Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:17:20 (1213812): wrapper (7.7.26015): starting
19:17:20 (1213812): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 19:17:20] Arguments: --nthreads 9
[2025-10-11 19:17:20] Threads: 9
[2025-10-11 19:17:20] Checking for CVMFS
[2025-10-11 19:17:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:17:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:17:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:17:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:17:21] 2.13.2.0 2367554 128470 259164 151600 1 341 26185844 32935936 51111 16776704 0 490292642 99.660 447981250 18160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:17:21] CVMFS is ok
[2025-10-11 19:17:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:17:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:17:21] Further information can be found at the LHC@home message board.
[2025-10-11 19:17:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:17:21] Checking for apptainer binary...
[2025-10-11 19:17:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:17:21] Running /usr/bin/apptainer --version
[2025-10-11 19:17:21] apptainer version 1.4.3-1.el9
[2025-10-11 19:17:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:17:21] c7-2-15.aglt2.org
[2025-10-11 19:17:21] apptainer works
[2025-10-11 19:17:21] Set ATHENA_PROC_NUMBER=9
[2025-10-11 19:17:21] Set ATHENA_CORE_NUMBER=9
[2025-10-11 19:17:21] Starting ATLAS job with PandaID=6838912942
[2025-10-11 19:17:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:38:27]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:38:27] 2025-10-12 02:37:50,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,052 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 22:38:27] 2025-10-12 02:37:52,061 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3347.047166666667
[2025-10-11 22:38:27] 2025-10-12 02:37:52,181 | INFO     | PID=1217587 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:38:27] 2025-10-12 02:37:52,181 | INFO     | .. there are 64 such processes running
[2025-10-11 22:38:27] 2025-10-12 02:37:52,187 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838912942/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,188 | INFO     | extracted standard info from prmon json
[2025-10-11 22:38:27] 2025-10-12 02:37:52,188 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:38:27] 2025-10-12 02:37:52,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:38:27] 2025-10-12 02:37:52,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:38:27] 2025-10-12 02:37:52,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:38:27] 2025-10-12 02:37:52,193 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:38:27] 2025-10-12 02:37:52,194 | INFO     | sum of square deviations: 2334690034.673482
[2025-10-11 22:38:27] 2025-10-12 02:37:52,195 | INFO     | sum of deviations: 7566229651.09184
[2025-10-11 22:38:27] 2025-10-12 02:37:52,195 | INFO     | mean x: 1760230646.5408163
[2025-10-11 22:38:27] 2025-10-12 02:37:52,195 | INFO     | mean y: 2226569.301020408
[2025-10-11 22:38:27] 2025-10-12 02:37:52,195 | INFO     | -- intersect: -5702303416.616496
[2025-10-11 22:38:27] 2025-10-12 02:37:52,195 | INFO     | intersect: -5702303416.616496
[2025-10-11 22:38:27] 2025-10-12 02:37:52,196 | INFO     | chi2: 1.6444699106748575
[2025-10-11 22:38:27] 2025-10-12 02:37:52,196 | INFO     | sum of square deviations: 2160531069.664917
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | sum of deviations: 8614238339.36126
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | mean x: 1760230494.041885
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | mean y: 2227455.329842932
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | -- intersect: -7015975254.543752
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | intersect: -7015975254.543752
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | chi2: 1.6358008046634338
[2025-10-11 22:38:27] 2025-10-12 02:37:52,197 | INFO     | current chi2=1.6358008046634338 (change=0.527167201731654 %)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,202 | INFO     | right removable region: 190
[2025-10-11 22:38:27] 2025-10-12 02:37:52,202 | INFO     | sum of square deviations: 2160526189.664917
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | sum of deviations: -19043453935.52357
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | mean x: 1760230799.041885
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | mean y: 2249616.5654450264
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | -- intersect: 15517393241.20387
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | intersect: 15517393241.20387
[2025-10-11 22:38:27] 2025-10-12 02:37:52,203 | INFO     | chi2: 0.21708738509268224
[2025-10-11 22:38:27] 2025-10-12 02:37:52,204 | INFO     | current chi2=0.21708738509268224 (change=86.79894453018031 %)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,204 | INFO     | sum of square deviations: 1995246232.1559086
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | sum of deviations: -20281157105.39248
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | mean x: 1760230951.5430107
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | mean y: 2250694.7365591396
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | -- intersect: 17894538821.723354
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | intersect: 17894538821.723354
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | chi2: 0.16972781963507425
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | current chi2=0.16972781963507425 (change=21.815899361166718 %)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | left removable region: 20
[2025-10-11 22:38:27] 2025-10-12 02:37:52,205 | INFO     | sum of square deviations: 1523347060.1235297
[2025-10-11 22:38:27] 2025-10-12 02:37:52,207 | INFO     | sum of deviations: -9621024081.564716
[2025-10-11 22:38:27] 2025-10-12 02:37:52,207 | INFO     | mean x: 1760231073.5470588
[2025-10-11 22:38:27] 2025-10-12 02:37:52,207 | INFO     | mean y: 2242867.0705882353
[2025-10-11 22:38:27] 2025-10-12 02:37:52,207 | INFO     | -- intersect: 11119358586.151358
[2025-10-11 22:38:27] 2025-10-12 02:37:52,207 | INFO     | intersect: 11119358586.151358
[2025-10-11 22:38:27] 2025-10-12 02:37:52,208 | INFO     | chi2: 0.11430661732649329
[2025-10-11 22:38:27] 2025-10-12 02:37:52,208 | INFO     | -- intersect: 11119358586.151358
[2025-10-11 22:38:27] 2025-10-12 02:37:52,208 | INFO     | current memory leak: -6.32 B/s (using 170 data points, chi2=0.11)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,208 | INFO     | could have reported an average CPU frequency of 3341 MHz (10 samples)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,208 | INFO     | ..............................
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . Timing measurements:
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . get job = 0 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . initial setup = 3 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . payload setup = 9 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . stage-in = 0 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . payload execution = 11952 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . stage-out = 3 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | . log creation = 0 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,209 | INFO     | ..............................
[2025-10-11 22:38:27] 2025-10-12 02:37:52,282 | INFO     | 
[2025-10-11 22:38:27] 2025-10-12 02:37:52,282 | INFO     | job summary report
[2025-10-11 22:38:27] 2025-10-12 02:37:52,282 | INFO     | --------------------------------------------------
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | PanDA job id: 6838912942
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | task id: 46676269
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | errors: (none)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | pilot state: finished 
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | transexitcode: 0
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | exeerrorcode: 0
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | exeerrordiag: 
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | exitcode: 0
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | exitmsg: OK
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | cpuconsumptiontime: 31473 s
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | nevents: 400
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | neventsw: 0
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | pid: 1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | pgrp: 1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:52,283 | INFO     | corecount: 9
[2025-10-11 22:38:27] 2025-10-12 02:37:52,284 | INFO     | event service: False
[2025-10-11 22:38:27] 2025-10-12 02:37:52,284 | INFO     | sizes: {0: 2348636, 1: 2348835, 9: 2349097, 11: 2349125, 11966: 2378610, 11971: 2387608, 11974: 2387792, 11991: 2387986}
[2025-10-11 22:38:27] 2025-10-12 02:37:52,284 | INFO     | --------------------------------------------------
[2025-10-11 22:38:27] 2025-10-12 02:37:52,284 | INFO     | 
[2025-10-11 22:38:27] 2025-10-12 02:37:52,284 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 22:38:27] 2025-10-12 02:37:52,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | job 6838912942 has completed (purged errors)
[2025-10-11 22:38:27] 2025-10-12 02:37:52,428 | INFO     | overall cleanup function is called
[2025-10-11 22:38:27] 2025-10-12 02:37:53,444 | INFO     | --- collectZombieJob: --- 10, [1225204]
[2025-10-11 22:38:27] 2025-10-12 02:37:53,444 | INFO     | zombie collector waiting for pid 1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:53,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:38:27] 2025-10-12 02:37:53,444 | INFO     | collected zombie processes
[2025-10-11 22:38:27] 2025-10-12 02:37:53,444 | INFO     | will attempt to kill all subprocesses of pid=1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:54,544 | INFO     | process IDs to be killed: [1225204] (in reverse order)
[2025-10-11 22:38:27] 2025-10-12 02:37:55,362 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:38:27] 2025-10-12 02:37:55,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:38:27] 2025-10-12 02:37:55,442 | INFO     | did not find any defunct processes belonging to 1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:55,465 | INFO     | did not find any defunct processes belonging to 1225204
[2025-10-11 22:38:27] 2025-10-12 02:37:55,466 | INFO     | ready for new job
[2025-10-11 22:38:27] 2025-10-12 02:37:55,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:38:27] 2025-10-12 02:37:55,467 | INFO     | ***************************************
[2025-10-11 22:38:27] 2025-10-12 02:37:55,467 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:38:27] 2025-10-12 02:37:55,467 | INFO     | ***************************************
[2025-10-11 22:38:27] 2025-10-12 02:37:55,468 | INFO     | 
[2025-10-11 22:38:27] 2025-10-12 02:37:55,511 | INFO     | architecture information:
[2025-10-11 22:38:27] 2025-10-12 02:37:55,516 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:38:27] 2025-10-12 02:37:55,643 | INFO     | cat /etc/os-release:
[2025-10-11 22:38:27] NAME="CentOS Linux"
[2025-10-11 22:38:27] VERSION="7 (Core)"
[2025-10-11 22:38:27] ID="centos"
[2025-10-11 22:38:27] ID_LIKE="rhel fedora"
[2025-10-11 22:38:27] VERSION_ID="7"
[2025-10-11 22:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:38:27] ANSI_COLOR="0;31"
[2025-10-11 22:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:38:27] HOME_URL="https://www.centos.org/"
[2025-10-11 22:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:38:27] 
[2025-10-11 22:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:38:27] 
[2025-10-11 22:38:27] 2025-10-12 02:37:55,643 | INFO     | ***************************************
[2025-10-11 22:38:27] 2025-10-12 02:37:56,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 22:38:27] 2025-10-12 02:37:56,249 | INFO     | sufficient remaining disk space (74239180800 B)
[2025-10-11 22:38:27] 2025-10-12 02:37:56,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:38:27] 2025-10-12 02:37:56,250 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:38:27] 2025-10-12 02:37:56,250 | INFO     | update_server=False
[2025-10-11 22:38:27] 2025-10-12 02:37:56,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:38:27] 2025-10-12 02:37:56,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:38:27] 2025-10-12 02:37:56,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:38:27] 2025-10-12 02:37:56,442 | INFO     | aborting loop
[2025-10-11 22:38:27] 2025-10-12 02:37:56,465 | INFO     | all data control threads have been joined
[2025-10-11 22:38:27] 2025-10-12 02:37:56,566 | INFO     | all job control threads have been joined
[2025-10-11 22:38:27] 2025-10-12 02:37:56,874 | INFO     | all payload control threads have been joined
[2025-10-11 22:38:27] 2025-10-12 02:37:57,274 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:38:27] 2025-10-12 02:37:57,419 | INFO     | [job] validate thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,456 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,471 | INFO     | [data] control thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,566 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,577 | INFO     | [job] control thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,691 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,764 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:57,881 | INFO     | [payload] control thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,061 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,062 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,288 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,324 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,428 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:58,457 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:37:59,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:38:27] 2025-10-12 02:38:02,226 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:38:27] 2025-10-12 02:38:03,417 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:38:27] 2025-10-12 02:38:04,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973780784960)>', '<ExcThread(monitor, started 139973437150976)>']
[2025-10-11 22:38:27] 2025-10-12 02:38:09,129 | INFO     | all workflow threads have been joined
[2025-10-11 22:38:27] 2025-10-12 02:38:09,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:38:27] 2025-10-12 02:38:09,129 | INFO     | traces error code: 0
[2025-10-11 22:38:27] 2025-10-12 02:38:09,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:38:27] 2025-10-12 02:38:25,224 | INFO     | PID=1217587 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:38:27] 2025-10-12 02:38:25,224 | INFO     | .. there are 64 such processes running
[2025-10-11 22:38:27] 2025-10-12 02:38:25,225 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:38:27] 2025-10-12 02:38:25,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:38:27] 2025-10-12 02:38:25,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:38:27] 2025-10-12 02:38:25,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:38:27] 2025-10-12 02:38:25,225 | INFO     | [monitor] control thread has ended
[2025-10-11 22:38:27] 2025-10-12 02:38:25,357 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:38:27] 2025-10-12 02:38:25,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:38:27] 2025-10-12 02:38:25,438 [wrapper] pilotpid: 1217587
[2025-10-11 22:38:27] 2025-10-12 02:38:25,492 [wrapper] Pilot exit status: 0
[2025-10-11 22:38:27] 2025-10-12 02:38:25,615 [wrapper] pandaids: 6838912942
[2025-10-11 22:38:27] 2025-10-12 02:38:26,086 [wrapper] cleanup supervisor_pilot 2375339 1217588
[2025-10-11 22:38:27] 2025-10-12 02:38:26,116 [wrapper] Test setup, not cleaning
[2025-10-11 22:38:27] 2025-10-12 02:38:26,197 [wrapper] apfmon messages muted
[2025-10-11 22:38:27] 2025-10-12 02:38:26,227 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:38:27] 2025-10-12 02:38:26,266 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:38:27]  *** Error codes and diagnostics ***
[2025-10-11 22:38:27]     "exeErrorCode": 0,
[2025-10-11 22:38:27]     "exeErrorDiag": "",
[2025-10-11 22:38:27]     "pilotErrorCode": 0,
[2025-10-11 22:38:27]     "pilotErrorDiag": "",
[2025-10-11 22:38:27]  *** Listing of results directory ***
[2025-10-11 22:38:27] total 410404
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:47 queuedata.json
[2025-10-11 22:38:27] -rwx------. 1 boincer umatlas     36292 Oct 11 16:47 runpilot2-wrapper.sh
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:38:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:17 run_atlas
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:17 job.xml
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas 219667851 Oct 11 19:17 EVNT.46676267._001188.pool.root.1
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:17 start_atlas.sh
[2025-10-11 22:38:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:17 shared
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 19:17 input.tar.gz
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:17 boinc_lockfile
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:17 pandaJob.out
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas    975528 Oct 11 19:17 agis_schedconf.cvmfs.json
[2025-10-11 22:38:27] drwx------. 5 boincer umatlas      4096 Oct 11 19:17 pilot3
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas      6937 Oct 11 22:31 init_data.xml
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas 192754103 Oct 11 22:36 HITS.46676269._064772.pool.root.1
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas       530 Oct 11 22:36 boinc_task_state.xml
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas      1037 Oct 11 22:37 memory_monitor_summary.json
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas    445657 Oct 11 22:37 log.46676269._064772.job.log.tgz.1
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas      7781 Oct 11 22:37 heartbeat.json
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:38 boinc_mmap_file
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas        28 Oct 11 22:38 wrapper_checkpoint.txt
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas       823 Oct 11 22:38 pilotlog.txt
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas        95 Oct 11 22:38 pilot_heartbeat.json
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas   1519175 Oct 11 22:38 log.46676269._064772.job.log.1
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas       357 Oct 11 22:38 output.list
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:38 runtime_log
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas   1986560 Oct 11 22:38 result.tar.gz
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 22:38 runtime_log.err
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas       658 Oct 11 22:38 lG8NDmEgvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKahNDmnN98wn.diag
[2025-10-11 22:38:27] -rw-r--r--. 1 boincer umatlas     21294 Oct 11 22:38 stderr.txt
[2025-10-11 22:38:27] HITS file was successfully produced:
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas 192754103 Oct 11 22:36 shared/HITS.pool.root.1
[2025-10-11 22:38:27]  *** Contents of shared directory: ***
[2025-10-11 22:38:27] total 405284
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas 219667851 Oct 11 19:17 ATLAS.root_0
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:17 start_atlas.sh
[2025-10-11 22:38:27] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 19:17 input.tar.gz
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas 192754103 Oct 11 22:36 HITS.pool.root.1
[2025-10-11 22:38:27] -rw-------. 1 boincer umatlas   1986560 Oct 11 22:38 result.tar.gz
22:38:28 (1213812): run_atlas exited; CPU time 32051.553826
22:38:28 (1213812): called boinc_finish(0)

</stderr_txt>
]]>

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