Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:18:57 (508724): wrapper (7.7.26015): starting
23:18:57 (508724): wrapper: running run_atlas (--nthreads 10)
[2025-10-11 23:18:57] Arguments: --nthreads 10
[2025-10-11 23:18:57] Threads: 10
[2025-10-11 23:18:57] Checking for CVMFS
[2025-10-11 23:18:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:18:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:18:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:19:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:19:00] 2.13.2.0 807844 128711 755924 151604 1 621 13979024 25181185 34778 16776704 0 103410244 99.569 110189968 26744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 23:19:00] CVMFS is ok
[2025-10-11 23:19:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:19:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:19:00] Further information can be found at the LHC@home message board.
[2025-10-11 23:19:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:19:00] Checking for apptainer binary...
[2025-10-11 23:19:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:19:00] Running /usr/bin/apptainer --version
[2025-10-11 23:19:00] apptainer version 1.4.3-1.el9
[2025-10-11 23:19:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:19:01] c-16-38.aglt2.org
[2025-10-11 23:19:01] apptainer works
[2025-10-11 23:19:21] Set ATHENA_PROC_NUMBER=10
[2025-10-11 23:19:21] Set ATHENA_CORE_NUMBER=10
[2025-10-11 23:19:22] Starting ATLAS job with PandaID=6838853051
[2025-10-11 23:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:02:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:02:21] 2025-10-12 10:24:07,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,412 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 09:02:21] 2025-10-12 10:24:07,464 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2803.0657916666664
[2025-10-12 09:02:21] 2025-10-12 10:24:07,509 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838853051/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,510 | INFO     | extracted standard info from prmon json
[2025-10-12 09:02:21] 2025-10-12 10:24:07,510 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:02:21] 2025-10-12 10:24:07,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:02:21] 2025-10-12 10:24:07,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:02:21] 2025-10-12 10:24:07,513 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:02:21] 2025-10-12 10:24:07,560 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:02:21] 2025-10-12 10:24:07,561 | INFO     | sum of square deviations: 22002415021.200405
[2025-10-12 09:02:21] 2025-10-12 10:24:07,575 | INFO     | sum of deviations: 66342472805.05548
[2025-10-12 09:02:21] 2025-10-12 10:24:07,575 | INFO     | mean x: 1760251971.1183574
[2025-10-12 09:02:21] 2025-10-12 10:24:07,576 | INFO     | mean y: 2156298.611111111
[2025-10-12 09:02:21] 2025-10-12 10:24:07,576 | INFO     | -- intersect: -5305418729.468407
[2025-10-12 09:02:21] 2025-10-12 10:24:07,576 | INFO     | intersect: -5305418729.468407
[2025-10-12 09:02:21] 2025-10-12 10:24:07,577 | INFO     | chi2: 3.920071250624999
[2025-10-12 09:02:21] 2025-10-12 10:24:07,581 | INFO     | sum of square deviations: 21214802320.498848
[2025-10-12 09:02:21] 2025-10-12 10:24:07,586 | INFO     | sum of deviations: 87479658654.21518
[2025-10-12 09:02:21] 2025-10-12 10:24:07,587 | INFO     | mean x: 1760251818.618582
[2025-10-12 09:02:21] 2025-10-12 10:24:07,587 | INFO     | mean y: 2160348.129584352
[2025-10-12 09:02:21] 2025-10-12 10:24:07,600 | INFO     | -- intersect: -7256272981.198473
[2025-10-12 09:02:21] 2025-10-12 10:24:07,600 | INFO     | intersect: -7256272981.198473
[2025-10-12 09:02:21] 2025-10-12 10:24:07,601 | INFO     | chi2: 3.255933185219212
[2025-10-12 09:02:21] 2025-10-12 10:24:07,601 | INFO     | current chi2=3.255933185219212 (change=16.941989646231548 %)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,601 | INFO     | right removable region: 408
[2025-10-12 09:02:21] 2025-10-12 10:24:07,602 | INFO     | sum of square deviations: 21214621024.718826
[2025-10-12 09:02:21] 2025-10-12 10:24:07,612 | INFO     | sum of deviations: -13616167819.396088
[2025-10-12 09:02:21] 2025-10-12 10:24:07,612 | INFO     | mean x: 1760252123.635697
[2025-10-12 09:02:21] 2025-10-12 10:24:07,612 | INFO     | mean y: 2171734.5476772618
[2025-10-12 09:02:21] 2025-10-12 10:24:07,612 | INFO     | -- intersect: 1131953326.7781076
[2025-10-12 09:02:21] 2025-10-12 10:24:07,613 | INFO     | intersect: 1131953326.7781076
[2025-10-12 09:02:21] 2025-10-12 10:24:07,613 | INFO     | chi2: 1.8086564448285345
[2025-10-12 09:02:21] 2025-10-12 10:24:07,613 | INFO     | current chi2=1.8086564448285345 (change=53.86164359792771 %)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,614 | INFO     | sum of square deviations: 20445875347.78961
[2025-10-12 09:02:21] 2025-10-12 10:24:07,623 | INFO     | sum of deviations: -43061529925.17322
[2025-10-12 09:02:21] 2025-10-12 10:24:07,634 | INFO     | mean x: 1760252276.15099
[2025-10-12 09:02:21] 2025-10-12 10:24:07,634 | INFO     | mean y: 2177573.1831683167
[2025-10-12 09:02:21] 2025-10-12 10:24:07,635 | INFO     | -- intersect: 3709485515.541563
[2025-10-12 09:02:21] 2025-10-12 10:24:07,635 | INFO     | intersect: 3709485515.541563
[2025-10-12 09:02:21] 2025-10-12 10:24:07,635 | INFO     | chi2: 1.5474808419789539
[2025-10-12 09:02:21] 2025-10-12 10:24:07,636 | INFO     | current chi2=1.5474808419789539 (change=14.440310297533637 %)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,636 | INFO     | left removable region: 20
[2025-10-12 09:02:21] 2025-10-12 10:24:07,636 | INFO     | sum of square deviations: 18111231532.08263
[2025-10-12 09:02:21] 2025-10-12 10:24:07,642 | INFO     | sum of deviations: -33286671894.546394
[2025-10-12 09:02:21] 2025-10-12 10:24:07,642 | INFO     | mean x: 1760252398.1752577
[2025-10-12 09:02:21] 2025-10-12 10:24:07,642 | INFO     | mean y: 2184492.963917526
[2025-10-12 09:02:21] 2025-10-12 10:24:07,642 | INFO     | -- intersect: 3237356210.903442
[2025-10-12 09:02:21] 2025-10-12 10:24:07,642 | INFO     | intersect: 3237356210.903442
[2025-10-12 09:02:21] 2025-10-12 10:24:07,647 | INFO     | chi2: 0.8199243114640915
[2025-10-12 09:02:21] 2025-10-12 10:24:07,647 | INFO     | -- intersect: 3237356210.903442
[2025-10-12 09:02:21] 2025-10-12 10:24:07,648 | INFO     | current memory leak: -1.84 B/s (using 388 data points, chi2=0.82)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,648 | INFO     | could have reported an average CPU frequency of 2802 MHz (17 samples)
[2025-10-12 09:02:21] 2025-10-12 10:24:07,649 | INFO     | ..............................
[2025-10-12 09:02:21] 2025-10-12 10:24:07,649 | INFO     | . Timing measurements:
[2025-10-12 09:02:21] 2025-10-12 10:24:07,649 | INFO     | . get job = 0 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,653 | INFO     | . initial setup = 4 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,653 | INFO     | . payload setup = 47 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,653 | INFO     | . stage-in = 0 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,654 | INFO     | . payload execution = 25224 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,654 | INFO     | . stage-out = 13 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,654 | INFO     | . log creation = 0 s
[2025-10-12 09:02:21] 2025-10-12 10:24:07,654 | INFO     | ..............................
[2025-10-12 09:02:21] 2025-10-12 10:24:08,926 | INFO     | 
[2025-10-12 09:02:21] 2025-10-12 10:24:08,937 | INFO     | job summary report
[2025-10-12 09:02:21] 2025-10-12 10:24:08,937 | INFO     | --------------------------------------------------
[2025-10-12 09:02:21] 2025-10-12 10:24:08,937 | INFO     | PanDA job id: 6838853051
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | task id: 46676269
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | errors: (none)
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | pilot state: finished 
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | transexitcode: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | exeerrorcode: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | exeerrordiag: 
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | exitcode: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | exitmsg: OK
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | cpuconsumptiontime: 49745 s
[2025-10-12 09:02:21] 2025-10-12 10:24:08,938 | INFO     | nevents: 400
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | neventsw: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | pid: 535529
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | pgrp: 535529
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | corecount: 10
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | event service: False
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348913, 14: 2348941, 26: 2348969, 36: 2349125, 43: 2349415, 49: 2349443, 25277: 2384044, 25279: 2384043, 25295: 239
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | --------------------------------------------------
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | 
[2025-10-12 09:02:21] 2025-10-12 10:24:08,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:02:21] 2025-10-12 10:24:09,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:02:21] 2025-10-12 10:24:09,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:02:21] 2025-10-12 10:24:09,258 | INFO     | job 6838853051 has completed (purged errors)
[2025-10-12 09:02:21] 2025-10-12 10:24:09,259 | INFO     | overall cleanup function is called
[2025-10-12 09:02:21] 2025-10-12 10:24:09,490 | INFO     | PID=526512 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:02:21] 2025-10-12 10:24:09,490 | INFO     | .. there are 48 such processes running
[2025-10-12 09:02:21] 2025-10-12 10:24:10,267 | INFO     | --- collectZombieJob: --- 10, [535529]
[2025-10-12 09:02:21] 2025-10-12 10:24:10,267 | INFO     | zombie collector waiting for pid 535529
[2025-10-12 09:02:21] 2025-10-12 10:24:10,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:02:21] 2025-10-12 10:24:10,268 | INFO     | collected zombie processes
[2025-10-12 09:02:21] 2025-10-12 10:24:10,268 | INFO     | will attempt to kill all subprocesses of pid=535529
[2025-10-12 09:02:21] 2025-10-12 10:24:15,656 | INFO     | process IDs to be killed: [535529] (in reverse order)
[2025-10-12 09:02:21] 2025-10-12 10:24:17,013 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:02:21] 2025-10-12 10:24:17,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:02:21] 2025-10-12 10:24:17,035 | INFO     | did not find any defunct processes belonging to 535529
[2025-10-12 09:02:21] 2025-10-12 10:24:17,055 | INFO     | did not find any defunct processes belonging to 535529
[2025-10-12 09:02:21] 2025-10-12 10:24:17,056 | INFO     | ready for new job
[2025-10-12 09:02:21] 2025-10-12 10:24:17,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:02:21] 2025-10-12 10:24:17,059 | INFO     | ***************************************
[2025-10-12 09:02:21] 2025-10-12 10:24:17,059 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:02:21] 2025-10-12 10:24:17,059 | INFO     | ***************************************
[2025-10-12 09:02:21] 2025-10-12 10:24:17,060 | INFO     | 
[2025-10-12 09:02:21] 2025-10-12 10:24:17,075 | INFO     | architecture information:
[2025-10-12 09:02:21] 2025-10-12 10:24:17,087 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:02:21] 2025-10-12 10:24:17,341 | INFO     | cat /etc/os-release:
[2025-10-12 09:02:21] NAME="CentOS Linux"
[2025-10-12 09:02:21] VERSION="7 (Core)"
[2025-10-12 09:02:21] ID="centos"
[2025-10-12 09:02:21] ID_LIKE="rhel fedora"
[2025-10-12 09:02:21] VERSION_ID="7"
[2025-10-12 09:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:02:21] ANSI_COLOR="0;31"
[2025-10-12 09:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:02:21] HOME_URL="https://www.centos.org/"
[2025-10-12 09:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:02:21] 
[2025-10-12 09:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:02:21] 
[2025-10-12 09:02:21] 2025-10-12 10:24:17,342 | INFO     | ***************************************
[2025-10-12 09:02:21] 2025-10-12 10:24:17,845 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:02:21] 2025-10-12 10:24:17,974 | INFO     | sufficient remaining disk space (62344134656 B)
[2025-10-12 09:02:21] 2025-10-12 10:24:17,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:02:21] 2025-10-12 10:24:17,975 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:02:21] 2025-10-12 10:24:17,975 | INFO     | update_server=False
[2025-10-12 09:02:21] 2025-10-12 10:24:17,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:02:21] 2025-10-12 10:24:18,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:21] 2025-10-12 10:24:18,514 | INFO     | all job control threads have been joined
[2025-10-12 09:02:21] 2025-10-12 10:24:18,518 | INFO     | all payload control threads have been joined
[2025-10-12 09:02:21] 2025-10-12 10:24:18,712 | INFO     | all data control threads have been joined
[2025-10-12 09:02:21] 2025-10-12 10:24:18,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:21] 2025-10-12 10:24:18,827 | INFO     | aborting loop
[2025-10-12 09:02:21] 2025-10-12 10:24:18,981 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,013 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,167 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,339 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,342 | INFO     | [job] validate thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,526 | INFO     | [job] control thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,526 | INFO     | [payload] control thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:02:21] 2025-10-12 10:24:19,717 | INFO     | [data] control thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,833 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:19,958 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:20,262 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:20,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:20,316 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:20,479 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:20,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:02:21] 2025-10-12 10:24:21,550 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:21,958 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:02:21] 2025-10-12 10:24:24,620 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:02:21] 2025-10-12 10:24:26,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415790901056)>', '<ExcThread(monitor, started 140415510480640)>']
[2025-10-12 09:02:21] 2025-10-12 10:24:31,769 | INFO     | all workflow threads have been joined
[2025-10-12 09:02:21] 2025-10-12 10:24:31,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:02:21] 2025-10-12 10:24:31,770 | INFO     | traces error code: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:31,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:02:21] 2025-10-12 10:24:43,982 | INFO     | PID=526512 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:02:21] 2025-10-12 10:24:43,983 | INFO     | .. there are 48 such processes running
[2025-10-12 09:02:21] 2025-10-12 10:24:43,991 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:02:21] 2025-10-12 10:24:43,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:02:21] 2025-10-12 10:24:43,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:02:21] 2025-10-12 10:24:43,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:02:21] 2025-10-12 10:24:43,992 | INFO     | [monitor] control thread has ended
[2025-10-12 09:02:21] 2025-10-12 10:24:44,563 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:02:21] 2025-10-12 10:24:44,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:02:21] 2025-10-12 10:24:44,639 [wrapper] pilotpid: 526512
[2025-10-12 09:02:21] 2025-10-12 10:24:44,664 [wrapper] Pilot exit status: 0
[2025-10-12 09:02:21] 2025-10-12 10:24:45,215 [wrapper] pandaids: 6838853051
[2025-10-12 09:02:21] 2025-10-12 10:24:45,345 [wrapper] cleanup supervisor_pilot 2012891 526513
[2025-10-12 09:02:21] 2025-10-12 10:24:45,383 [wrapper] Test setup, not cleaning
[2025-10-12 09:02:21] 2025-10-12 10:24:45,397 [wrapper] apfmon messages muted
[2025-10-12 09:02:21] 2025-10-12 10:24:45,424 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:02:21] 2025-10-12 10:24:45,446 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:02:21]  *** Error codes and diagnostics ***
[2025-10-12 09:02:21]     "exeErrorCode": 0,
[2025-10-12 09:02:21]     "exeErrorDiag": "",
[2025-10-12 09:02:21]     "pilotErrorCode": 0,
[2025-10-12 09:02:21]     "pilotErrorDiag": "",
[2025-10-12 09:02:21]  *** Listing of results directory ***
[2025-10-12 09:02:21] total 415916
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:45 queuedata.json
[2025-10-12 09:02:21] -rwx------. 1 boincer umatlas     36292 Oct 11 16:46 runpilot2-wrapper.sh
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:02:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:18 run_atlas
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:18 job.xml
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas 223149116 Oct 11 23:18 EVNT.46676267._002601.pool.root.1
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:18 start_atlas.sh
[2025-10-12 09:02:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:18 shared
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 23:18 input.tar.gz
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:18 boinc_lockfile
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 23:19 pandaJob.out
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas    975496 Oct 11 23:20 agis_schedconf.cvmfs.json
[2025-10-12 09:02:21] drwx------. 5 boincer umatlas      4096 Oct 11 23:20 pilot3
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas 192588526 Oct 12 06:22 HITS.46676269._064687.pool.root.1
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas       530 Oct 12 06:22 boinc_task_state.xml
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas      1041 Oct 12 06:23 memory_monitor_summary.json
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas    577464 Oct 12 06:23 log.46676269._064687.job.log.tgz.1
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas        95 Oct 12 06:24 pilot_heartbeat.json
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas      7825 Oct 12 06:24 heartbeat.json
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas       822 Oct 12 06:24 pilotlog.txt
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas   2553716 Oct 12 06:24 log.46676269._064687.job.log.1
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas       357 Oct 12 06:24 output.list
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:24 runtime_log
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas   3153920 Oct 12 06:24 result.tar.gz
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 06:24 runtime_log.err
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas       656 Oct 12 06:24 iBEODmFfvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWZSMDmqOWTlm.diag
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 09:02 init_data.xml
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas        27 Oct 12 09:02 wrapper_checkpoint.txt
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:02 boinc_mmap_file
[2025-10-12 09:02:21] -rw-r--r--. 1 boincer umatlas     21325 Oct 12 09:02 stderr.txt
[2025-10-12 09:02:21] HITS file was successfully produced:
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas 192588526 Oct 12 06:22 shared/HITS.pool.root.1
[2025-10-12 09:02:21]  *** Contents of shared directory: ***
[2025-10-12 09:02:21] total 409656
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas 223149116 Oct 11 23:18 ATLAS.root_0
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:18 start_atlas.sh
[2025-10-12 09:02:21] -rw-r--r--. 2 boincer umatlas    569686 Oct 11 23:18 input.tar.gz
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas 192588526 Oct 12 06:22 HITS.pool.root.1
[2025-10-12 09:02:21] -rw-------. 1 boincer umatlas   3153920 Oct 12 06:24 result.tar.gz
09:02:23 (508724): run_atlas exited; CPU time 50789.767457
09:02:23 (508724): called boinc_finish(0)

</stderr_txt>
]]>

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