Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:17 (106307): wrapper (7.7.26015): starting
15:54:17 (106307): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 15:54:17] Arguments: --nthreads 4
[2025-10-13 15:54:17] Threads: 4
[2025-10-13 15:54:17] Checking for CVMFS
[2025-10-13 15:54:17] No cvmfs_config command found, will try listing directly
[2025-10-13 15:54:17] CVMFS is ok
[2025-10-13 15:54:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 15:54:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 15:54:17] Further information can be found at the LHC@home message board.
[2025-10-13 15:54:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:54:17] Checking for apptainer binary...
[2025-10-13 15:54:17] which: no apptainer in ((null))
[2025-10-13 15:54:17] apptainer is not installed, using version from CVMFS
[2025-10-13 15:54:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:54:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-13 15:54:17] apptainer works
[2025-10-13 15:54:17] Set ATHENA_PROC_NUMBER=4
[2025-10-13 15:54:17] Set ATHENA_CORE_NUMBER=4
[2025-10-13 15:54:18] Starting ATLAS job with PandaID=6838913510
[2025-10-13 15:54:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:51:13 (553880): wrapper (7.7.26015): starting
18:51:13 (553880): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 18:51:13] Arguments: --nthreads 4
[2025-10-13 18:51:13] Threads: 4
[2025-10-13 18:51:13] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:51:13] Checking for CVMFS
[2025-10-13 18:51:13] No cvmfs_config command found, will try listing directly
[2025-10-13 18:51:14] CVMFS is ok
[2025-10-13 18:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:51:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:51:14] Further information can be found at the LHC@home message board.
[2025-10-13 18:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:51:14] Checking for apptainer binary...
[2025-10-13 18:51:14] which: no apptainer in ((null))
[2025-10-13 18:51:14] apptainer is not installed, using version from CVMFS
[2025-10-13 18:51:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:51:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-13 18:51:14] apptainer works
[2025-10-13 18:51:14] Set ATHENA_PROC_NUMBER=4
[2025-10-13 18:51:14] Set ATHENA_CORE_NUMBER=4
[2025-10-13 18:51:14] Starting ATLAS job with PandaID=6838913510
[2025-10-13 18:51:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:17:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:17:00] 2025-10-13 19:16:25,562 | INFO     | time since job start (8697s) is within the limit (172800.0s)
[2025-10-13 21:17:00] 2025-10-13 19:16:26,612 | INFO     | monitor loop #586: job 0:6838913510 is in state 'finished'
[2025-10-13 21:17:00] 2025-10-13 19:16:26,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,235 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:17:00] 2025-10-13 19:16:27,254 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2726.3559687499996
[2025-10-13 21:17:00] 2025-10-13 19:16:27,280 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6838913510/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,281 | INFO     | extracted standard info from prmon json
[2025-10-13 21:17:00] 2025-10-13 19:16:27,281 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:17:00] 2025-10-13 19:16:27,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:17:00] 2025-10-13 19:16:27,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:17:00] 2025-10-13 19:16:27,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:17:00] 2025-10-13 19:16:27,284 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:17:00] 2025-10-13 19:16:27,285 | INFO     | sum of square deviations: 887816723.4929576
[2025-10-13 21:17:00] 2025-10-13 19:16:27,285 | INFO     | sum of deviations: -13201334815.140842
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | mean x: 1760378617.5070422
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | mean y: 2366768.1408450706
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | -- intersect: 26178205672.9253
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | intersect: 26178205672.9253
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | chi2: 1.3664137305696409
[2025-10-13 21:17:00] 2025-10-13 19:16:27,286 | INFO     | sum of square deviations: 797294400.9927018
[2025-10-13 21:17:00] 2025-10-13 19:16:27,287 | INFO     | sum of deviations: -12607445185.437956
[2025-10-13 21:17:00] 2025-10-13 19:16:27,287 | INFO     | mean x: 1760378465.0072992
[2025-10-13 21:17:00] 2025-10-13 19:16:27,287 | INFO     | mean y: 2367770.437956204
[2025-10-13 21:17:00] 2025-10-13 19:16:27,287 | INFO     | -- intersect: 27838854487.981194
[2025-10-13 21:17:00] 2025-10-13 19:16:27,287 | INFO     | intersect: 27838854487.981194
[2025-10-13 21:17:00] 2025-10-13 19:16:27,288 | INFO     | chi2: 1.3624477270143207
[2025-10-13 21:17:00] 2025-10-13 19:16:27,288 | INFO     | current chi2=1.3624477270143207 (change=0.2902491000047838 %)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,288 | INFO     | right removable region: 136
[2025-10-13 21:17:00] 2025-10-13 19:16:27,288 | INFO     | sum of square deviations: 797293790.9927018
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | sum of deviations: -21322364133.613144
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | mean x: 1760378770.0072992
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | mean y: 2379832.613138686
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | -- intersect: 47080931768.20854
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | intersect: 47080931768.20854
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | chi2: 0.28836759126490313
[2025-10-13 21:17:00] 2025-10-13 19:16:27,289 | INFO     | current chi2=0.28836759126490313 (change=78.89602652450762 %)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,290 | INFO     | sum of square deviations: 713143070.9924244
[2025-10-13 21:17:00] 2025-10-13 19:16:27,290 | INFO     | sum of deviations: -13258830940.106073
[2025-10-13 21:17:00] 2025-10-13 19:16:27,290 | INFO     | mean x: 1760378922.5075758
[2025-10-13 21:17:00] 2025-10-13 19:16:27,290 | INFO     | mean y: 2365208.106060606
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | -- intersect: 32731515182.981133
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | intersect: 32731515182.981133
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | chi2: 0.21949618446315916
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | current chi2=0.21949618446315916 (change=23.88319939132017 %)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | left removable region: 20
[2025-10-13 21:17:00] 2025-10-13 19:16:27,291 | INFO     | sum of square deviations: 483973878.9913803
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | sum of deviations: 695817664.9396553
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | mean x: 1760379044.5086207
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | mean y: 2336981.5603448274
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | -- intersect: -2528590593.9349146
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | intersect: -2528590593.9349146
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | chi2: 0.0009527406747004525
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | -- intersect: -2528590593.9349146
[2025-10-13 21:17:00] 2025-10-13 19:16:27,292 | INFO     | current memory leak: 1.44 B/s (using 116 data points, chi2=0.00)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | could have reported an average CPU frequency of 2721 MHz (8 samples)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | ..............................
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . Timing measurements:
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . get job = 0 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . initial setup = 1 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . payload setup = 6 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . stage-in = 0 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . payload execution = 8660 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . stage-out = 1 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,293 | INFO     | . log creation = 0 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,294 | INFO     | ..............................
[2025-10-13 21:17:00] 2025-10-13 19:16:27,385 | INFO     | 
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | job summary report
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | --------------------------------------------------
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | PanDA job id: 6838913510
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | task id: 46676269
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | errors: (none)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | pilot state: finished 
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | transexitcode: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | exeerrorcode: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | exeerrordiag: 
[2025-10-13 21:17:00] 2025-10-13 19:16:27,386 | INFO     | exitcode: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | exitmsg: OK
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | cpuconsumptiontime: 32902 s
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | nevents: 400
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | neventsw: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | pid: 566052
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | pgrp: 566052
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | corecount: 4
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | event service: False
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | sizes: {0: 2348869, 5: 2349131, 11: 2349187, 8671: 2377694, 8673: 2386772, 8683: 2386910}
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | --------------------------------------------------
[2025-10-13 21:17:00] 2025-10-13 19:16:27,387 | INFO     | 
[2025-10-13 21:17:00] 2025-10-13 19:16:27,388 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-10-13 21:17:00] 2025-10-13 19:16:27,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | job 6838913510 has completed (purged errors)
[2025-10-13 21:17:00] 2025-10-13 19:16:27,418 | INFO     | overall cleanup function is called
[2025-10-13 21:17:00] 2025-10-13 19:16:28,428 | INFO     | --- collectZombieJob: --- 10, [566052]
[2025-10-13 21:17:00] 2025-10-13 19:16:28,428 | INFO     | zombie collector waiting for pid 566052
[2025-10-13 21:17:00] 2025-10-13 19:16:28,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:17:00] 2025-10-13 19:16:28,428 | INFO     | collected zombie processes
[2025-10-13 21:17:00] 2025-10-13 19:16:28,428 | INFO     | will attempt to kill all subprocesses of pid=566052
[2025-10-13 21:17:00] 2025-10-13 19:16:29,170 | INFO     | process IDs to be killed: [566052] (in reverse order)
[2025-10-13 21:17:00] 2025-10-13 19:16:29,423 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:17:00] 2025-10-13 19:16:29,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:17:00] 2025-10-13 19:16:29,454 | INFO     | did not find any defunct processes belonging to 566052
[2025-10-13 21:17:00] 2025-10-13 19:16:29,484 | INFO     | did not find any defunct processes belonging to 566052
[2025-10-13 21:17:00] 2025-10-13 19:16:29,484 | INFO     | ready for new job
[2025-10-13 21:17:00] 2025-10-13 19:16:29,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:17:00] 2025-10-13 19:16:29,486 | INFO     | ***************************************
[2025-10-13 21:17:00] 2025-10-13 19:16:29,489 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:17:00] 2025-10-13 19:16:29,489 | INFO     | ***************************************
[2025-10-13 21:17:00] 2025-10-13 19:16:29,489 | INFO     | 
[2025-10-13 21:17:00] 2025-10-13 19:16:29,497 | INFO     | architecture information:
[2025-10-13 21:17:00] 2025-10-13 19:16:29,498 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:17:00] 2025-10-13 19:16:29,518 | INFO     | cat /etc/os-release:
[2025-10-13 21:17:00] NAME="CentOS Linux"
[2025-10-13 21:17:00] VERSION="7 (Core)"
[2025-10-13 21:17:00] ID="centos"
[2025-10-13 21:17:00] ID_LIKE="rhel fedora"
[2025-10-13 21:17:00] VERSION_ID="7"
[2025-10-13 21:17:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:17:00] ANSI_COLOR="0;31"
[2025-10-13 21:17:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:17:00] HOME_URL="https://www.centos.org/"
[2025-10-13 21:17:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:17:00] 
[2025-10-13 21:17:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:17:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:17:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:17:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:17:00] 
[2025-10-13 21:17:00] 2025-10-13 19:16:29,519 | INFO     | ***************************************
[2025-10-13 21:17:00] 2025-10-13 19:16:30,022 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-10-13 21:17:00] 2025-10-13 19:16:30,047 | INFO     | sufficient remaining disk space (3338288496640 B)
[2025-10-13 21:17:00] 2025-10-13 19:16:30,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:17:00] 2025-10-13 19:16:30,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:17:00] 2025-10-13 19:16:30,047 | INFO     | update_server=False
[2025-10-13 21:17:00] 2025-10-13 19:16:30,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:17:00] 2025-10-13 19:16:30,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:17:00] 2025-10-13 19:16:30,120 | INFO     | aborting loop
[2025-10-13 21:17:00] 2025-10-13 19:16:30,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:17:00] 2025-10-13 19:16:30,584 | INFO     | all payload control threads have been joined
[2025-10-13 21:17:00] 2025-10-13 19:16:30,843 | INFO     | all data control threads have been joined
[2025-10-13 21:17:00] 2025-10-13 19:16:31,053 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,125 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,187 | INFO     | all job control threads have been joined
[2025-10-13 21:17:00] 2025-10-13 19:16:31,408 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,557 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,589 | INFO     | [payload] control thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,786 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,823 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:31,849 | INFO     | [data] control thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,192 | INFO     | [job] control thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,388 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:17:00] 2025-10-13 19:16:32,444 | INFO     | [job] validate thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,445 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:32,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:17:00] 2025-10-13 19:16:32,526 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:33,406 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:36,481 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:17:00] 2025-10-13 19:16:41,698 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:17:00] 2025-10-13 19:16:42,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22392857519936)>', '<ExcThread(monitor, started 22392009119488)>']
[2025-10-13 21:17:00] 2025-10-13 19:16:47,763 | INFO     | all workflow threads have been joined
[2025-10-13 21:17:00] 2025-10-13 19:16:47,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:17:00] 2025-10-13 19:16:47,763 | INFO     | traces error code: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:47,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:17:00] 2025-10-13 19:16:59,628 | INFO     | PID=558253 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:17:00] 2025-10-13 19:16:59,629 | INFO     | .. there are 8 such processes running
[2025-10-13 21:17:00] 2025-10-13 19:16:59,630 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:17:00] 2025-10-13 19:16:59,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:17:00] 2025-10-13 19:16:59,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:17:00] 2025-10-13 19:16:59,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:17:00] 2025-10-13 19:16:59,630 | INFO     | [monitor] control thread has ended
[2025-10-13 21:17:00] 2025-10-13 19:16:59,785 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:17:00] 2025-10-13 19:16:59,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:17:00] 2025-10-13 19:16:59,793 [wrapper] pilotpid: 558253
[2025-10-13 21:17:00] 2025-10-13 19:16:59,796 [wrapper] Pilot exit status: 0
[2025-10-13 21:17:00] 2025-10-13 19:16:59,812 [wrapper] pandaids: 6838913510 6838913510
[2025-10-13 21:17:00] 2025-10-13 19:16:59,986 [wrapper] cleanup supervisor_pilot 1087625 558254
[2025-10-13 21:17:00] 2025-10-13 19:16:59,990 [wrapper] Test setup, not cleaning
[2025-10-13 21:17:00] 2025-10-13 19:16:59,994 [wrapper] apfmon messages muted
[2025-10-13 21:17:00] 2025-10-13 19:16:59,997 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:17:00] 2025-10-13 19:17:00,001 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:17:00]  *** Error codes and diagnostics ***
[2025-10-13 21:17:00]     "exeErrorCode": 0,
[2025-10-13 21:17:00]     "exeErrorDiag": "",
[2025-10-13 21:17:00]     "pilotErrorCode": 0,
[2025-10-13 21:17:00]     "pilotErrorDiag": "",
[2025-10-13 21:17:00]  *** Listing of results directory ***
[2025-10-13 21:17:00] total 616932
[2025-10-13 21:17:00] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:36 pilot3.tar.gz
[2025-10-13 21:17:00] -rwx------ 1 boinc boinc     36292 Oct 11 22:52 runpilot2-wrapper.sh
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:52 queuedata.json
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc       100 Oct 13 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:17:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 15:54 run_atlas
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc       105 Oct 13 15:54 job.xml
[2025-10-13 21:17:00] -rw-r--r-- 3 boinc boinc 218767141 Oct 13 15:54 EVNT.46676267._002604.pool.root.1
[2025-10-13 21:17:00] -rw-r--r-- 3 boinc boinc 218767141 Oct 13 15:54 ATLAS.root_0
[2025-10-13 21:17:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:54 start_atlas.sh
[2025-10-13 21:17:00] drwxrwx--x 2 boinc boinc      4096 Oct 13 15:54 shared
[2025-10-13 21:17:00] -rw-r--r-- 2 boinc boinc    569679 Oct 13 15:54 input.tar.gz
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc         0 Oct 13 15:54 boinc_lockfile
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc      6693 Oct 13 18:51 init_data.xml
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:51 pandaJob.out
[2025-10-13 21:17:00] -rw------- 1 boinc boinc    972783 Oct 13 18:51 agis_schedconf.cvmfs.json
[2025-10-13 21:17:00] -rw------- 1 boinc boinc 187226475 Oct 13 21:15 HITS.46676269._064843.pool.root.1
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:16 boinc_task_state.xml
[2025-10-13 21:17:00] -rw------- 1 boinc boinc      1026 Oct 13 21:16 memory_monitor_summary.json
[2025-10-13 21:17:00] -rw------- 1 boinc boinc   1560580 Oct 13 21:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:17:00] -rw------- 1 boinc boinc    337045 Oct 13 21:16 log.46676269._064843.job.log.tgz.1
[2025-10-13 21:17:00] -rw------- 1 boinc boinc      7780 Oct 13 21:16 heartbeat.json
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:16 boinc_mmap_file
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:16 wrapper_checkpoint.txt
[2025-10-13 21:17:00] -rw------- 1 boinc boinc        97 Oct 13 21:16 pilot_heartbeat.json
[2025-10-13 21:17:00] -rw------- 1 boinc boinc       822 Oct 13 21:16 pilotlog.txt
[2025-10-13 21:17:00] -rw------- 1 boinc boinc   1201901 Oct 13 21:17 log.46676269._064843.job.log.1
[2025-10-13 21:17:00] -rw------- 1 boinc boinc       357 Oct 13 21:17 output.list
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:17 runtime_log
[2025-10-13 21:17:00] -rw------- 1 boinc boinc   1556480 Oct 13 21:17 result.tar.gz
[2025-10-13 21:17:00] -rw------- 1 boinc boinc       791 Oct 13 21:17 wzbLDmokvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUbhNDmPQcsWo.diag
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc      9161 Oct 13 21:17 runtime_log.err
[2025-10-13 21:17:00] -rw-r--r-- 1 boinc boinc     22873 Oct 13 21:17 stderr.txt
[2025-10-13 21:17:00] HITS file was successfully produced:
[2025-10-13 21:17:00] -rw------- 1 boinc boinc 187226475 Oct 13 21:15 shared/HITS.pool.root.1
[2025-10-13 21:17:00]  *** Contents of shared directory: ***
[2025-10-13 21:17:00] total 398584
[2025-10-13 21:17:00] -rw-r--r-- 3 boinc boinc 218767141 Oct 13 15:54 ATLAS.root_0
[2025-10-13 21:17:00] -rw-r--r-- 2 boinc boinc     15120 Oct 13 15:54 start_atlas.sh
[2025-10-13 21:17:00] -rw-r--r-- 2 boinc boinc    569679 Oct 13 15:54 input.tar.gz
[2025-10-13 21:17:00] -rw------- 1 boinc boinc 187226475 Oct 13 21:15 HITS.pool.root.1
[2025-10-13 21:17:00] -rw------- 1 boinc boinc   1556480 Oct 13 21:17 result.tar.gz
21:17:01 (553880): run_atlas exited; CPU time 33460.988071
21:17:01 (553880): called boinc_finish(0)

</stderr_txt>
]]>

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