Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:40:30 (331274): wrapper (7.7.26015): starting
07:40:30 (331274): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:40:30] Arguments: --nthreads 4
[2025-10-13 07:40:30] Threads: 4
[2025-10-13 07:40:30] Checking for CVMFS
[2025-10-13 07:40:30] No cvmfs_config command found, will try listing directly
[2025-10-13 07:40:30] CVMFS is ok
[2025-10-13 07:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:40:30] Further information can be found at the LHC@home message board.
[2025-10-13 07:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:40:30] Checking for apptainer binary...
[2025-10-13 07:40:30] which: no apptainer in ((null))
[2025-10-13 07:40:30] apptainer is not installed, using version from CVMFS
[2025-10-13 07:40:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:40:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-13 07:40:30] apptainer works
[2025-10-13 07:40:30] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:40:30] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:40:30] Starting ATLAS job with PandaID=6838772124
[2025-10-13 07:40:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:35:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:35:24] 2025-10-13 08:30:28,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:35:24] 2025-10-13 08:30:28,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:35:24] 2025-10-13 08:30:28,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:35:24] 2025-10-13 08:30:28,187 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:35:24] 2025-10-13 08:30:28,187 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,188 | INFO     | sum of deviations: -18229947661.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,188 | INFO     | mean x: 1760339129.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,188 | INFO     | mean y: 2359731.233532934
[2025-10-13 10:35:24] 2025-10-13 08:30:28,189 | INFO     | -- intersect: 22223661618.49744
[2025-10-13 10:35:24] 2025-10-13 08:30:28,189 | INFO     | intersect: 22223661618.49744
[2025-10-13 10:35:24] 2025-10-13 08:30:28,189 | INFO     | chi2: 2.105617577037904
[2025-10-13 10:35:24] 2025-10-13 08:30:28,189 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 10:35:24] 2025-10-13 08:30:28,190 | INFO     | sum of deviations: -7783476658.000006
[2025-10-13 10:35:24] 2025-10-13 08:30:28,190 | INFO     | mean x: 1760338976.5
[2025-10-13 10:35:24] 2025-10-13 08:30:28,190 | INFO     | mean y: 2372106.7901234566
[2025-10-13 10:35:24] 2025-10-13 08:30:28,191 | INFO     | -- intersect: 10395900657.578371
[2025-10-13 10:35:24] 2025-10-13 08:30:28,191 | INFO     | intersect: 10395900657.578371
[2025-10-13 10:35:24] 2025-10-13 08:30:28,191 | INFO     | chi2: 1.4468954757504264
[2025-10-13 10:35:24] 2025-10-13 08:30:28,191 | INFO     | current chi2=1.4468954757504264 (change=31.284033172545072 %)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,191 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,192 | INFO     | sum of deviations: -7083143344.000002
[2025-10-13 10:35:24] 2025-10-13 08:30:28,192 | INFO     | mean x: 1760338824.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,192 | INFO     | mean y: 2373009.585987261
[2025-10-13 10:35:24] 2025-10-13 08:30:28,192 | INFO     | -- intersect: 10393497228.182867
[2025-10-13 10:35:24] 2025-10-13 08:30:28,192 | INFO     | intersect: 10393497228.182867
[2025-10-13 10:35:24] 2025-10-13 08:30:28,193 | INFO     | chi2: 1.4468997813944524
[2025-10-13 10:35:24] 2025-10-13 08:30:28,193 | INFO     | current chi2=1.4468997813944524 (change=-0.0002975780972532471 %)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,193 | INFO     | right removable region: 156
[2025-10-13 10:35:24] 2025-10-13 08:30:28,193 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 10:35:24] 2025-10-13 08:30:28,194 | INFO     | sum of deviations: -39370298225.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,194 | INFO     | mean x: 1760339281.5
[2025-10-13 10:35:24] 2025-10-13 08:30:28,194 | INFO     | mean y: 2384941.3950617285
[2025-10-13 10:35:24] 2025-10-13 08:30:28,194 | INFO     | -- intersect: 52574828790.405975
[2025-10-13 10:35:24] 2025-10-13 08:30:28,195 | INFO     | intersect: 52574828790.405975
[2025-10-13 10:35:24] 2025-10-13 08:30:28,195 | INFO     | chi2: 0.7739101520796511
[2025-10-13 10:35:24] 2025-10-13 08:30:28,195 | INFO     | current chi2=0.7739101520796511 (change=63.24545537046875 %)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,195 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,196 | INFO     | sum of deviations: -36844375943.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,196 | INFO     | mean x: 1760339434.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,196 | INFO     | mean y: 2381679.0127388537
[2025-10-13 10:35:24] 2025-10-13 08:30:28,196 | INFO     | -- intersect: 54053895428.63194
[2025-10-13 10:35:24] 2025-10-13 08:30:28,197 | INFO     | intersect: 54053895428.63194
[2025-10-13 10:35:24] 2025-10-13 08:30:28,197 | INFO     | chi2: 0.7738661993442277
[2025-10-13 10:35:24] 2025-10-13 08:30:28,198 | INFO     | current chi2=0.7738661993442277 (change=0.005679307256176615 %)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,198 | INFO     | left removable region: 20
[2025-10-13 10:35:24] 2025-10-13 08:30:28,198 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,199 | INFO     | sum of deviations: -19721572578.500004
[2025-10-13 10:35:24] 2025-10-13 08:30:28,199 | INFO     | mean x: 1760339403.5
[2025-10-13 10:35:24] 2025-10-13 08:30:28,199 | INFO     | mean y: 2388940.992647059
[2025-10-13 10:35:24] 2025-10-13 08:30:28,199 | INFO     | -- intersect: 44513279598.0501
[2025-10-13 10:35:24] 2025-10-13 08:30:28,199 | INFO     | intersect: 44513279598.0501
[2025-10-13 10:35:24] 2025-10-13 08:30:28,200 | INFO     | chi2: 0.08753696119027425
[2025-10-13 10:35:24] 2025-10-13 08:30:28,200 | INFO     | -- intersect: 44513279598.0501
[2025-10-13 10:35:24] 2025-10-13 08:30:28,200 | INFO     | current memory leak: -25.29 B/s (using 136 data points, chi2=0.09)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,200 | INFO     | could have reported an average CPU frequency of 2727 MHz (9 samples)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,200 | INFO     | ..............................
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . Timing measurements:
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . get job = 0 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . initial setup = 1 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . payload setup = 5 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . stage-in = 0 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . payload execution = 10153 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . stage-out = 0 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | . log creation = 0 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,201 | INFO     | ..............................
[2025-10-13 10:35:24] 2025-10-13 08:30:28,300 | INFO     | 
[2025-10-13 10:35:24] 2025-10-13 08:30:28,300 | INFO     | job summary report
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | --------------------------------------------------
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | PanDA job id: 6838772124
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | task id: 46676269
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | errors: (none)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | pilot state: finished 
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | transexitcode: 0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | exeerrorcode: 0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | exeerrordiag: 
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | exitcode: 0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,301 | INFO     | exitmsg: OK
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | cpuconsumptiontime: 39211 s
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | nevents: 400
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | neventsw: 0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | pid: 353897
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | pgrp: 353897
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | corecount: 4
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | event service: False
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | sizes: {0: 2347974, 1: 2348841, 5: 2349103, 12: 2349159, 10162: 2377879, 10163: 2377878, 10165: 2387082, 10168: 2387138, 10172: 2387396}
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | --------------------------------------------------
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | 
[2025-10-13 10:35:24] 2025-10-13 08:30:28,302 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-13 10:35:24] 2025-10-13 08:30:28,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:35:24] 2025-10-13 08:30:28,327 | INFO     | job 6838772124 has completed (purged errors)
[2025-10-13 10:35:24] 2025-10-13 08:30:28,327 | INFO     | overall cleanup function is called
[2025-10-13 10:35:24] 2025-10-13 08:30:29,334 | INFO     | --- collectZombieJob: --- 10, [353897]
[2025-10-13 10:35:24] 2025-10-13 08:30:29,335 | INFO     | zombie collector waiting for pid 353897
[2025-10-13 10:35:24] 2025-10-13 08:30:29,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:35:24] 2025-10-13 08:30:29,335 | INFO     | collected zombie processes
[2025-10-13 10:35:24] 2025-10-13 08:30:29,335 | INFO     | will attempt to kill all subprocesses of pid=353897
[2025-10-13 10:35:24] 2025-10-13 08:30:29,701 | INFO     | process IDs to be killed: [353897] (in reverse order)
[2025-10-13 10:35:24] 2025-10-13 08:30:29,810 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:35:24] 2025-10-13 08:30:29,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:35:24] 2025-10-13 08:30:29,823 | INFO     | did not find any defunct processes belonging to 353897
[2025-10-13 10:35:24] 2025-10-13 08:30:29,834 | INFO     | did not find any defunct processes belonging to 353897
[2025-10-13 10:35:24] 2025-10-13 08:30:29,835 | INFO     | ready for new job
[2025-10-13 10:35:24] 2025-10-13 08:30:29,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:35:24] 2025-10-13 08:30:29,838 | INFO     | ***************************************
[2025-10-13 10:35:24] 2025-10-13 08:30:29,838 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:35:24] 2025-10-13 08:30:29,838 | INFO     | ***************************************
[2025-10-13 10:35:24] 2025-10-13 08:30:29,838 | INFO     | 
[2025-10-13 10:35:24] 2025-10-13 08:30:29,842 | INFO     | architecture information:
[2025-10-13 10:35:24] 2025-10-13 08:30:29,842 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:35:24] 2025-10-13 08:30:29,858 | INFO     | cat /etc/os-release:
[2025-10-13 10:35:24] NAME="CentOS Linux"
[2025-10-13 10:35:24] VERSION="7 (Core)"
[2025-10-13 10:35:24] ID="centos"
[2025-10-13 10:35:24] ID_LIKE="rhel fedora"
[2025-10-13 10:35:24] VERSION_ID="7"
[2025-10-13 10:35:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:35:24] ANSI_COLOR="0;31"
[2025-10-13 10:35:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:35:24] HOME_URL="https://www.centos.org/"
[2025-10-13 10:35:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:35:24] 
[2025-10-13 10:35:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:35:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:35:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:35:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:35:24] 
[2025-10-13 10:35:24] 2025-10-13 08:30:29,859 | INFO     | ***************************************
[2025-10-13 10:35:24] 2025-10-13 08:30:30,362 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-13 10:35:24] 2025-10-13 08:30:30,380 | INFO     | sufficient remaining disk space (693536555008 B)
[2025-10-13 10:35:24] 2025-10-13 08:30:30,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:35:24] 2025-10-13 08:30:30,381 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:35:24] 2025-10-13 08:30:30,381 | INFO     | update_server=False
[2025-10-13 10:35:24] 2025-10-13 08:30:30,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:35:24] 2025-10-13 08:30:30,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:35:24] 2025-10-13 08:30:30,541 | INFO     | all job control threads have been joined
[2025-10-13 10:35:24] 2025-10-13 08:30:30,550 | INFO     | all data control threads have been joined
[2025-10-13 10:35:24] 2025-10-13 08:30:31,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:35:24] 2025-10-13 08:30:31,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:35:24] 2025-10-13 08:30:31,238 | INFO     | aborting loop
[2025-10-13 10:35:24] 2025-10-13 08:30:31,358 | INFO     | all payload control threads have been joined
[2025-10-13 10:35:24] 2025-10-13 08:30:31,387 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,398 | INFO     | [job] validate thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,546 | INFO     | [job] control thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,551 | INFO     | [data] control thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,648 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,765 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:31,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:32,038 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:32,243 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:32,363 | INFO     | [payload] control thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:32,457 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:32,613 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:33,233 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:33,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:35:24] 2025-10-13 08:30:34,313 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:34,388 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:35:24] 2025-10-13 08:30:55,649 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:35:24] 2025-10-13 08:30:55,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23179630466880)>', '<ExcThread(monitor, started 23179319805696)>']
[2025-10-13 10:35:24] 2025-10-13 08:31:00,005 | INFO     | PID=337778 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 10:35:24] 2025-10-13 08:31:00,006 | INFO     | .. there are 5 such processes running
[2025-10-13 10:35:24] 2025-10-13 08:31:00,006 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:35:24] 2025-10-13 08:31:00,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:35:24] 2025-10-13 08:31:00,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:35:24] 2025-10-13 08:31:00,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:35:24] 2025-10-13 08:31:00,007 | INFO     | [monitor] control thread has ended
[2025-10-13 10:35:24] 2025-10-13 08:31:00,897 | INFO     | all workflow threads have been joined
[2025-10-13 10:35:24] 2025-10-13 08:31:00,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:35:24] 2025-10-13 08:31:00,898 | INFO     | traces error code: 0
[2025-10-13 10:35:24] 2025-10-13 08:31:00,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:35:24] 2025-10-13 08:31:01,055 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:35:24] 2025-10-13 08:31:01,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:35:24] 2025-10-13 08:31:01,060 [wrapper] pilotpid: 337778
[2025-10-13 10:35:24] 2025-10-13 08:31:01,062 [wrapper] Pilot exit status: 0
[2025-10-13 10:35:24] 2025-10-13 08:31:01,072 [wrapper] pandaids: 6838772124
[2025-10-13 10:35:24] 2025-10-13 08:31:01,142 [wrapper] cleanup supervisor_pilot  591966 337779
[2025-10-13 10:35:24] 2025-10-13 08:31:01,146 [wrapper] Test setup, not cleaning
[2025-10-13 10:35:24] 2025-10-13 08:31:01,149 [wrapper] apfmon messages muted
[2025-10-13 10:35:24] 2025-10-13 08:31:01,151 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:35:24] 2025-10-13 08:31:01,154 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:35:24]  *** Error codes and diagnostics ***
[2025-10-13 10:35:24]     "exeErrorCode": 0,
[2025-10-13 10:35:24]     "exeErrorDiag": "",
[2025-10-13 10:35:24]     "pilotErrorCode": 0,
[2025-10-13 10:35:24]     "pilotErrorDiag": "",
[2025-10-13 10:35:24]  *** Listing of results directory ***
[2025-10-13 10:35:24] total 410044
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:33 pilot3.tar.gz
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:43 queuedata.json
[2025-10-13 10:35:24] -rwx------ 1 boinc boinc     36292 Oct 11 19:44 runpilot2-wrapper.sh
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:35:24] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:40 run_atlas
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:40 job.xml
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc      6635 Oct 13 07:40 init_data.xml
[2025-10-13 10:35:24] -rw-r--r-- 2 boinc boinc 219814995 Oct 13 07:40 EVNT.46676267._000912.pool.root.1
[2025-10-13 10:35:24] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:40 start_atlas.sh
[2025-10-13 10:35:24] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:40 shared
[2025-10-13 10:35:24] -rw-r--r-- 2 boinc boinc    569687 Oct 13 07:40 input.tar.gz
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:40 boinc_lockfile
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc      2547 Oct 13 07:40 pandaJob.out
[2025-10-13 10:35:24] -rw------- 1 boinc boinc    973230 Oct 13 07:40 agis_schedconf.cvmfs.json
[2025-10-13 10:35:24] -rw------- 1 boinc boinc   1560580 Oct 13 07:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:35:24] drwx------ 5 boinc boinc      4096 Oct 13 07:40 pilot3
[2025-10-13 10:35:24] -rw------- 1 boinc boinc 192601107 Oct 13 10:29 HITS.46676269._062185.pool.root.1
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:30 boinc_task_state.xml
[2025-10-13 10:35:24] -rw------- 1 boinc boinc      1033 Oct 13 10:30 memory_monitor_summary.json
[2025-10-13 10:35:24] -rw------- 1 boinc boinc    335122 Oct 13 10:30 log.46676269._062185.job.log.tgz.1
[2025-10-13 10:35:24] -rw------- 1 boinc boinc      7832 Oct 13 10:30 heartbeat.json
[2025-10-13 10:35:24] -rw------- 1 boinc boinc        95 Oct 13 10:31 pilot_heartbeat.json
[2025-10-13 10:35:24] -rw------- 1 boinc boinc      4832 Oct 13 10:31 pilotlog.txt
[2025-10-13 10:35:24] -rw------- 1 boinc boinc   1453050 Oct 13 10:31 log.46676269._062185.job.log.1
[2025-10-13 10:35:24] -rw------- 1 boinc boinc       357 Oct 13 10:31 output.list
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:31 runtime_log
[2025-10-13 10:35:24] -rw------- 1 boinc boinc   1802240 Oct 13 10:31 result.tar.gz
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc      9070 Oct 13 10:31 runtime_log.err
[2025-10-13 10:35:24] -rw------- 1 boinc boinc       664 Oct 13 10:31 IXiMDmxosR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX9gNDmJplHOo.diag
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc        26 Oct 13 10:35 wrapper_checkpoint.txt
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:35 boinc_mmap_file
[2025-10-13 10:35:24] -rw-r--r-- 1 boinc boinc     20680 Oct 13 10:35 stderr.txt
[2025-10-13 10:35:24] HITS file was successfully produced:
[2025-10-13 10:35:25] -rw------- 1 boinc boinc 192601107 Oct 13 10:29 shared/HITS.pool.root.1
[2025-10-13 10:35:25]  *** Contents of shared directory: ***
[2025-10-13 10:35:25] total 405096
[2025-10-13 10:35:25] -rw-r--r-- 2 boinc boinc 219814995 Oct 13 07:40 ATLAS.root_0
[2025-10-13 10:35:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:40 start_atlas.sh
[2025-10-13 10:35:25] -rw-r--r-- 2 boinc boinc    569687 Oct 13 07:40 input.tar.gz
[2025-10-13 10:35:25] -rw------- 1 boinc boinc 192601107 Oct 13 10:29 HITS.pool.root.1
[2025-10-13 10:35:25] -rw------- 1 boinc boinc   1802240 Oct 13 10:31 result.tar.gz
10:35:27 (331274): run_atlas exited; CPU time 39570.890766
10:35:27 (331274): called boinc_finish(0)

</stderr_txt>
]]>

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