Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:27 (355913): wrapper (7.7.26015): starting
00:03:27 (355913): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:03:28] Arguments: --nthreads 12
[2025-10-12 00:03:28] Threads: 12
[2025-10-12 00:03:28] Checking for CVMFS
[2025-10-12 00:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:29] 2.13.2.0 124252 115454 144888 151606 3 65 27733504 39288833 7527 16776704 0 67356572 99.739 43636036 35359 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:03:29] CVMFS is ok
[2025-10-12 00:03:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:29] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:29] Checking for apptainer binary...
[2025-10-12 00:03:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:29] Running /usr/bin/apptainer --version
[2025-10-12 00:03:29] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:29] c-210-29.aglt2.org
[2025-10-12 00:03:29] apptainer works
[2025-10-12 00:03:29] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:03:29] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:03:30] Starting ATLAS job with PandaID=6838913388
[2025-10-12 00:03:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:43:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:43:52] 2025-10-12 10:43:05,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:43:52] 2025-10-12 10:43:05,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:43:52] 2025-10-12 10:43:05,853 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:43:52] 2025-10-12 10:43:05,854 | INFO     | sum of square deviations: 18674166050.408245
[2025-10-12 06:43:52] 2025-10-12 10:43:05,861 | INFO     | sum of deviations: 123899708681.81645
[2025-10-12 06:43:52] 2025-10-12 10:43:05,861 | INFO     | mean x: 1760253811.7346938
[2025-10-12 06:43:52] 2025-10-12 10:43:05,861 | INFO     | mean y: 2630559.7193877553
[2025-10-12 06:43:52] 2025-10-12 10:43:05,915 | INFO     | -- intersect: -11676334588.778778
[2025-10-12 06:43:52] 2025-10-12 10:43:05,915 | INFO     | intersect: -11676334588.778778
[2025-10-12 06:43:52] 2025-10-12 10:43:05,916 | INFO     | chi2: 3.934803306547054
[2025-10-12 06:43:52] 2025-10-12 10:43:05,916 | INFO     | sum of square deviations: 17968711159.674477
[2025-10-12 06:43:52] 2025-10-12 10:43:05,974 | INFO     | sum of deviations: 179414764894.1164
[2025-10-12 06:43:52] 2025-10-12 10:43:05,975 | INFO     | mean x: 1760253659.2558138
[2025-10-12 06:43:52] 2025-10-12 10:43:05,975 | INFO     | mean y: 2642458.503875969
[2025-10-12 06:43:52] 2025-10-12 10:43:05,975 | INFO     | -- intersect: -17573214464.286755
[2025-10-12 06:43:52] 2025-10-12 10:43:05,975 | INFO     | intersect: -17573214464.286755
[2025-10-12 06:43:52] 2025-10-12 10:43:05,976 | INFO     | chi2: 2.2208424913130536
[2025-10-12 06:43:52] 2025-10-12 10:43:05,976 | INFO     | current chi2=2.2208424913130536 (change=43.55899600831811 %)
[2025-10-12 06:43:52] 2025-10-12 10:43:05,976 | INFO     | sum of square deviations: 17281209395.185936
[2025-10-12 06:43:52] 2025-10-12 10:43:06,094 | INFO     | sum of deviations: 175443877314.2252
[2025-10-12 06:43:52] 2025-10-12 10:43:06,095 | INFO     | mean x: 1760253506.7722514
[2025-10-12 06:43:52] 2025-10-12 10:43:06,095 | INFO     | mean y: 2641577.7382198954
[2025-10-12 06:43:52] 2025-10-12 10:43:06,095 | INFO     | -- intersect: -17867965346.92041
[2025-10-12 06:43:52] 2025-10-12 10:43:06,095 | INFO     | intersect: -17867965346.92041
[2025-10-12 06:43:52] 2025-10-12 10:43:06,096 | INFO     | chi2: 2.2209709294045252
[2025-10-12 06:43:52] 2025-10-12 10:43:06,096 | INFO     | current chi2=2.2209709294045252 (change=-0.005783304848230556 %)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,096 | INFO     | right removable region: 381
[2025-10-12 06:43:52] 2025-10-12 10:43:06,096 | INFO     | sum of square deviations: 17968248405.11624
[2025-10-12 06:43:52] 2025-10-12 10:43:06,141 | INFO     | sum of deviations: 31046819616.85271
[2025-10-12 06:43:52] 2025-10-12 10:43:06,141 | INFO     | mean x: 1760253964.2635658
[2025-10-12 06:43:52] 2025-10-12 10:43:06,141 | INFO     | mean y: 2650562.9328165376
[2025-10-12 06:43:52] 2025-10-12 10:43:06,142 | INFO     | -- intersect: -3038841633.534137
[2025-10-12 06:43:52] 2025-10-12 10:43:06,158 | INFO     | intersect: -3038841633.534137
[2025-10-12 06:43:52] 2025-10-12 10:43:06,159 | INFO     | chi2: 1.8920230798139572
[2025-10-12 06:43:52] 2025-10-12 10:43:06,159 | INFO     | current chi2=1.8920230798139572 (change=51.9156884750541 %)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,160 | INFO     | sum of square deviations: 17280354829.2459
[2025-10-12 06:43:52] 2025-10-12 10:43:06,182 | INFO     | sum of deviations: 6160369670.408314
[2025-10-12 06:43:52] 2025-10-12 10:43:06,182 | INFO     | mean x: 1760254116.790576
[2025-10-12 06:43:52] 2025-10-12 10:43:06,182 | INFO     | mean y: 2656064.780104712
[2025-10-12 06:43:52] 2025-10-12 10:43:06,182 | INFO     | -- intersect: -624866701.9940804
[2025-10-12 06:43:52] 2025-10-12 10:43:06,182 | INFO     | intersect: -624866701.9940804
[2025-10-12 06:43:52] 2025-10-12 10:43:06,183 | INFO     | chi2: 1.7561221751061962
[2025-10-12 06:43:52] 2025-10-12 10:43:06,183 | INFO     | current chi2=1.7561221751061962 (change=7.1828354610306455 %)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,183 | INFO     | left removable region: 20
[2025-10-12 06:43:52] 2025-10-12 10:43:06,209 | INFO     | sum of square deviations: 14583818718.321222
[2025-10-12 06:43:52] 2025-10-12 10:43:06,234 | INFO     | sum of deviations: 48948805785.30469
[2025-10-12 06:43:52] 2025-10-12 10:43:06,234 | INFO     | mean x: 1760254086.3518004
[2025-10-12 06:43:52] 2025-10-12 10:43:06,234 | INFO     | mean y: 2670389.4542936287
[2025-10-12 06:43:52] 2025-10-12 10:43:06,234 | INFO     | -- intersect: -5905407396.604582
[2025-10-12 06:43:52] 2025-10-12 10:43:06,234 | INFO     | intersect: -5905407396.604582
[2025-10-12 06:43:52] 2025-10-12 10:43:06,264 | INFO     | chi2: 0.0055996788447724
[2025-10-12 06:43:52] 2025-10-12 10:43:06,265 | INFO     | -- intersect: -5905407396.604582
[2025-10-12 06:43:52] 2025-10-12 10:43:06,265 | INFO     | current memory leak: 3.36 B/s (using 361 data points, chi2=0.01)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | ..............................
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | . Timing measurements:
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | . get job = 0 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | . initial setup = 3 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | . payload setup = 12 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,266 | INFO     | . stage-in = 0 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,267 | INFO     | . payload execution = 23862 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,267 | INFO     | . stage-out = 5 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,267 | INFO     | . log creation = 0 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,267 | INFO     | ..............................
[2025-10-12 06:43:52] 2025-10-12 10:43:06,872 | INFO     | 
[2025-10-12 06:43:52] 2025-10-12 10:43:06,873 | INFO     | job summary report
[2025-10-12 06:43:52] 2025-10-12 10:43:06,873 | INFO     | --------------------------------------------------
[2025-10-12 06:43:52] 2025-10-12 10:43:06,877 | INFO     | PanDA job id: 6838913388
[2025-10-12 06:43:52] 2025-10-12 10:43:06,877 | INFO     | task id: 46676269
[2025-10-12 06:43:52] 2025-10-12 10:43:06,877 | INFO     | errors: (none)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:43:52] 2025-10-12 10:43:06,877 | INFO     | pilot state: finished 
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | transexitcode: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | exeerrorcode: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | exeerrordiag: 
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | exitcode: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | exitmsg: OK
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | cpuconsumptiontime: 50804 s
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | nevents: 400
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | neventsw: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | pid: 373053
[2025-10-12 06:43:52] 2025-10-12 10:43:06,878 | INFO     | pgrp: 373053
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | corecount: 12
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | event service: False
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | sizes: {0: 2348636, 1: 2348835, 2: 2348835, 12: 2349153, 23878: 2384155, 23879: 2384154, 23885: 2393364, 23890: 2393420, 23927: 2393614}
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | --------------------------------------------------
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | 
[2025-10-12 06:43:52] 2025-10-12 10:43:06,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 06:43:52] 2025-10-12 10:43:06,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:43:52] 2025-10-12 10:43:06,938 | INFO     | job 6838913388 has completed (purged errors)
[2025-10-12 06:43:52] 2025-10-12 10:43:06,938 | INFO     | overall cleanup function is called
[2025-10-12 06:43:52] 2025-10-12 10:43:07,967 | INFO     | --- collectZombieJob: --- 10, [373053]
[2025-10-12 06:43:52] 2025-10-12 10:43:07,967 | INFO     | zombie collector waiting for pid 373053
[2025-10-12 06:43:52] 2025-10-12 10:43:07,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:43:52] 2025-10-12 10:43:07,967 | INFO     | collected zombie processes
[2025-10-12 06:43:52] 2025-10-12 10:43:07,967 | INFO     | will attempt to kill all subprocesses of pid=373053
[2025-10-12 06:43:52] 2025-10-12 10:43:09,120 | INFO     | process IDs to be killed: [373053] (in reverse order)
[2025-10-12 06:43:52] 2025-10-12 10:43:09,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:43:52] 2025-10-12 10:43:09,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:43:52] 2025-10-12 10:43:09,449 | INFO     | did not find any defunct processes belonging to 373053
[2025-10-12 06:43:52] 2025-10-12 10:43:09,465 | INFO     | did not find any defunct processes belonging to 373053
[2025-10-12 06:43:52] 2025-10-12 10:43:09,465 | INFO     | ready for new job
[2025-10-12 06:43:52] 2025-10-12 10:43:09,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:43:52] 2025-10-12 10:43:09,472 | INFO     | ***************************************
[2025-10-12 06:43:52] 2025-10-12 10:43:09,473 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:43:52] 2025-10-12 10:43:09,473 | INFO     | ***************************************
[2025-10-12 06:43:52] 2025-10-12 10:43:09,473 | INFO     | 
[2025-10-12 06:43:52] 2025-10-12 10:43:09,475 | INFO     | architecture information:
[2025-10-12 06:43:52] 2025-10-12 10:43:09,478 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:43:52] 2025-10-12 10:43:09,549 | INFO     | cat /etc/os-release:
[2025-10-12 06:43:52] NAME="CentOS Linux"
[2025-10-12 06:43:52] VERSION="7 (Core)"
[2025-10-12 06:43:52] ID="centos"
[2025-10-12 06:43:52] ID_LIKE="rhel fedora"
[2025-10-12 06:43:52] VERSION_ID="7"
[2025-10-12 06:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:43:52] ANSI_COLOR="0;31"
[2025-10-12 06:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:43:52] HOME_URL="https://www.centos.org/"
[2025-10-12 06:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:43:52] 
[2025-10-12 06:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:43:52] 
[2025-10-12 06:43:52] 2025-10-12 10:43:09,549 | INFO     | ***************************************
[2025-10-12 06:43:52] 2025-10-12 10:43:10,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 06:43:52] 2025-10-12 10:43:10,101 | INFO     | sufficient remaining disk space (52965670912 B)
[2025-10-12 06:43:52] 2025-10-12 10:43:10,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:43:52] 2025-10-12 10:43:10,102 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:43:52] 2025-10-12 10:43:10,102 | INFO     | update_server=False
[2025-10-12 06:43:52] 2025-10-12 10:43:10,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:43:52] 2025-10-12 10:43:10,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:43:52] 2025-10-12 10:43:10,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:43:52] 2025-10-12 10:43:10,184 | INFO     | aborting loop
[2025-10-12 06:43:52] 2025-10-12 10:43:10,184 | INFO     | all payload control threads have been joined
[2025-10-12 06:43:52] 2025-10-12 10:43:10,196 | INFO     | all data control threads have been joined
[2025-10-12 06:43:52] 2025-10-12 10:43:10,815 | INFO     | all job control threads have been joined
[2025-10-12 06:43:52] 2025-10-12 10:43:11,108 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,190 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,191 | INFO     | [payload] control thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,202 | INFO     | [data] control thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,255 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,283 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,791 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,821 | INFO     | [job] control thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,864 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:11,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:43:52] 2025-10-12 10:43:12,112 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:12,234 | INFO     | [job] validate thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:12,234 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:12,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:43:52] 2025-10-12 10:43:12,944 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:16,562 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:20,323 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:43:52] 2025-10-12 10:43:21,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:43:52] 2025-10-12 10:43:39,550 | INFO     | PID=360525 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 06:43:52] 2025-10-12 10:43:39,550 | INFO     | .. there are 7 such processes running
[2025-10-12 06:43:52] 2025-10-12 10:43:39,551 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:43:52] 2025-10-12 10:43:39,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:43:52] 2025-10-12 10:43:39,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:43:52] 2025-10-12 10:43:44,381 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:43:52] 2025-10-12 10:43:45,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758527096640)>', '<ExcThread(monitor, started 139758254659328)>']
[2025-10-12 06:43:52] 2025-10-12 10:43:46,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:43:52] 2025-10-12 10:43:46,661 | INFO     | [monitor] control thread has ended
[2025-10-12 06:43:52] 2025-10-12 10:43:51,004 | INFO     | all workflow threads have been joined
[2025-10-12 06:43:52] 2025-10-12 10:43:51,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:43:52] 2025-10-12 10:43:51,004 | INFO     | traces error code: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:51,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:43:52] 2025-10-12 10:43:51,490 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:43:52] 2025-10-12 10:43:51,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:43:52] 2025-10-12 10:43:51,526 [wrapper] pilotpid: 360525
[2025-10-12 06:43:52] 2025-10-12 10:43:51,543 [wrapper] Pilot exit status: 0
[2025-10-12 06:43:52] 2025-10-12 10:43:51,668 [wrapper] pandaids: 6838913388
[2025-10-12 06:43:52] 2025-10-12 10:43:51,874 [wrapper] cleanup supervisor_pilot  963199 360526
[2025-10-12 06:43:52] 2025-10-12 10:43:51,891 [wrapper] Test setup, not cleaning
[2025-10-12 06:43:52] 2025-10-12 10:43:51,998 [wrapper] apfmon messages muted
[2025-10-12 06:43:52] 2025-10-12 10:43:52,049 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:43:52] 2025-10-12 10:43:52,072 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:43:52]  *** Error codes and diagnostics ***
[2025-10-12 06:43:52]     "exeErrorCode": 0,
[2025-10-12 06:43:52]     "exeErrorDiag": "",
[2025-10-12 06:43:52]     "pilotErrorCode": 0,
[2025-10-12 06:43:52]     "pilotErrorDiag": "",
[2025-10-12 06:43:52]  *** Listing of results directory ***
[2025-10-12 06:43:52] total 418188
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:50 queuedata.json
[2025-10-12 06:43:52] -rwx------. 1 boincer umatlas     36292 Oct 11 16:51 runpilot2-wrapper.sh
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:43:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas 223782256 Oct 12 00:03 EVNT.46676267._001286.pool.root.1
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 06:43:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas    569690 Oct 12 00:03 input.tar.gz
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 06:43:52] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 06:36 init_data.xml
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas 193463576 Oct 12 06:40 HITS.46676269._064791.pool.root.1
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas       531 Oct 12 06:40 boinc_task_state.xml
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas      1054 Oct 12 06:42 memory_monitor_summary.json
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas    628731 Oct 12 06:42 log.46676269._064791.job.log.tgz.1
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas      7846 Oct 12 06:43 heartbeat.json
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:43 boinc_mmap_file
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:43 wrapper_checkpoint.txt
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas        95 Oct 12 06:43 pilot_heartbeat.json
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas      4894 Oct 12 06:43 pilotlog.txt
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas   2916654 Oct 12 06:43 log.46676269._064791.job.log.1
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas       357 Oct 12 06:43 output.list
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:43 runtime_log
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas   3563520 Oct 12 06:43 result.tar.gz
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 06:43 runtime_log.err
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas       661 Oct 12 06:43 qw6KDmojvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2ahNDmFJgkOm.diag
[2025-10-12 06:43:52] -rw-r--r--. 1 boincer umatlas      2145 Oct 12 06:43 stderr.txt
[2025-10-12 06:43:52] HITS file was successfully produced:
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas 193463576 Oct 12 06:40 shared/HITS.pool.root.1
[2025-10-12 06:43:52]  *** Contents of shared directory: ***
[2025-10-12 06:43:52] total 411536
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas 223782256 Oct 12 00:03 ATLAS.root_0
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 06:43:52] -rw-r--r--. 2 boincer umatlas    569690 Oct 12 00:03 input.tar.gz
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas 193463576 Oct 12 06:40 HITS.pool.root.1
[2025-10-12 06:43:52] -rw-------. 1 boincer umatlas   3563520 Oct 12 06:43 result.tar.gz
06:43:54 (355913): run_atlas exited; CPU time 51209.140633
06:43:54 (355913): called boinc_finish(0)

</stderr_txt>
]]>

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