Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:49 (24648): wrapper (7.7.26015): starting
19:02:49 (24648): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:02:49] Arguments: --nthreads 8
[2025-10-11 19:02:49] Threads: 8
[2025-10-11 19:02:49] Checking for CVMFS
[2025-10-11 19:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:02:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:02:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:02:49] 2.11.2.0 2790 184925 80828 151599 3 59 14151224 20275200 1 130560 1 64876602 99.977 6918021 23171 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:02:49] CVMFS is ok
[2025-10-11 19:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:02:49] Further information can be found at the LHC@home message board.
[2025-10-11 19:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:02:49] Checking for apptainer binary...
[2025-10-11 19:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:02:49] Running /usr/bin/apptainer --version
[2025-10-11 19:02:49] apptainer version 1.3.2-1.el7
[2025-10-11 19:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:02:51] c-204-4.aglt2.org
[2025-10-11 19:02:51] apptainer works
[2025-10-11 19:02:51] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:02:51] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:02:51] Starting ATLAS job with PandaID=6838853055
[2025-10-11 19:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:12:25 (4319): wrapper (7.7.26015): starting
21:12:25 (4319): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:12:25] Arguments: --nthreads 8
[2025-10-11 21:12:25] Threads: 8
[2025-10-11 21:12:25] This job has been restarted, cleaning up previous attempt
[2025-10-11 21:12:25] Checking for CVMFS
[2025-10-11 21:12:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:12:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:12:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:12:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:12:26] 2.11.2.0 2790 185054 82916 151601 2 39 14283028 20275200 1 130560 1 64954504 99.977 6923215 23168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:12:26] CVMFS is ok
[2025-10-11 21:12:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:12:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:12:26] Further information can be found at the LHC@home message board.
[2025-10-11 21:12:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:12:26] Checking for apptainer binary...
[2025-10-11 21:12:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:12:26] Running /usr/bin/apptainer --version
[2025-10-11 21:12:26] apptainer version 1.3.2-1.el7
[2025-10-11 21:12:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:12:28] c-204-4.aglt2.org
[2025-10-11 21:12:28] apptainer works
[2025-10-11 21:12:28] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:12:28] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:12:28] Starting ATLAS job with PandaID=6838853055
[2025-10-11 21:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:23:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:23:03] 2025-10-12 03:21:55,082 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:23:03] 2025-10-12 03:21:55,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:23:03] 2025-10-12 03:21:55,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:23:03] 2025-10-12 03:21:55,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:23:03] 2025-10-12 03:21:55,086 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:23:03] 2025-10-12 03:21:55,086 | INFO     | sum of square deviations: 635130048.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | sum of deviations: 9215010749.999994
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | mean x: 1760235439.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | mean y: 2470484.779527559
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | -- intersect: -25536532974.42378
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | intersect: -25536532974.42378
[2025-10-11 23:23:03] 2025-10-12 03:21:55,087 | INFO     | chi2: 2.4276299610466463
[2025-10-11 23:23:03] 2025-10-12 03:21:55,088 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 23:23:03] 2025-10-12 03:21:55,088 | INFO     | sum of deviations: 17298402814.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,088 | INFO     | mean x: 1760235286.5
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | mean y: 2487015.4590163934
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | -- intersect: -54078921296.29198
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | intersect: -54078921296.29198
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | chi2: 1.6589882449013484
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | current chi2=1.6589882449013484 (change=31.6622272948842 %)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,089 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,090 | INFO     | sum of deviations: 16803994581.000004
[2025-10-11 23:23:03] 2025-10-12 03:21:55,090 | INFO     | mean x: 1760235134.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,090 | INFO     | mean y: 2485879.8034188035
[2025-10-11 23:23:03] 2025-10-12 03:21:55,090 | INFO     | -- intersect: -59560839448.81696
[2025-10-11 23:23:03] 2025-10-12 03:21:55,090 | INFO     | intersect: -59560839448.81696
[2025-10-11 23:23:03] 2025-10-12 03:21:55,091 | INFO     | chi2: 1.660652882773671
[2025-10-11 23:23:03] 2025-10-12 03:21:55,091 | INFO     | current chi2=1.660652882773671 (change=-0.10034054656135401 %)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,091 | INFO     | right removable region: 116
[2025-10-11 23:23:03] 2025-10-12 03:21:55,091 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 23:23:03] 2025-10-12 03:21:55,092 | INFO     | sum of deviations: -12704255676.500008
[2025-10-11 23:23:03] 2025-10-12 03:21:55,092 | INFO     | mean x: 1760235591.5
[2025-10-11 23:23:03] 2025-10-12 03:21:55,092 | INFO     | mean y: 2516225.401639344
[2025-10-11 23:23:03] 2025-10-12 03:21:55,092 | INFO     | -- intersect: 39720874329.00529
[2025-10-11 23:23:03] 2025-10-12 03:21:55,092 | INFO     | intersect: 39720874329.00529
[2025-10-11 23:23:03] 2025-10-12 03:21:55,093 | INFO     | chi2: 0.8542160723230419
[2025-10-11 23:23:03] 2025-10-12 03:21:55,093 | INFO     | current chi2=0.8542160723230419 (change=64.81275622604544 %)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,093 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | sum of deviations: -15038287544.000002
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | mean x: 1760235744.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | mean y: 2521454.846153846
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | -- intersect: 53307152056.90236
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | intersect: 53307152056.90236
[2025-10-11 23:23:03] 2025-10-12 03:21:55,094 | INFO     | chi2: 0.8126165917684708
[2025-10-11 23:23:03] 2025-10-12 03:21:55,095 | INFO     | current chi2=0.8126165917684708 (change=4.869901410475833 %)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,095 | INFO     | left removable region: 20
[2025-10-11 23:23:03] 2025-10-12 03:21:55,095 | INFO     | sum of square deviations: 274312120.0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,095 | INFO     | sum of deviations: -5137012733.499999
[2025-10-11 23:23:03] 2025-10-12 03:21:55,095 | INFO     | mean x: 1760235713.5
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | mean y: 2540221.0520833335
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | -- intersect: 32966279753.27164
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | intersect: 32966279753.27164
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | chi2: 0.010122438567190447
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | -- intersect: 32966279753.27164
[2025-10-11 23:23:03] 2025-10-12 03:21:55,096 | INFO     | current memory leak: -18.73 B/s (using 96 data points, chi2=0.01)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | ..............................
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | . Timing measurements:
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | . get job = 0 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | . initial setup = 1 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | . payload setup = 8 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,097 | INFO     | . stage-in = 0 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,098 | INFO     | . payload execution = 7707 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,098 | INFO     | . stage-out = 2 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,098 | INFO     | . log creation = 0 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,098 | INFO     | ..............................
[2025-10-11 23:23:03] 2025-10-12 03:21:55,188 | INFO     | 
[2025-10-11 23:23:03] 2025-10-12 03:21:55,188 | INFO     | job summary report
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | --------------------------------------------------
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | PanDA job id: 6838853055
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | task id: 46676269
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | errors: (none)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:23:03] 2025-10-12 03:21:55,189 | INFO     | pilot state: finished 
[2025-10-11 23:23:03] 2025-10-12 03:21:55,190 | INFO     | transexitcode: 0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,190 | INFO     | exeerrorcode: 0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,190 | INFO     | exeerrordiag: 
[2025-10-11 23:23:03] 2025-10-12 03:21:55,190 | INFO     | exitcode: 0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | exitmsg: OK
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | cpuconsumptiontime: 57499 s
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | nevents: 400
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | neventsw: 0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | pid: 15339
[2025-10-11 23:23:03] 2025-10-12 03:21:55,191 | INFO     | pgrp: 15339
[2025-10-11 23:23:03] 2025-10-12 03:21:55,192 | INFO     | corecount: 8
[2025-10-11 23:23:03] 2025-10-12 03:21:55,192 | INFO     | event service: False
[2025-10-11 23:23:03] 2025-10-12 03:21:55,192 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7720: 2376780, 7723: 2385778, 7725: 2385962, 7733: 2386156}
[2025-10-11 23:23:03] 2025-10-12 03:21:55,192 | INFO     | --------------------------------------------------
[2025-10-11 23:23:03] 2025-10-12 03:21:55,192 | INFO     | 
[2025-10-11 23:23:03] 2025-10-12 03:21:55,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:23:03] 2025-10-12 03:21:55,224 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,228 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:23:03] 2025-10-12 03:21:55,228 | INFO     | job 6838853055 has completed (purged errors)
[2025-10-11 23:23:03] 2025-10-12 03:21:55,228 | INFO     | overall cleanup function is called
[2025-10-11 23:23:03] 2025-10-12 03:21:56,237 | INFO     | --- collectZombieJob: --- 10, [15339]
[2025-10-11 23:23:03] 2025-10-12 03:21:56,237 | INFO     | zombie collector waiting for pid 15339
[2025-10-11 23:23:03] 2025-10-12 03:21:56,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:23:03] 2025-10-12 03:21:56,238 | INFO     | collected zombie processes
[2025-10-11 23:23:03] 2025-10-12 03:21:56,238 | INFO     | will attempt to kill all subprocesses of pid=15339
[2025-10-11 23:23:03] 2025-10-12 03:21:56,327 | INFO     | process IDs to be killed: [15339] (in reverse order)
[2025-10-11 23:23:03] 2025-10-12 03:21:56,379 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:23:03] 2025-10-12 03:21:56,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:23:03] 2025-10-12 03:21:56,384 | INFO     | did not find any defunct processes belonging to 15339
[2025-10-11 23:23:03] 2025-10-12 03:21:56,388 | INFO     | did not find any defunct processes belonging to 15339
[2025-10-11 23:23:03] 2025-10-12 03:21:56,388 | INFO     | ready for new job
[2025-10-11 23:23:03] 2025-10-12 03:21:56,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:23:03] 2025-10-12 03:21:56,390 | INFO     | ***************************************
[2025-10-11 23:23:03] 2025-10-12 03:21:56,390 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:23:03] 2025-10-12 03:21:56,390 | INFO     | ***************************************
[2025-10-11 23:23:03] 2025-10-12 03:21:56,390 | INFO     | 
[2025-10-11 23:23:03] 2025-10-12 03:21:56,391 | INFO     | architecture information:
[2025-10-11 23:23:03] 2025-10-12 03:21:56,391 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:23:03] 2025-10-12 03:21:56,409 | INFO     | cat /etc/os-release:
[2025-10-11 23:23:03] NAME="CentOS Linux"
[2025-10-11 23:23:03] VERSION="7 (Core)"
[2025-10-11 23:23:03] ID="centos"
[2025-10-11 23:23:03] ID_LIKE="rhel fedora"
[2025-10-11 23:23:03] VERSION_ID="7"
[2025-10-11 23:23:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:23:03] ANSI_COLOR="0;31"
[2025-10-11 23:23:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:23:03] HOME_URL="https://www.centos.org/"
[2025-10-11 23:23:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:23:03] 
[2025-10-11 23:23:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:23:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:23:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:23:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:23:03] 
[2025-10-11 23:23:03] 2025-10-12 03:21:56,410 | INFO     | ***************************************
[2025-10-11 23:23:03] 2025-10-12 03:21:56,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:23:03] 2025-10-12 03:21:56,932 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-10-11 23:23:03] 2025-10-12 03:21:56,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:23:03] 2025-10-12 03:21:56,933 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:23:03] 2025-10-12 03:21:56,933 | INFO     | update_server=False
[2025-10-11 23:23:03] 2025-10-12 03:21:56,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:23:03] 2025-10-12 03:21:56,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:23:03] 2025-10-12 03:21:56,934 | INFO     | aborting loop
[2025-10-11 23:23:03] 2025-10-12 03:21:56,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:23:03] 2025-10-12 03:21:57,231 | INFO     | all job control threads have been joined
[2025-10-11 23:23:03] 2025-10-12 03:21:57,428 | INFO     | all data control threads have been joined
[2025-10-11 23:23:03] 2025-10-12 03:21:57,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:23:03] 2025-10-12 03:21:57,939 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:57,940 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:57,941 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:23:03] 2025-10-12 03:21:58,202 | INFO     | [job] validate thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,219 | INFO     | all payload control threads have been joined
[2025-10-11 23:23:03] 2025-10-12 03:21:58,232 | INFO     | [job] control thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,433 | INFO     | [data] control thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,592 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:58,701 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:59,030 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:59,145 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:59,219 | INFO     | [payload] control thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:59,377 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:21:59,442 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:22:00,137 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:22:01,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:23:03] 2025-10-12 03:22:27,980 | INFO     | PID=8032 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 23:23:03] 2025-10-12 03:22:27,980 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:23:03] 2025-10-12 03:22:27,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:23:03] 2025-10-12 03:22:27,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:23:03] 2025-10-12 03:22:56,996 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:23:03] 2025-10-12 03:22:57,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635661350720)>', '<ExcThread(monitor, started 139634940040960)>']
[2025-10-11 23:23:03] 2025-10-12 03:22:58,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:23:03] 2025-10-12 03:22:58,112 | INFO     | [monitor] control thread has ended
[2025-10-11 23:23:03] 2025-10-12 03:23:02,811 | INFO     | all workflow threads have been joined
[2025-10-11 23:23:03] 2025-10-12 03:23:02,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:23:03] 2025-10-12 03:23:02,812 | INFO     | traces error code: 0
[2025-10-11 23:23:03] 2025-10-12 03:23:02,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:23:03] 2025-10-12 03:23:02,920 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:23:03] 2025-10-12 03:23:02,925 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:23:03] 2025-10-12 03:23:02,929 [wrapper] pilotpid: 8032
[2025-10-11 23:23:03] 2025-10-12 03:23:02,934 [wrapper] Pilot exit status: 0
[2025-10-11 23:23:03] 2025-10-12 03:23:02,952 [wrapper] pandaids: 6838853055 6838853055
[2025-10-11 23:23:03] 2025-10-12 03:23:03,004 [wrapper] cleanup supervisor_pilot 31545 8033
[2025-10-11 23:23:03] 2025-10-12 03:23:03,009 [wrapper] Test setup, not cleaning
[2025-10-11 23:23:03] 2025-10-12 03:23:03,015 [wrapper] apfmon messages muted
[2025-10-11 23:23:03] 2025-10-12 03:23:03,019 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:23:03] 2025-10-12 03:23:03,024 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:23:03]  *** Error codes and diagnostics ***
[2025-10-11 23:23:03]     "exeErrorCode": 0,
[2025-10-11 23:23:03]     "exeErrorDiag": "",
[2025-10-11 23:23:03]     "pilotErrorCode": 0,
[2025-10-11 23:23:03]     "pilotErrorDiag": "",
[2025-10-11 23:23:03]  *** Listing of results directory ***
[2025-10-11 23:23:03] total 634992
[2025-10-11 23:23:03] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 16:48 queuedata.json
[2025-10-11 23:23:03] -rwx------ 1 boincer umatlas     36292 Oct 11 16:49 runpilot2-wrapper.sh
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas       100 Oct 11 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:23:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 19:02 run_atlas
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas       105 Oct 11 19:02 job.xml
[2025-10-11 23:23:03] -rw-r--r-- 3 boincer umatlas 223149116 Oct 11 19:02 EVNT.46676267._002601.pool.root.1
[2025-10-11 23:23:03] -rw-r--r-- 3 boincer umatlas 223149116 Oct 11 19:02 ATLAS.root_0
[2025-10-11 23:23:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:02 start_atlas.sh
[2025-10-11 23:23:03] drwxrwx--x 2 boincer umatlas      4096 Oct 11 19:02 shared
[2025-10-11 23:23:03] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 19:02 input.tar.gz
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas         0 Oct 11 19:02 boinc_lockfile
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 21:12 pandaJob.out
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas    975496 Oct 11 21:12 agis_schedconf.cvmfs.json
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 23:18 init_data.xml
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas 197123601 Oct 11 23:21 HITS.46676269._064691.pool.root.1
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas        96 Oct 11 23:21 pilot_heartbeat.json
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas      1049 Oct 11 23:21 memory_monitor_summary.json
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas       532 Oct 11 23:21 boinc_task_state.xml
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas   1560580 Oct 11 23:21 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas    364927 Oct 11 23:21 log.46676269._064691.job.log.tgz.1
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas      7848 Oct 11 23:21 heartbeat.json
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:22 boinc_mmap_file
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas        29 Oct 11 23:22 wrapper_checkpoint.txt
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas      4745 Oct 11 23:23 pilotlog.txt
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas   1089358 Oct 11 23:23 log.46676269._064691.job.log.1
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas       357 Oct 11 23:23 output.list
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:23 runtime_log
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas   1474560 Oct 11 23:23 result.tar.gz
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas      8783 Oct 11 23:23 runtime_log.err
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas       785 Oct 11 23:23 FvFMDmCivR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3ZSMDmSFkGXm.diag
[2025-10-11 23:23:03] -rw-r--r-- 1 boincer umatlas     23018 Oct 11 23:23 stderr.txt
[2025-10-11 23:23:03] HITS file was successfully produced:
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas 197123601 Oct 11 23:21 shared/HITS.pool.root.1
[2025-10-11 23:23:03]  *** Contents of shared directory: ***
[2025-10-11 23:23:03] total 412444
[2025-10-11 23:23:03] -rw-r--r-- 3 boincer umatlas 223149116 Oct 11 19:02 ATLAS.root_0
[2025-10-11 23:23:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 19:02 start_atlas.sh
[2025-10-11 23:23:03] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 19:02 input.tar.gz
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas 197123601 Oct 11 23:21 HITS.pool.root.1
[2025-10-11 23:23:03] -rw------- 1 boincer umatlas   1474560 Oct 11 23:23 result.tar.gz
23:23:05 (4319): run_atlas exited; CPU time 57430.549951
23:23:05 (4319): called boinc_finish(0)

</stderr_txt>
]]>

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