Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:19 (1993146): wrapper (7.7.26015): starting
19:12:19 (1993146): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 19:12:19] Arguments: --nthreads 9
[2025-10-11 19:12:19] Threads: 9
[2025-10-11 19:12:19] Checking for CVMFS
[2025-10-11 19:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:12:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:12:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:12:23] 2.13.2.0 1061588 21835 406968 151599 3 871 20835301 40960000 56385 16776704 0 78777474 99.798 41593842 15751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:12:23] CVMFS is ok
[2025-10-11 19:12:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:12:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:12:23] Further information can be found at the LHC@home message board.
[2025-10-11 19:12:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:12:23] Checking for apptainer binary...
[2025-10-11 19:12:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:12:23] Running /usr/bin/apptainer --version
[2025-10-11 19:12:23] apptainer version 1.4.3-1.el9
[2025-10-11 19:12:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:12:25] c-1-1.aglt2.org
[2025-10-11 19:12:25] apptainer works
[2025-10-11 19:12:25] Set ATHENA_PROC_NUMBER=9
[2025-10-11 19:12:25] Set ATHENA_CORE_NUMBER=9
[2025-10-11 19:12:25] Starting ATLAS job with PandaID=6838853086
[2025-10-11 19:12:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:00:12 (1993146): BOINC client no longer exists - exiting
01:00:12 (1993146): timer handler: client dead, exiting
01:45:19 (3710318): wrapper (7.7.26015): starting
01:45:19 (3710318): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 01:45:19] Arguments: --nthreads 9
[2025-10-12 01:45:19] Threads: 9
[2025-10-12 01:45:19] This job has been restarted, cleaning up previous attempt
[2025-10-12 01:45:19] Checking for CVMFS
[2025-10-12 01:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:45:23] 2.13.2.0 1061588 22228 385896 151609 3 303 22595327 40960000 53339 16776704 0 80700980 99.800 42182454 15738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 01:45:23] CVMFS is ok
[2025-10-12 01:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:45:23] Further information can be found at the LHC@home message board.
[2025-10-12 01:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:45:23] Checking for apptainer binary...
[2025-10-12 01:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:45:23] Running /usr/bin/apptainer --version
[2025-10-12 01:45:23] apptainer version 1.4.3-1.el9
[2025-10-12 01:45:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:45:24] c-1-1.aglt2.org
[2025-10-12 01:45:24] apptainer works
[2025-10-12 01:45:24] Set ATHENA_PROC_NUMBER=9
[2025-10-12 01:45:24] Set ATHENA_CORE_NUMBER=9
[2025-10-12 01:45:25] Starting ATLAS job with PandaID=6838853086
[2025-10-12 01:45:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:40:08 (3710318): BOINC client no longer exists - exiting
12:40:08 (3710318): timer handler: client dead, exiting
12:46:00 (2081615): wrapper (7.7.26015): starting
12:46:00 (2081615): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 12:46:00] Arguments: --nthreads 9
[2025-10-12 12:46:00] Threads: 9
[2025-10-12 12:46:00] This job has been restarted, cleaning up previous attempt
[2025-10-12 12:46:00] Checking for CVMFS
[2025-10-12 12:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:46:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:46:04] 2.13.2.0 1061588 22889 393184 151627 0 181 25288485 40960000 52160 16776704 0 82973543 99.802 42979410 15743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:46:04] CVMFS is ok
[2025-10-12 12:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:46:04] Further information can be found at the LHC@home message board.
[2025-10-12 12:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:46:04] Checking for apptainer binary...
[2025-10-12 12:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:46:04] Running /usr/bin/apptainer --version
[2025-10-12 12:46:04] apptainer version 1.4.3-1.el9
[2025-10-12 12:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:46:05] c-1-1.aglt2.org
[2025-10-12 12:46:05] apptainer works
[2025-10-12 12:46:05] Set ATHENA_PROC_NUMBER=9
[2025-10-12 12:46:05] Set ATHENA_CORE_NUMBER=9
[2025-10-12 12:46:05] Starting ATLAS job with PandaID=6838853086
[2025-10-12 12:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:19:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:19:54] 2025-10-13 03:19:12,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:19:54] 2025-10-13 03:19:12,218 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:19:54] 2025-10-13 03:19:12,278 | INFO     | sum of square deviations: 73188977559.63918
[2025-10-12 23:19:54] 2025-10-13 03:19:12,481 | INFO     | sum of deviations: 174770474024.75916
[2025-10-12 23:19:54] 2025-10-13 03:19:12,481 | INFO     | mean x: 1760306637.0469255
[2025-10-12 23:19:54] 2025-10-13 03:19:12,481 | INFO     | mean y: 2533772.215210356
[2025-10-12 23:19:54] 2025-10-13 03:19:12,481 | INFO     | -- intersect: -4200962924.1954994
[2025-10-12 23:19:54] 2025-10-13 03:19:12,481 | INFO     | intersect: -4200962924.1954994
[2025-10-12 23:19:54] 2025-10-13 03:19:12,631 | INFO     | chi2: 4.580127348700379
[2025-10-12 23:19:54] 2025-10-13 03:19:12,632 | INFO     | sum of square deviations: 71426916521.83041
[2025-10-12 23:19:54] 2025-10-13 03:19:12,911 | INFO     | sum of deviations: 261114726358.06366
[2025-10-12 23:19:54] 2025-10-13 03:19:12,912 | INFO     | mean x: 1760306484.548124
[2025-10-12 23:19:54] 2025-10-13 03:19:12,912 | INFO     | mean y: 2541207.7944535073
[2025-10-12 23:19:54] 2025-10-13 03:19:12,912 | INFO     | -- intersect: -6432595130.180135
[2025-10-12 23:19:54] 2025-10-13 03:19:12,912 | INFO     | intersect: -6432595130.180135
[2025-10-12 23:19:54] 2025-10-13 03:19:12,948 | INFO     | chi2: 2.8917937049789786
[2025-10-12 23:19:54] 2025-10-13 03:19:12,948 | INFO     | current chi2=2.8917937049789786 (change=36.86215502720614 %)
[2025-10-12 23:19:54] 2025-10-13 03:19:12,949 | INFO     | sum of square deviations: 69693367524.51978
[2025-10-12 23:19:54] 2025-10-13 03:19:13,058 | INFO     | sum of deviations: 258576262144.49338
[2025-10-12 23:19:54] 2025-10-13 03:19:13,059 | INFO     | mean x: 1760306332.0493422
[2025-10-12 23:19:54] 2025-10-13 03:19:13,069 | INFO     | mean y: 2540984.4835526315
[2025-10-12 23:19:54] 2025-10-13 03:19:13,069 | INFO     | -- intersect: -6528545799.498603
[2025-10-12 23:19:54] 2025-10-13 03:19:13,069 | INFO     | intersect: -6528545799.498603
[2025-10-12 23:19:54] 2025-10-13 03:19:13,071 | INFO     | chi2: 2.8918958490779376
[2025-10-12 23:19:54] 2025-10-13 03:19:13,071 | INFO     | current chi2=2.8918958490779376 (change=-0.0035322055920920677 %)
[2025-10-12 23:19:54] 2025-10-13 03:19:13,071 | INFO     | right removable region: 607
[2025-10-12 23:19:54] 2025-10-13 03:19:13,072 | INFO     | sum of square deviations: 71426785615.63138
[2025-10-12 23:19:54] 2025-10-13 03:19:13,168 | INFO     | sum of deviations: 12422268253.10434
[2025-10-12 23:19:54] 2025-10-13 03:19:13,168 | INFO     | mean x: 1760306789.5513866
[2025-10-12 23:19:54] 2025-10-13 03:19:13,168 | INFO     | mean y: 2547802.171288744
[2025-10-12 23:19:54] 2025-10-13 03:19:13,168 | INFO     | -- intersect: -303597895.95995593
[2025-10-12 23:19:54] 2025-10-13 03:19:13,169 | INFO     | intersect: -303597895.95995593
[2025-10-12 23:19:54] 2025-10-13 03:19:13,170 | INFO     | chi2: 2.023850408668724
[2025-10-12 23:19:54] 2025-10-13 03:19:13,176 | INFO     | current chi2=2.023850408668724 (change=55.812355103117476 %)
[2025-10-12 23:19:54] 2025-10-13 03:19:13,177 | INFO     | sum of square deviations: 69693180376.31584
[2025-10-12 23:19:54] 2025-10-13 03:19:13,230 | INFO     | sum of deviations: -42645154165.947365
[2025-10-12 23:19:54] 2025-10-13 03:19:13,230 | INFO     | mean x: 1760306942.0526316
[2025-10-12 23:19:54] 2025-10-13 03:19:13,230 | INFO     | mean y: 2552642.1858552634
[2025-10-12 23:19:54] 2025-10-13 03:19:13,230 | INFO     | -- intersect: 1079681860.8250544
[2025-10-12 23:19:54] 2025-10-13 03:19:13,230 | INFO     | intersect: 1079681860.8250544
[2025-10-12 23:19:54] 2025-10-13 03:19:13,232 | INFO     | chi2: 1.7530983541691656
[2025-10-12 23:19:54] 2025-10-13 03:19:13,232 | INFO     | current chi2=1.7530983541691656 (change=13.378066547796758 %)
[2025-10-12 23:19:54] 2025-10-13 03:19:13,246 | INFO     | left removable region: 20
[2025-10-12 23:19:54] 2025-10-13 03:19:13,247 | INFO     | sum of square deviations: 62718426213.16476
[2025-10-12 23:19:54] 2025-10-13 03:19:13,277 | INFO     | sum of deviations: 34208186181.306656
[2025-10-12 23:19:54] 2025-10-13 03:19:13,277 | INFO     | mean x: 1760306911.551959
[2025-10-12 23:19:54] 2025-10-13 03:19:13,278 | INFO     | mean y: 2561098.7768313456
[2025-10-12 23:19:54] 2025-10-13 03:19:13,278 | INFO     | -- intersect: -957553977.4839731
[2025-10-12 23:19:54] 2025-10-13 03:19:13,278 | INFO     | intersect: -957553977.4839731
[2025-10-12 23:19:54] 2025-10-13 03:19:13,281 | INFO     | chi2: 0.007105277329668483
[2025-10-12 23:19:54] 2025-10-13 03:19:13,282 | INFO     | -- intersect: -957553977.4839731
[2025-10-12 23:19:54] 2025-10-13 03:19:13,282 | INFO     | current memory leak: 0.55 B/s (using 587 data points, chi2=0.01)
[2025-10-12 23:19:54] 2025-10-13 03:19:13,296 | INFO     | could have reported an average CPU frequency of 1752 MHz (24 samples)
[2025-10-12 23:19:54] 2025-10-13 03:19:13,296 | INFO     | ..............................
[2025-10-12 23:19:54] 2025-10-13 03:19:13,296 | INFO     | . Timing measurements:
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . get job = 1 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . initial setup = 5 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . payload setup = 47 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . stage-in = 0 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . payload execution = 37705 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . stage-out = 13 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | . log creation = 1 s
[2025-10-12 23:19:54] 2025-10-13 03:19:13,297 | INFO     | ..............................
[2025-10-12 23:19:54] 2025-10-13 03:19:13,919 | INFO     | time since job start (37910s) is within the limit (172800.0s)
[2025-10-12 23:19:54] 2025-10-13 03:19:14,130 | INFO     | 
[2025-10-12 23:19:54] 2025-10-13 03:19:14,130 | INFO     | job summary report
[2025-10-12 23:19:54] 2025-10-13 03:19:14,130 | INFO     | --------------------------------------------------
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | PanDA job id: 6838853086
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | task id: 46676269
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | errors: (none)
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | pilot state: finished 
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | transexitcode: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | exeerrorcode: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | exeerrordiag: 
[2025-10-12 23:19:54] 2025-10-13 03:19:14,131 | INFO     | exitcode: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:14,132 | INFO     | exitmsg: OK
[2025-10-12 23:19:54] 2025-10-13 03:19:14,132 | INFO     | cpuconsumptiontime: 69471 s
[2025-10-12 23:19:54] 2025-10-13 03:19:14,132 | INFO     | nevents: 400
[2025-10-12 23:19:54] 2025-10-13 03:19:14,132 | INFO     | neventsw: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:14,132 | INFO     | pid: 2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:14,156 | INFO     | pgrp: 2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:14,156 | INFO     | corecount: 9
[2025-10-12 23:19:54] 2025-10-13 03:19:14,156 | INFO     | event service: False
[2025-10-12 23:19:54] 2025-10-13 03:19:14,156 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348913, 4: 2348941, 15: 2348969, 27: 2349125, 38: 2349153, 40: 2349443, 49: 2349471, 37760: 2389095, 37761: 2389402
[2025-10-12 23:19:54] 2025-10-13 03:19:14,157 | INFO     | --------------------------------------------------
[2025-10-12 23:19:54] 2025-10-13 03:19:14,157 | INFO     | 
[2025-10-12 23:19:54] 2025-10-13 03:19:14,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:19:54] 2025-10-13 03:19:14,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:19:54] 2025-10-13 03:19:14,376 | INFO     | job 6838853086 has completed (purged errors)
[2025-10-12 23:19:54] 2025-10-13 03:19:14,400 | INFO     | overall cleanup function is called
[2025-10-12 23:19:54] 2025-10-13 03:19:15,445 | INFO     | --- collectZombieJob: --- 10, [2127958]
[2025-10-12 23:19:54] 2025-10-13 03:19:15,445 | INFO     | zombie collector waiting for pid 2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:15,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:19:54] 2025-10-13 03:19:15,446 | INFO     | collected zombie processes
[2025-10-12 23:19:54] 2025-10-13 03:19:15,446 | INFO     | will attempt to kill all subprocesses of pid=2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:19,710 | INFO     | process IDs to be killed: [2127958] (in reverse order)
[2025-10-12 23:19:54] 2025-10-13 03:19:20,900 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:19:54] 2025-10-13 03:19:20,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:19:54] 2025-10-13 03:19:21,087 | INFO     | did not find any defunct processes belonging to 2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:21,157 | INFO     | did not find any defunct processes belonging to 2127958
[2025-10-12 23:19:54] 2025-10-13 03:19:21,157 | INFO     | ready for new job
[2025-10-12 23:19:54] 2025-10-13 03:19:21,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:19:54] 2025-10-13 03:19:21,165 | INFO     | ***************************************
[2025-10-12 23:19:54] 2025-10-13 03:19:21,165 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:19:54] 2025-10-13 03:19:21,165 | INFO     | ***************************************
[2025-10-12 23:19:54] 2025-10-13 03:19:21,165 | INFO     | 
[2025-10-12 23:19:54] 2025-10-13 03:19:21,176 | INFO     | architecture information:
[2025-10-12 23:19:54] 2025-10-13 03:19:21,178 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:19:54] 2025-10-13 03:19:21,257 | INFO     | cat /etc/os-release:
[2025-10-12 23:19:54] NAME="CentOS Linux"
[2025-10-12 23:19:54] VERSION="7 (Core)"
[2025-10-12 23:19:54] ID="centos"
[2025-10-12 23:19:54] ID_LIKE="rhel fedora"
[2025-10-12 23:19:54] VERSION_ID="7"
[2025-10-12 23:19:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:19:54] ANSI_COLOR="0;31"
[2025-10-12 23:19:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:19:54] HOME_URL="https://www.centos.org/"
[2025-10-12 23:19:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:19:54] 
[2025-10-12 23:19:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:19:54] 
[2025-10-12 23:19:54] 2025-10-13 03:19:21,258 | INFO     | ***************************************
[2025-10-12 23:19:54] 2025-10-13 03:19:21,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:19:54] 2025-10-13 03:19:21,916 | INFO     | sufficient remaining disk space (104907931648 B)
[2025-10-12 23:19:54] 2025-10-13 03:19:21,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:19:54] 2025-10-13 03:19:21,917 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:19:54] 2025-10-13 03:19:21,917 | INFO     | update_server=False
[2025-10-12 23:19:54] 2025-10-13 03:19:21,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:19:54] 2025-10-13 03:19:22,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:19:54] 2025-10-13 03:19:22,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:19:54] 2025-10-13 03:19:22,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:19:54] 2025-10-13 03:19:22,493 | INFO     | aborting loop
[2025-10-12 23:19:54] 2025-10-13 03:19:22,748 | INFO     | all job control threads have been joined
[2025-10-12 23:19:54] 2025-10-13 03:19:22,829 | INFO     | all payload control threads have been joined
[2025-10-12 23:19:54] 2025-10-13 03:19:22,861 | INFO     | all data control threads have been joined
[2025-10-12 23:19:54] 2025-10-13 03:19:22,925 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,001 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:19:54] 2025-10-13 03:19:23,123 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,126 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,167 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,174 | INFO     | [job] validate thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,506 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,703 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,754 | INFO     | [job] control thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,774 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,835 | INFO     | [payload] control thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:23,878 | INFO     | [data] control thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:24,036 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:24,148 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:26,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:19:54] 2025-10-13 03:19:38,073 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:19:54] 2025-10-13 03:19:38,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112035235648)>', '<ExcThread(monitor, started 140111027107584)>']
[2025-10-12 23:19:54] 2025-10-13 03:19:43,953 | INFO     | all workflow threads have been joined
[2025-10-12 23:19:54] 2025-10-13 03:19:43,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:19:54] 2025-10-13 03:19:43,954 | INFO     | traces error code: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:43,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:19:54] 2025-10-13 03:19:52,604 | INFO     | PID=2097757 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:19:54] 2025-10-13 03:19:52,610 | INFO     | .. there are 66 such processes running
[2025-10-12 23:19:54] 2025-10-13 03:19:52,610 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:19:54] 2025-10-13 03:19:52,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:19:54] 2025-10-13 03:19:52,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:19:54] 2025-10-13 03:19:52,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:19:54] 2025-10-13 03:19:52,611 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 23:19:54] 2025-10-13 03:19:52,611 | INFO     | [monitor] control thread has ended
[2025-10-12 23:19:54] 2025-10-13 03:19:53,093 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:19:54] 2025-10-13 03:19:53,109 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:19:54] 2025-10-13 03:19:53,133 [wrapper] pilotpid: 2097757
[2025-10-12 23:19:54] 2025-10-13 03:19:53,160 [wrapper] Pilot exit status: 0
[2025-10-12 23:19:54] 2025-10-13 03:19:53,334 [wrapper] pandaids: 6838853086 6838853086 6838853086
[2025-10-12 23:19:54] 2025-10-13 03:19:53,550 [wrapper] cleanup supervisor_pilot  284069 2097759
[2025-10-12 23:19:54] 2025-10-13 03:19:53,569 [wrapper] Test setup, not cleaning
[2025-10-12 23:19:54] 2025-10-13 03:19:53,609 [wrapper] apfmon messages muted
[2025-10-12 23:19:54] 2025-10-13 03:19:53,636 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:19:54] 2025-10-13 03:19:53,651 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:19:54]  *** Error codes and diagnostics ***
[2025-10-12 23:19:54]     "exeErrorCode": 0,
[2025-10-12 23:19:54]     "exeErrorDiag": "",
[2025-10-12 23:19:54]     "pilotErrorCode": 0,
[2025-10-12 23:19:54]     "pilotErrorDiag": "",
[2025-10-12 23:19:54]  *** Listing of results directory ***
[2025-10-12 23:19:54] total 633268
[2025-10-12 23:19:54] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 23:19:54] -rwx------. 1 boincer umatlas     36292 Oct 11 16:50 runpilot2-wrapper.sh
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:50 queuedata.json
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:19:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:12 run_atlas
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:12 job.xml
[2025-10-12 23:19:54] -rw-r--r--. 3 boincer umatlas 222335140 Oct 11 19:12 EVNT.46676267._002602.pool.root.1
[2025-10-12 23:19:54] -rw-r--r--. 3 boincer umatlas 222335140 Oct 11 19:12 ATLAS.root_0
[2025-10-12 23:19:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:12 start_atlas.sh
[2025-10-12 23:19:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:12 shared
[2025-10-12 23:19:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 19:12 input.tar.gz
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:12 boinc_lockfile
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:46 pandaJob.out
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas    975528 Oct 12 12:47 agis_schedconf.cvmfs.json
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 23:13 init_data.xml
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas 191552200 Oct 12 23:15 HITS.46676269._064722.pool.root.1
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas       532 Oct 12 23:15 boinc_task_state.xml
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas      1042 Oct 12 23:18 memory_monitor_summary.json
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas    684761 Oct 12 23:18 log.46676269._064722.job.log.tgz.1
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas        97 Oct 12 23:19 pilot_heartbeat.json
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas      7819 Oct 12 23:19 heartbeat.json
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas       893 Oct 12 23:19 pilotlog.txt
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:19 boinc_mmap_file
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas   3479594 Oct 12 23:19 log.46676269._064722.job.log.1
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas        29 Oct 12 23:19 wrapper_checkpoint.txt
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas       357 Oct 12 23:19 output.list
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:19 runtime_log
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas   4188160 Oct 12 23:19 result.tar.gz
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas      8774 Oct 12 23:19 runtime_log.err
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas       906 Oct 12 23:19 cbyMDmqivR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjahNDm3LBO4m.diag
[2025-10-12 23:19:54] -rw-r--r--. 1 boincer umatlas     25610 Oct 12 23:19 stderr.txt
[2025-10-12 23:19:54] HITS file was successfully produced:
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas 191552200 Oct 12 23:15 shared/HITS.pool.root.1
[2025-10-12 23:19:54]  *** Contents of shared directory: ***
[2025-10-12 23:19:54] total 408864
[2025-10-12 23:19:54] -rw-r--r--. 3 boincer umatlas 222335140 Oct 11 19:12 ATLAS.root_0
[2025-10-12 23:19:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:12 start_atlas.sh
[2025-10-12 23:19:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 19:12 input.tar.gz
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas 191552200 Oct 12 23:15 HITS.pool.root.1
[2025-10-12 23:19:54] -rw-------. 1 boincer umatlas   4188160 Oct 12 23:19 result.tar.gz
23:19:56 (2081615): run_atlas exited; CPU time 72152.304715
23:19:56 (2081615): called boinc_finish(0)

</stderr_txt>
]]>

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