Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:04:23 (1317207): wrapper (7.7.26015): starting
21:04:23 (1317207): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:04:23] Arguments: --nthreads 8
[2025-10-11 21:04:23] Threads: 8
[2025-10-11 21:04:23] Checking for CVMFS
[2025-10-11 21:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:04:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:04:26] 2.13.2.0 999403 128560 338856 151601 1 492 16571681 32935937 15801 16776704 0 188297422 99.558 224153260 29261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:04:26] CVMFS is ok
[2025-10-11 21:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:04:26] Further information can be found at the LHC@home message board.
[2025-10-11 21:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:04:26] Checking for apptainer binary...
[2025-10-11 21:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:04:26] Running /usr/bin/apptainer --version
[2025-10-11 21:04:26] apptainer version 1.4.3-1.el9
[2025-10-11 21:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:04:26] c6-2-29-4.aglt2.org
[2025-10-11 21:04:26] apptainer works
[2025-10-11 21:04:26] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:04:26] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:04:26] Starting ATLAS job with PandaID=6838773022
[2025-10-11 21:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:20:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:20:30] 2025-10-12 09:19:31,934 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:20:30] 2025-10-12 09:19:31,935 | INFO     | sum of square deviations: 35155659409.082664
[2025-10-12 05:20:30] 2025-10-12 09:19:31,942 | INFO     | sum of deviations: -213914400069.21887
[2025-10-12 05:20:30] 2025-10-12 09:19:31,942 | INFO     | mean x: 1760245985.268595
[2025-10-12 05:20:30] 2025-10-12 09:19:31,942 | INFO     | mean y: 2052194.1632231404
[2025-10-12 05:20:30] 2025-10-12 09:19:31,943 | INFO     | -- intersect: 10712759097.180403
[2025-10-12 05:20:30] 2025-10-12 09:19:31,943 | INFO     | intersect: 10712759097.180403
[2025-10-12 05:20:30] 2025-10-12 09:19:31,944 | INFO     | chi2: 7.903299872001801
[2025-10-12 05:20:30] 2025-10-12 09:19:31,945 | INFO     | sum of square deviations: 34077379181.649345
[2025-10-12 05:20:30] 2025-10-12 09:19:31,951 | INFO     | sum of deviations: -107553724769.52817
[2025-10-12 05:20:30] 2025-10-12 09:19:31,951 | INFO     | mean x: 1760245832.7745302
[2025-10-12 05:20:30] 2025-10-12 09:19:31,952 | INFO     | mean y: 2067215.8747390397
[2025-10-12 05:20:30] 2025-10-12 09:19:31,952 | INFO     | -- intersect: 5557687993.393041
[2025-10-12 05:20:30] 2025-10-12 09:19:31,952 | INFO     | intersect: 5557687993.393041
[2025-10-12 05:20:30] 2025-10-12 09:19:31,953 | INFO     | chi2: 5.124217211480502
[2025-10-12 05:20:30] 2025-10-12 09:19:31,953 | INFO     | current chi2=5.124217211480502 (change=35.16357351397568 %)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,954 | INFO     | sum of square deviations: 33021378441.681477
[2025-10-12 05:20:30] 2025-10-12 09:19:31,960 | INFO     | sum of deviations: -77335736005.75536
[2025-10-12 05:20:30] 2025-10-12 09:19:31,960 | INFO     | mean x: 1760245680.2805908
[2025-10-12 05:20:30] 2025-10-12 09:19:31,961 | INFO     | mean y: 2071579.9831223628
[2025-10-12 05:20:30] 2025-10-12 09:19:31,961 | INFO     | -- intersect: 4124549249.2865953
[2025-10-12 05:20:30] 2025-10-12 09:19:31,961 | INFO     | intersect: 4124549249.2865953
[2025-10-12 05:20:30] 2025-10-12 09:19:31,962 | INFO     | chi2: 4.944475578111323
[2025-10-12 05:20:30] 2025-10-12 09:19:31,962 | INFO     | current chi2=4.944475578111323 (change=3.507689583620282 %)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,962 | INFO     | right removable region: 473
[2025-10-12 05:20:30] 2025-10-12 09:19:31,963 | INFO     | sum of square deviations: 34077181541.09818
[2025-10-12 05:20:30] 2025-10-12 09:19:31,970 | INFO     | sum of deviations: -317437598330.29016
[2025-10-12 05:20:30] 2025-10-12 09:19:31,974 | INFO     | mean x: 1760246137.776618
[2025-10-12 05:20:30] 2025-10-12 09:19:31,974 | INFO     | mean y: 2066810.2776617955
[2025-10-12 05:20:30] 2025-10-12 09:19:31,974 | INFO     | -- intersect: 16399206514.219612
[2025-10-12 05:20:30] 2025-10-12 09:19:31,975 | INFO     | intersect: 16399206514.219612
[2025-10-12 05:20:30] 2025-10-12 09:19:31,975 | INFO     | chi2: 5.22830895028508
[2025-10-12 05:20:30] 2025-10-12 09:19:31,976 | INFO     | current chi2=5.22830895028508 (change=33.846506712887525 %)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,977 | INFO     | sum of square deviations: 33021041965.681488
[2025-10-12 05:20:30] 2025-10-12 09:19:31,982 | INFO     | sum of deviations: -371503371144.7002
[2025-10-12 05:20:30] 2025-10-12 09:19:31,983 | INFO     | mean x: 1760246290.2805908
[2025-10-12 05:20:30] 2025-10-12 09:19:31,983 | INFO     | mean y: 2074620.3586497891
[2025-10-12 05:20:30] 2025-10-12 09:19:31,983 | INFO     | -- intersect: 19805732892.675556
[2025-10-12 05:20:30] 2025-10-12 09:19:31,983 | INFO     | intersect: 19805732892.675556
[2025-10-12 05:20:30] 2025-10-12 09:19:31,985 | INFO     | chi2: 4.420928690167639
[2025-10-12 05:20:30] 2025-10-12 09:19:31,985 | INFO     | current chi2=4.420928690167639 (change=15.44247418801481 %)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,985 | INFO     | left removable region: 20
[2025-10-12 05:20:30] 2025-10-12 09:19:31,986 | INFO     | sum of square deviations: 28823579708.905056
[2025-10-12 05:20:30] 2025-10-12 09:19:31,990 | INFO     | sum of deviations: -236239927468.02
[2025-10-12 05:20:30] 2025-10-12 09:19:31,991 | INFO     | mean x: 1760246259.8057394
[2025-10-12 05:20:30] 2025-10-12 09:19:31,991 | INFO     | mean y: 2097585.238410596
[2025-10-12 05:20:30] 2025-10-12 09:19:31,991 | INFO     | -- intersect: 14429190019.35017
[2025-10-12 05:20:30] 2025-10-12 09:19:31,991 | INFO     | intersect: 14429190019.35017
[2025-10-12 05:20:30] 2025-10-12 09:19:31,992 | INFO     | chi2: 1.1663833527163483
[2025-10-12 05:20:30] 2025-10-12 09:19:31,992 | INFO     | -- intersect: 14429190019.35017
[2025-10-12 05:20:30] 2025-10-12 09:19:31,992 | INFO     | current memory leak: -8.20 B/s (using 453 data points, chi2=1.17)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | could have reported an average CPU frequency of 2678 MHz (20 samples)
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | ..............................
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . Timing measurements:
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . get job = 0 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . initial setup = 6 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . payload setup = 38 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . stage-in = 0 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . payload execution = 29504 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . stage-out = 6 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | . log creation = 1 s
[2025-10-12 05:20:30] 2025-10-12 09:19:31,993 | INFO     | ..............................
[2025-10-12 05:20:30] 2025-10-12 09:19:32,249 | INFO     | 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,249 | INFO     | job summary report
[2025-10-12 05:20:30] 2025-10-12 09:19:32,249 | INFO     | --------------------------------------------------
[2025-10-12 05:20:30] 2025-10-12 09:19:32,249 | INFO     | PanDA job id: 6838773022
[2025-10-12 05:20:30] 2025-10-12 09:19:32,249 | INFO     | task id: 46676269
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | errors: (none)
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | pilot state: finished 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | transexitcode: 0
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | exeerrorcode: 0
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | exeerrordiag: 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | exitcode: 0
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | exitmsg: OK
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | cpuconsumptiontime: 46885 s
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | nevents: 400
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | neventsw: 0
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | pid: 1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | pgrp: 1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:32,250 | INFO     | corecount: 8
[2025-10-12 05:20:30] 2025-10-12 09:19:32,251 | INFO     | event service: False
[2025-10-12 05:20:30] 2025-10-12 09:19:32,251 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348740, 3: 2348939, 14: 2348939, 25: 2348967, 30: 2349385, 36: 2349413, 29547: 2386742, 29548: 2386741, 29555: 2395795, 29556: 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,251 | INFO     | --------------------------------------------------
[2025-10-12 05:20:30] 2025-10-12 09:19:32,251 | INFO     | 
[2025-10-12 05:20:30] 2025-10-12 09:19:32,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 05:20:30] 2025-10-12 09:19:32,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | job 6838773022 has completed (purged errors)
[2025-10-12 05:20:30] 2025-10-12 09:19:32,309 | INFO     | overall cleanup function is called
[2025-10-12 05:20:30] 2025-10-12 09:19:32,342 | INFO     | PID=1328099 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:20:30] 2025-10-12 09:19:32,343 | INFO     | .. there are 17 such processes running
[2025-10-12 05:20:30] 2025-10-12 09:19:33,327 | INFO     | --- collectZombieJob: --- 10, [1336013]
[2025-10-12 05:20:30] 2025-10-12 09:19:33,327 | INFO     | zombie collector waiting for pid 1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:33,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:20:30] 2025-10-12 09:19:33,327 | INFO     | collected zombie processes
[2025-10-12 05:20:30] 2025-10-12 09:19:33,327 | INFO     | will attempt to kill all subprocesses of pid=1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:34,317 | INFO     | process IDs to be killed: [1336013] (in reverse order)
[2025-10-12 05:20:30] 2025-10-12 09:19:34,488 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:20:30] 2025-10-12 09:19:34,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:20:30] 2025-10-12 09:19:34,542 | INFO     | did not find any defunct processes belonging to 1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:34,576 | INFO     | did not find any defunct processes belonging to 1336013
[2025-10-12 05:20:30] 2025-10-12 09:19:34,577 | INFO     | ready for new job
[2025-10-12 05:20:30] 2025-10-12 09:19:34,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:20:30] 2025-10-12 09:19:34,581 | INFO     | ***************************************
[2025-10-12 05:20:30] 2025-10-12 09:19:34,581 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:20:30] 2025-10-12 09:19:34,582 | INFO     | ***************************************
[2025-10-12 05:20:30] 2025-10-12 09:19:34,582 | INFO     | 
[2025-10-12 05:20:30] 2025-10-12 09:19:34,604 | INFO     | architecture information:
[2025-10-12 05:20:30] 2025-10-12 09:19:34,605 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:20:30] 2025-10-12 09:19:34,698 | INFO     | cat /etc/os-release:
[2025-10-12 05:20:30] NAME="CentOS Linux"
[2025-10-12 05:20:30] VERSION="7 (Core)"
[2025-10-12 05:20:30] ID="centos"
[2025-10-12 05:20:30] ID_LIKE="rhel fedora"
[2025-10-12 05:20:30] VERSION_ID="7"
[2025-10-12 05:20:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:20:30] ANSI_COLOR="0;31"
[2025-10-12 05:20:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:20:30] HOME_URL="https://www.centos.org/"
[2025-10-12 05:20:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:20:30] 
[2025-10-12 05:20:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:20:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:20:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:20:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:20:30] 
[2025-10-12 05:20:30] 2025-10-12 09:19:34,699 | INFO     | ***************************************
[2025-10-12 05:20:30] 2025-10-12 09:19:35,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 05:20:30] 2025-10-12 09:19:35,393 | INFO     | sufficient remaining disk space (75421974528 B)
[2025-10-12 05:20:30] 2025-10-12 09:19:35,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:20:30] 2025-10-12 09:19:35,394 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:20:30] 2025-10-12 09:19:35,394 | INFO     | update_server=False
[2025-10-12 05:20:30] 2025-10-12 09:19:35,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:20:30] 2025-10-12 09:19:35,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:20:30] 2025-10-12 09:19:35,461 | INFO     | all data control threads have been joined
[2025-10-12 05:20:30] 2025-10-12 09:19:35,689 | INFO     | all job control threads have been joined
[2025-10-12 05:20:30] 2025-10-12 09:19:35,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:20:30] 2025-10-12 09:19:35,753 | INFO     | aborting loop
[2025-10-12 05:20:30] 2025-10-12 09:19:35,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:20:30] 2025-10-12 09:19:36,400 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,467 | INFO     | [data] control thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,471 | INFO     | all payload control threads have been joined
[2025-10-12 05:20:30] 2025-10-12 09:19:36,495 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,521 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,695 | INFO     | [job] control thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,759 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:36,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:20:30] 2025-10-12 09:19:37,424 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,425 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,446 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,477 | INFO     | [payload] control thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,773 | INFO     | [job] validate thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:37,938 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:38,273 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:19:39,419 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:20:30] 2025-10-12 09:20:04,911 | INFO     | PID=1328099 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:20:30] 2025-10-12 09:20:04,911 | INFO     | .. there are 16 such processes running
[2025-10-12 05:20:30] 2025-10-12 09:20:04,911 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:20:30] 2025-10-12 09:20:04,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:20:30] 2025-10-12 09:20:04,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:20:30] 2025-10-12 09:20:21,628 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:20:30] 2025-10-12 09:20:22,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663744730944)>', '<ExcThread(monitor, started 139663243196160)>']
[2025-10-12 05:20:30] 2025-10-12 09:20:23,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:20:30] 2025-10-12 09:20:23,021 | INFO     | [monitor] control thread has ended
[2025-10-12 05:20:30] 2025-10-12 09:20:24,027 [wrapper] supervise_pilot (15 min periods counter: 34)
[2025-10-12 05:20:30] 2025-10-12 09:20:27,687 | INFO     | all workflow threads have been joined
[2025-10-12 05:20:30] 2025-10-12 09:20:27,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:20:30] 2025-10-12 09:20:27,688 | INFO     | traces error code: 0
[2025-10-12 05:20:30] 2025-10-12 09:20:27,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:20:30] 2025-10-12 09:20:28,429 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:20:30] 2025-10-12 09:20:28,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:20:30] 2025-10-12 09:20:28,505 [wrapper] pilotpid: 1328099
[2025-10-12 05:20:30] 2025-10-12 09:20:28,550 [wrapper] Pilot exit status: 0
[2025-10-12 05:20:30] 2025-10-12 09:20:28,779 [wrapper] pandaids: 6838773022
[2025-10-12 05:20:30] 2025-10-12 09:20:29,274 [wrapper] cleanup supervisor_pilot 2480732 1328100
[2025-10-12 05:20:30] 2025-10-12 09:20:29,314 [wrapper] Test setup, not cleaning
[2025-10-12 05:20:30] 2025-10-12 09:20:29,342 [wrapper] apfmon messages muted
[2025-10-12 05:20:30] 2025-10-12 09:20:29,392 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:20:30] 2025-10-12 09:20:29,436 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:20:30]  *** Error codes and diagnostics ***
[2025-10-12 05:20:30]     "exeErrorCode": 0,
[2025-10-12 05:20:30]     "exeErrorDiag": "",
[2025-10-12 05:20:30]     "pilotErrorCode": 0,
[2025-10-12 05:20:30]     "pilotErrorDiag": "",
[2025-10-12 05:20:30]  *** Listing of results directory ***
[2025-10-12 05:20:30] total 415464
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:21 queuedata.json
[2025-10-12 05:20:30] -rwx------. 1 boincer umatlas     36292 Oct 11 14:23 runpilot2-wrapper.sh
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:20:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:04 run_atlas
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:04 job.xml
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas 219679031 Oct 11 21:04 EVNT.46676267._002509.pool.root.1
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:04 start_atlas.sh
[2025-10-12 05:20:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:04 shared
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 21:04 input.tar.gz
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:04 boinc_lockfile
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:04 pandaJob.out
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas    975496 Oct 11 21:05 agis_schedconf.cvmfs.json
[2025-10-12 05:20:30] drwx------. 5 boincer umatlas      4096 Oct 11 21:05 pilot3
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 05:11 init_data.xml
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas 193508000 Oct 12 05:14 HITS.46676269._062453.pool.root.1
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:15 boinc_task_state.xml
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas      1048 Oct 12 05:18 memory_monitor_summary.json
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas    634930 Oct 12 05:19 log.46676269._062453.job.log.tgz.1
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas        95 Oct 12 05:19 pilot_heartbeat.json
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas      7846 Oct 12 05:19 heartbeat.json
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 05:20 boinc_mmap_file
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 05:20 wrapper_checkpoint.txt
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas      4824 Oct 12 05:20 pilotlog.txt
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas   3533708 Oct 12 05:20 log.46676269._062453.job.log.1
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas       357 Oct 12 05:20 output.list
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 05:20 runtime_log
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas   4188160 Oct 12 05:20 result.tar.gz
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 05:20 runtime_log.err
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas       660 Oct 12 05:20 DxrLDmrQtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjDhNDm8CRFEn.diag
[2025-10-12 05:20:30] -rw-r--r--. 1 boincer umatlas     21145 Oct 12 05:20 stderr.txt
[2025-10-12 05:20:30] HITS file was successfully produced:
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas 193508000 Oct 12 05:14 shared/HITS.pool.root.1
[2025-10-12 05:20:30]  *** Contents of shared directory: ***
[2025-10-12 05:20:30] total 408184
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas 219679031 Oct 11 21:04 ATLAS.root_0
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:04 start_atlas.sh
[2025-10-12 05:20:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 21:04 input.tar.gz
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas 193508000 Oct 12 05:14 HITS.pool.root.1
[2025-10-12 05:20:30] -rw-------. 1 boincer umatlas   4188160 Oct 12 05:20 result.tar.gz
05:20:31 (1317207): run_atlas exited; CPU time 47769.087823
05:20:31 (1317207): called boinc_finish(0)

</stderr_txt>
]]>

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