01:03:38,178 | INFO     | sufficient remaining disk space (167627456512 B)
[2025-10-11 21:04:09] 2025-10-12 01:03:38,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:04:09] 2025-10-12 01:03:38,178 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:04:09] 2025-10-12 01:03:38,179 | INFO     | update_server=False
[2025-10-11 21:04:09] 2025-10-12 01:03:38,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:04:09] 2025-10-12 01:03:38,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:04:09] 2025-10-12 01:03:38,371 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:04:09] 2025-10-12 01:03:38,371 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:04:09] 2025-10-12 01:03:38,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:04:09] 2025-10-12 01:03:38,371 | INFO     | will abort loop
[2025-10-11 21:04:09] 2025-10-12 01:03:38,444 | INFO     | all data control threads have been joined
[2025-10-11 21:04:09] 2025-10-12 01:03:38,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:04:09] 2025-10-12 01:03:39,041 | INFO     | all payload control threads have been joined
[2025-10-11 21:04:09] 2025-10-12 01:03:39,194 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,194 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,194 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,276 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,347 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,377 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,450 | INFO     | [data] control thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:04:09] 2025-10-12 01:03:39,729 | INFO     | [job] validate thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:39,851 | INFO     | all job control threads have been joined
[2025-10-11 21:04:09] 2025-10-12 01:03:40,047 | INFO     | [payload] control thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,092 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,543 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,635 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,713 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:40,857 | INFO     | [job] control thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:42,201 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:04:09] 2025-10-12 01:03:59,527 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:04:09] 2025-10-12 01:03:59,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974222767936)>', '<ExcThread(monitor, started 139973521045248)>']
[2025-10-11 21:04:09] 2025-10-12 01:04:04,742 | INFO     | all workflow threads have been joined
[2025-10-11 21:04:09] 2025-10-12 01:04:04,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:04:09] 2025-10-12 01:04:04,742 | INFO     | traces error code: 0
[2025-10-11 21:04:09] 2025-10-12 01:04:04,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:04:09] 2025-10-12 01:04:08,338 | INFO     | PID=1190025 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:04:09] 2025-10-12 01:04:08,338 | INFO     | .. there are 80 such processes running
[2025-10-11 21:04:09] 2025-10-12 01:04:08,339 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:04:09] 2025-10-12 01:04:08,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:04:09] 2025-10-12 01:04:08,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:04:09] 2025-10-12 01:04:08,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:04:09] 2025-10-12 01:04:08,339 | INFO     | [monitor] control thread has ended
[2025-10-11 21:04:09] 2025-10-12 01:04:08,539 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:04:09] 2025-10-12 01:04:08,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:04:09] 2025-10-12 01:04:08,555 [wrapper] pilotpid: 1190025
[2025-10-11 21:04:09] 2025-10-12 01:04:08,571 [wrapper] Pilot exit status: 0
[2025-10-11 21:04:09] 2025-10-12 01:04:08,653 [wrapper] pandaids: 6838366624
[2025-10-11 21:04:09] 2025-10-12 01:04:09,075 [wrapper] cleanup supervisor_pilot 1713018 1190026
[2025-10-11 21:04:09] 2025-10-12 01:04:09,098 [wrapper] Test setup, not cleaning
[2025-10-11 21:04:09] 2025-10-12 01:04:09,127 [wrapper] apfmon messages muted
[2025-10-11 21:04:09] 2025-10-12 01:04:09,170 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:04:09] 2025-10-12 01:04:09,206 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:04:09]  *** Error codes and diagnostics ***
[2025-10-11 21:04:09]     "exeErrorCode": 0,
[2025-10-11 21:04:09]     "exeErrorDiag": "",
[2025-10-11 21:04:09]     "pilotErrorCode": 0,
[2025-10-11 21:04:09]     "pilotErrorDiag": "",
[2025-10-11 21:04:09]  *** Listing of results directory ***
[2025-10-11 21:04:09] total 413188
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 08:30 queuedata.json
[2025-10-11 21:04:09] -rwx------. 1 boincer umatlas     36292 Oct 11 08:30 runpilot2-wrapper.sh
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:04:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:50 run_atlas
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:50 job.xml
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas 222412506 Oct 11 19:50 EVNT.46676267._002308.pool.root.1
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:50 start_atlas.sh
[2025-10-11 21:04:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:50 shared
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 19:50 input.tar.gz
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:50 boinc_lockfile
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:50 pandaJob.out
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas    975528 Oct 11 19:51 agis_schedconf.cvmfs.json
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:51 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:04:09] drwx------. 5 boincer umatlas      4096 Oct 11 19:51 pilot3
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas 194951330 Oct 11 21:02 HITS.46676269._057507.pool.root.1
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas       530 Oct 11 21:02 boinc_task_state.xml
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas      1034 Oct 11 21:02 memory_monitor_summary.json
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas    347405 Oct 11 21:03 log.46676269._057507.job.log.tgz.1
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas        95 Oct 11 21:03 pilot_heartbeat.json
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 21:03 init_data.xml
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas      7781 Oct 11 21:03 heartbeat.json
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:04 boinc_mmap_file
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:04 wrapper_checkpoint.txt
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas       823 Oct 11 21:04 pilotlog.txt
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas    574125 Oct 11 21:04 log.46676269._057507.job.log.1
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas       357 Oct 11 21:04 output.list
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:04 runtime_log
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas    942080 Oct 11 21:04 result.tar.gz
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 21:04 runtime_log.err
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas       651 Oct 11 21:04 lc5LDm3unR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWrRMDmXV0TTm.diag
[2025-10-11 21:04:09] -rw-r--r--. 1 boincer umatlas     22337 Oct 11 21:04 stderr.txt
[2025-10-11 21:04:09] HITS file was successfully produced:
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas 194951330 Oct 11 21:02 shared/HITS.pool.root.1
[2025-10-11 21:04:09]  *** Contents of shared directory: ***
[2025-10-11 21:04:09] total 409084
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas 222412506 Oct 11 19:50 ATLAS.root_0
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:50 start_atlas.sh
[2025-10-11 21:04:09] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 19:50 input.tar.gz
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas 194951330 Oct 11 21:02 HITS.pool.root.1
[2025-10-11 21:04:09] -rw-------. 1 boincer umatlas    942080 Oct 11 21:04 result.tar.gz
21:04:11 (1175145): run_atlas exited; CPU time 22777.256922
21:04:11 (1175145): called boinc_finish(0)

</stderr_txt>
]]>

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