Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:47 (653740): wrapper (7.7.26015): starting
19:39:47 (653740): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:39:47] Arguments: --nthreads 8
[2025-10-11 19:39:47] Threads: 8
[2025-10-11 19:39:47] Checking for CVMFS
[2025-10-11 19:39:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:39:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:39:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:39:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:39:50] 2.13.2.0 1588522 128492 689264 151600 3 674 24129507 32935936 61016 16776704 0 187400293 99.744 124308741 20516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:39:50] CVMFS is ok
[2025-10-11 19:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:39:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:39:50] Further information can be found at the LHC@home message board.
[2025-10-11 19:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:39:50] Checking for apptainer binary...
[2025-10-11 19:39:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:39:50] Running /usr/bin/apptainer --version
[2025-10-11 19:39:50] apptainer version 1.4.3-1.el9
[2025-10-11 19:39:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:39:51] c-3-40.aglt2.org
[2025-10-11 19:39:51] apptainer works
[2025-10-11 19:39:51] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:39:51] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:39:51] Starting ATLAS job with PandaID=6838773074
[2025-10-11 19:39:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:59:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:59:43] 2025-10-12 05:58:28,807 | INFO     | sum of square deviations: 15580009201.20853
[2025-10-12 01:59:43] 2025-10-12 05:58:28,847 | INFO     | sum of deviations: 67167450092.82382
[2025-10-12 01:59:43] 2025-10-12 05:58:28,848 | INFO     | mean x: 1760237396.409214
[2025-10-12 01:59:43] 2025-10-12 05:58:28,848 | INFO     | mean y: 2108499.875338753
[2025-10-12 01:59:43] 2025-10-12 05:58:28,848 | INFO     | -- intersect: -7586504314.657977
[2025-10-12 01:59:43] 2025-10-12 05:58:28,848 | INFO     | intersect: -7586504314.657977
[2025-10-12 01:59:43] 2025-10-12 05:58:28,848 | INFO     | chi2: 4.509541205910978
[2025-10-12 01:59:43] 2025-10-12 05:58:28,849 | INFO     | sum of square deviations: 14955258241.18679
[2025-10-12 01:59:43] 2025-10-12 05:58:28,930 | INFO     | sum of deviations: 106914754835.01094
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | mean x: 1760237243.912088
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | mean y: 2118123.1565934066
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | -- intersect: -12581772462.298237
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | intersect: -12581772462.298237
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | chi2: 3.07353945252873
[2025-10-12 01:59:43] 2025-10-12 05:58:28,931 | INFO     | current chi2=3.07353945252873 (change=31.843633039653298 %)
[2025-10-12 01:59:43] 2025-10-12 05:58:28,932 | INFO     | sum of square deviations: 14347437831.158764
[2025-10-12 01:59:43] 2025-10-12 05:58:28,934 | INFO     | sum of deviations: 109422692013.13643
[2025-10-12 01:59:43] 2025-10-12 05:58:28,935 | INFO     | mean x: 1760237091.4150417
[2025-10-12 01:59:43] 2025-10-12 05:58:28,935 | INFO     | mean y: 2118749.233983287
[2025-10-12 01:59:43] 2025-10-12 05:58:28,935 | INFO     | -- intersect: -13422569574.259602
[2025-10-12 01:59:43] 2025-10-12 05:58:28,935 | INFO     | intersect: -13422569574.259602
[2025-10-12 01:59:43] 2025-10-12 05:58:28,948 | INFO     | chi2: 3.06108248905565
[2025-10-12 01:59:43] 2025-10-12 05:58:28,949 | INFO     | current chi2=3.06108248905565 (change=0.40529700905029603 %)
[2025-10-12 01:59:43] 2025-10-12 05:58:28,949 | INFO     | right removable region: 358
[2025-10-12 01:59:43] 2025-10-12 05:58:28,949 | INFO     | sum of square deviations: 14955188640.359856
[2025-10-12 01:59:43] 2025-10-12 05:58:28,952 | INFO     | sum of deviations: -9776347127.793972
[2025-10-12 01:59:43] 2025-10-12 05:58:28,952 | INFO     | mean x: 1760237548.9148352
[2025-10-12 01:59:43] 2025-10-12 05:58:28,952 | INFO     | mean y: 2127230.6840659343
[2025-10-12 01:59:43] 2025-10-12 05:58:28,952 | INFO     | -- intersect: 1152811031.4304647
[2025-10-12 01:59:43] 2025-10-12 05:58:28,952 | INFO     | intersect: 1152811031.4304647
[2025-10-12 01:59:43] 2025-10-12 05:58:28,953 | INFO     | chi2: 2.0963526136355917
[2025-10-12 01:59:43] 2025-10-12 05:58:28,953 | INFO     | current chi2=2.0963526136355917 (change=53.512951364370444 %)
[2025-10-12 01:59:43] 2025-10-12 05:58:28,953 | INFO     | sum of square deviations: 14347320833.325945
[2025-10-12 01:59:43] 2025-10-12 05:58:28,996 | INFO     | sum of deviations: -41581197482.25906
[2025-10-12 01:59:43] 2025-10-12 05:58:28,996 | INFO     | mean x: 1760237701.4178274
[2025-10-12 01:59:43] 2025-10-12 05:58:28,996 | INFO     | mean y: 2135193.8217270193
[2025-10-12 01:59:43] 2025-10-12 05:58:28,996 | INFO     | -- intersect: 5103630610.886653
[2025-10-12 01:59:43] 2025-10-12 05:58:28,996 | INFO     | intersect: 5103630610.886653
[2025-10-12 01:59:43] 2025-10-12 05:58:29,004 | INFO     | chi2: 1.6950350307769741
[2025-10-12 01:59:43] 2025-10-12 05:58:29,004 | INFO     | current chi2=1.6950350307769741 (change=19.143610681155113 %)
[2025-10-12 01:59:43] 2025-10-12 05:58:29,004 | INFO     | left removable region: 20
[2025-10-12 01:59:43] 2025-10-12 05:58:29,005 | INFO     | sum of square deviations: 11974081760.000038
[2025-10-12 01:59:43] 2025-10-12 05:58:29,007 | INFO     | sum of deviations: -3240121172.384616
[2025-10-12 01:59:43] 2025-10-12 05:58:29,007 | INFO     | mean x: 1760237670.9230769
[2025-10-12 01:59:43] 2025-10-12 05:58:29,007 | INFO     | mean y: 2148043.523668639
[2025-10-12 01:59:43] 2025-10-12 05:58:29,007 | INFO     | -- intersect: 478458750.29028314
[2025-10-12 01:59:43] 2025-10-12 05:58:29,007 | INFO     | intersect: 478458750.29028314
[2025-10-12 01:59:43] 2025-10-12 05:58:29,008 | INFO     | chi2: 0.1658498586867225
[2025-10-12 01:59:43] 2025-10-12 05:58:29,016 | INFO     | -- intersect: 478458750.29028314
[2025-10-12 01:59:43] 2025-10-12 05:58:29,016 | INFO     | current memory leak: -0.27 B/s (using 338 data points, chi2=0.17)
[2025-10-12 01:59:43] 2025-10-12 05:58:29,017 | INFO     | could have reported an average CPU frequency of 2975 MHz (16 samples)
[2025-10-12 01:59:43] 2025-10-12 05:58:29,031 | INFO     | ..............................
[2025-10-12 01:59:43] 2025-10-12 05:58:29,031 | INFO     | . Timing measurements:
[2025-10-12 01:59:43] 2025-10-12 05:58:29,031 | INFO     | . get job = 0 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,031 | INFO     | . initial setup = 4 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | . payload setup = 34 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | . stage-in = 0 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | . payload execution = 22485 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | . stage-out = 9 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | . log creation = 2 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,032 | INFO     | ..............................
[2025-10-12 01:59:43] 2025-10-12 05:58:29,907 | INFO     | 
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | job summary report
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | --------------------------------------------------
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | PanDA job id: 6838773074
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | task id: 46676269
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | errors: (none)
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | pilot state: finished 
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | transexitcode: 0
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | exeerrorcode: 0
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | exeerrordiag: 
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | exitcode: 0
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | exitmsg: OK
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | cpuconsumptiontime: 45091 s
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | nevents: 400
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | neventsw: 0
[2025-10-12 01:59:43] 2025-10-12 05:58:29,908 | INFO     | pid: 680964
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | pgrp: 680964
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | corecount: 8
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | event service: False
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 32: 2349259, 35: 2349415, 22525: 2383191, 22526: 2383190, 22536: 2392244, 22540: 2392300, 225
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | --------------------------------------------------
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | 
[2025-10-12 01:59:43] 2025-10-12 05:58:29,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | job 6838773074 has completed (purged errors)
[2025-10-12 01:59:43] 2025-10-12 05:58:30,158 | INFO     | overall cleanup function is called
[2025-10-12 01:59:43] 2025-10-12 05:58:31,217 | INFO     | --- collectZombieJob: --- 10, [680964]
[2025-10-12 01:59:43] 2025-10-12 05:58:31,217 | INFO     | zombie collector waiting for pid 680964
[2025-10-12 01:59:43] 2025-10-12 05:58:31,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:59:43] 2025-10-12 05:58:31,218 | INFO     | collected zombie processes
[2025-10-12 01:59:43] 2025-10-12 05:58:31,218 | INFO     | will attempt to kill all subprocesses of pid=680964
[2025-10-12 01:59:43] 2025-10-12 05:58:36,159 | INFO     | PID=664284 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 01:59:43] 2025-10-12 05:58:36,159 | INFO     | .. there are 82 such processes running
[2025-10-12 01:59:43] 2025-10-12 05:58:37,316 | INFO     | process IDs to be killed: [680964] (in reverse order)
[2025-10-12 01:59:43] 2025-10-12 05:58:38,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:59:43] 2025-10-12 05:58:38,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:59:43] 2025-10-12 05:58:39,014 | INFO     | did not find any defunct processes belonging to 680964
[2025-10-12 01:59:43] 2025-10-12 05:58:39,109 | INFO     | did not find any defunct processes belonging to 680964
[2025-10-12 01:59:43] 2025-10-12 05:58:39,109 | INFO     | ready for new job
[2025-10-12 01:59:43] 2025-10-12 05:58:39,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:59:43] 2025-10-12 05:58:39,120 | INFO     | ***************************************
[2025-10-12 01:59:43] 2025-10-12 05:58:39,121 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:59:43] 2025-10-12 05:58:39,121 | INFO     | ***************************************
[2025-10-12 01:59:43] 2025-10-12 05:58:39,121 | INFO     | 
[2025-10-12 01:59:43] 2025-10-12 05:58:39,161 | INFO     | architecture information:
[2025-10-12 01:59:43] 2025-10-12 05:58:39,172 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:59:43] 2025-10-12 05:58:39,288 | INFO     | cat /etc/os-release:
[2025-10-12 01:59:43] NAME="CentOS Linux"
[2025-10-12 01:59:43] VERSION="7 (Core)"
[2025-10-12 01:59:43] ID="centos"
[2025-10-12 01:59:43] ID_LIKE="rhel fedora"
[2025-10-12 01:59:43] VERSION_ID="7"
[2025-10-12 01:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:59:43] ANSI_COLOR="0;31"
[2025-10-12 01:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:59:43] HOME_URL="https://www.centos.org/"
[2025-10-12 01:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:59:43] 
[2025-10-12 01:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:59:43] 
[2025-10-12 01:59:43] 2025-10-12 05:58:39,289 | INFO     | ***************************************
[2025-10-12 01:59:43] 2025-10-12 05:58:39,792 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | INFO     | sufficient remaining disk space (72581382144 B)
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | INFO     | update_server=False
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:59:43] 2025-10-12 05:58:39,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:59:43] 2025-10-12 05:58:39,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:59:43] 2025-10-12 05:58:39,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:59:43] 2025-10-12 05:58:39,992 | INFO     | all payload control threads have been joined
[2025-10-12 01:59:43] 2025-10-12 05:58:40,069 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 01:59:43] 2025-10-12 05:58:40,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 01:59:43] 2025-10-12 05:58:40,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:59:43] 2025-10-12 05:58:40,070 | INFO     | will abort loop
[2025-10-12 01:59:43] 2025-10-12 05:58:40,136 | INFO     | all data control threads have been joined
[2025-10-12 01:59:43] 2025-10-12 05:58:40,920 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:40,921 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:40,998 | INFO     | [payload] control thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,075 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,088 | INFO     | all job control threads have been joined
[2025-10-12 01:59:43] 2025-10-12 05:58:41,141 | INFO     | [data] control thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,731 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,833 | INFO     | [job] validate thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,921 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:41,994 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:42,093 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:42,094 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:42,094 | INFO     | [job] control thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:42,145 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:42,309 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:58:43,926 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:59:43] 2025-10-12 05:59:13,166 | INFO     | PID=664284 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 01:59:43] 2025-10-12 05:59:13,185 | INFO     | .. there are 82 such processes running
[2025-10-12 01:59:43] 2025-10-12 05:59:13,185 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:59:43] 2025-10-12 05:59:13,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:59:43] 2025-10-12 05:59:13,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:59:43] 2025-10-12 05:59:32,279 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:59:43] 2025-10-12 05:59:33,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781124556608)>', '<ExcThread(monitor, started 139780624992000)>']
[2025-10-12 01:59:43] 2025-10-12 05:59:34,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:59:43] 2025-10-12 05:59:34,361 | INFO     | [monitor] control thread has ended
[2025-10-12 01:59:43] 2025-10-12 05:59:38,960 | INFO     | all workflow threads have been joined
[2025-10-12 01:59:43] 2025-10-12 05:59:38,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:59:43] 2025-10-12 05:59:38,975 | INFO     | traces error code: 0
[2025-10-12 01:59:43] 2025-10-12 05:59:38,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:59:43] 2025-10-12 05:59:40,696 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:59:43] 2025-10-12 05:59:40,738 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:59:43] 2025-10-12 05:59:40,753 [wrapper] pilotpid: 664284
[2025-10-12 01:59:43] 2025-10-12 05:59:40,766 [wrapper] Pilot exit status: 0
[2025-10-12 01:59:43] 2025-10-12 05:59:40,879 [wrapper] pandaids: 6838773074
[2025-10-12 01:59:43] 2025-10-12 05:59:41,980 [wrapper] cleanup supervisor_pilot 2530156 664285
[2025-10-12 01:59:43] 2025-10-12 05:59:42,008 [wrapper] Test setup, not cleaning
[2025-10-12 01:59:43] 2025-10-12 05:59:42,033 [wrapper] apfmon messages muted
[2025-10-12 01:59:43] 2025-10-12 05:59:42,050 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:59:43] 2025-10-12 05:59:42,097 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:59:43]  *** Error codes and diagnostics ***
[2025-10-12 01:59:43]     "exeErrorCode": 0,
[2025-10-12 01:59:43]     "exeErrorDiag": "",
[2025-10-12 01:59:43]     "pilotErrorCode": 0,
[2025-10-12 01:59:43]     "pilotErrorDiag": "",
[2025-10-12 01:59:43]  *** Listing of results directory ***
[2025-10-12 01:59:43] total 418892
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:19 queuedata.json
[2025-10-12 01:59:43] -rwx------. 1 boincer umatlas     36292 Oct 11 14:20 runpilot2-wrapper.sh
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:59:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:39 run_atlas
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:39 job.xml
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas 222040219 Oct 11 19:39 EVNT.46676267._002511.pool.root.1
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:39 start_atlas.sh
[2025-10-12 01:59:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:39 shared
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 19:39 input.tar.gz
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:39 boinc_lockfile
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:39 pandaJob.out
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas    975528 Oct 11 19:40 agis_schedconf.cvmfs.json
[2025-10-12 01:59:43] drwx------. 5 boincer umatlas      4096 Oct 11 19:40 pilot3
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas 197019496 Oct 12 01:55 HITS.46676269._062504.pool.root.1
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas       531 Oct 12 01:55 boinc_task_state.xml
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas      1043 Oct 12 01:57 memory_monitor_summary.json
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas    526077 Oct 12 01:57 log.46676269._062504.job.log.tgz.1
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 01:57 init_data.xml
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas      7819 Oct 12 01:58 heartbeat.json
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas        95 Oct 12 01:58 pilot_heartbeat.json
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas      5009 Oct 12 01:59 pilotlog.txt
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:59 boinc_mmap_file
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas        28 Oct 12 01:59 wrapper_checkpoint.txt
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas   2462333 Oct 12 01:59 log.46676269._062504.job.log.1
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas       357 Oct 12 01:59 output.list
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:59 runtime_log
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas   3010560 Oct 12 01:59 result.tar.gz
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 01:59 runtime_log.err
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas       654 Oct 12 01:59 mksMDmBOtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzChNDm5DwvDm.diag
[2025-10-12 01:59:43] -rw-r--r--. 1 boincer umatlas     21184 Oct 12 01:59 stderr.txt
[2025-10-12 01:59:43] HITS file was successfully produced:
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas 197019496 Oct 12 01:55 shared/HITS.pool.root.1
[2025-10-12 01:59:43]  *** Contents of shared directory: ***
[2025-10-12 01:59:43] total 412764
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas 222040219 Oct 11 19:39 ATLAS.root_0
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:39 start_atlas.sh
[2025-10-12 01:59:43] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 19:39 input.tar.gz
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas 197019496 Oct 12 01:55 HITS.pool.root.1
[2025-10-12 01:59:43] -rw-------. 1 boincer umatlas   3010560 Oct 12 01:59 result.tar.gz
01:59:45 (653740): run_atlas exited; CPU time 46296.130946
01:59:45 (653740): called boinc_finish(0)

</stderr_txt>
]]>

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