Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:09:31 (1552041): wrapper (7.7.26015): starting
16:09:31 (1552041): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 16:09:31] Arguments: --nthreads 4
[2025-10-11 16:09:31] Threads: 4
[2025-10-11 16:09:31] Checking for CVMFS
[2025-10-11 16:09:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:09:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:09:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:09:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:09:32] 2.13.2.0 1473443 93 46148 151599 2 57 3239585 4096001 0 130560 0 134173 99.986 5385 961 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 16:09:32] CVMFS is ok
[2025-10-11 16:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:09:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 16:09:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 16:09:32] Further information can be found at the LHC@home message board.
[2025-10-11 16:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:09:32] Checking for apptainer binary...
[2025-10-11 16:09:32] apptainer is not installed, using version from CVMFS
[2025-10-11 16:09:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:09:32] WALKTOTHESUNMINT
[2025-10-11 16:09:32] apptainer works
[2025-10-11 16:09:32] Set ATHENA_PROC_NUMBER=4
[2025-10-11 16:09:32] Set ATHENA_CORE_NUMBER=4
[2025-10-11 16:09:32] Starting ATLAS job with PandaID=6838773011
[2025-10-11 16:09:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:26:59]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:26:59]  status=None
[2025-10-11 17:26:59]  status_code=0
[2025-10-11 17:26:59]  storage_token=
[2025-10-11 17:26:59]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6838773011/log.46676269._062442.job.log.tgz.1
[2025-10-11 17:26:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/f7/log.46676269._062442.job.log.tgz.1
[2025-10-11 17:26:59]  workdir=None
[2025-10-11 17:26:59] ]
[2025-10-11 17:26:59] 2025-10-12 00:25:48,120 | INFO     | transferring file log.46676269._062442.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6838773011/log.46676269._062442.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 17:26:59] 2025-10-12 00:25:48,120 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6838773011/log.46676269._062442.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._062442.job
[2025-10-11 17:26:59] 2025-10-12 00:25:48,130 | INFO     | adding to output.list: log.46676269._062442.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/f7/log.46676269._062442.job.log.tg
[2025-10-11 17:26:59] 2025-10-12 00:25:48,130 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 17:26:59] 2025-10-12 00:25:48,130 | INFO     | summary of transferred files:
[2025-10-11 17:26:59] 2025-10-12 00:25:48,130 | INFO     |  -- lfn=log.46676269._062442.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 17:26:59] 2025-10-12 00:25:48,130 | INFO     | stage-out finished correctly
[2025-10-11 17:26:59] 2025-10-12 00:25:48,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 17:26:59] 2025-10-12 00:25:48,714 | WARNING  | process 1562424 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 17:26:59] 2025-10-12 00:25:48,714 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6838773011/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:26:59] 2025-10-12 00:25:48,768 | INFO     | number of running child processes to parent process 1562424: 1
[2025-10-11 17:26:59] 2025-10-12 00:25:48,768 | INFO     | maximum number of monitored processes: 6
[2025-10-11 17:26:59] 2025-10-12 00:25:48,840 | INFO     | time since job start (4563s) is within the limit (172800.0s)
[2025-10-11 17:26:59] 2025-10-12 00:25:49,366 | INFO     | job 6838773011 has state=finished
[2025-10-11 17:26:59] 2025-10-12 00:25:49,367 | INFO     | preparing for final server update for job 6838773011 in state='finished'
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | this job has now completed (state=finished)
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | log transfer has been attempted: DONE
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | job 6838773011 has finished - writing final server update
[2025-10-11 17:26:59] 2025-10-12 00:25:49,703 | INFO     | total number of processed events: 400 (read)
[2025-10-11 17:26:59] 2025-10-12 00:25:49,704 | INFO     | executing command: lscpu
[2025-10-11 17:26:59] 2025-10-12 00:25:49,717 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 17:26:59] 2025-10-12 00:25:50,845 | INFO     | time since job start (4565s) is within the limit (172800.0s)
[2025-10-11 17:26:59] 2025-10-12 00:25:51,271 | INFO     | monitor loop #349: job 0:6838773011 is in state 'finished'
[2025-10-11 17:26:59] 2025-10-12 00:25:51,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,057 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:26:59] 2025-10-12 00:25:52,058 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4600.400124999999
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6838773011/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | INFO     | extracted standard info from prmon json
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:26:59] 2025-10-12 00:25:52,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | sum of square deviations: 97479037.0
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | sum of deviations: -2113203967.9999998
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | mean x: 1760226550.5
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | mean y: 2358968.7352941176
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | -- intersect: 38161514471.01576
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | intersect: 38161514471.01576
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | chi2: 0.05107917246127147
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | -- intersect: 38161514471.01576
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | current memory leak: -21.68 B/s (using 68 data points, chi2=0.05)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | could have reported an average CPU frequency of 4600 MHz (6 samples)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,061 | INFO     | ..............................
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . Timing measurements:
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . get job = 0 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . initial setup = 9 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . payload setup = 2 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . stage-in = 0 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . payload execution = 4544 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . stage-out = 0 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | . log creation = 0 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,062 | INFO     | ..............................
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | 
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | job summary report
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | --------------------------------------------------
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | PanDA job id: 6838773011
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | task id: 46676269
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | errors: (none)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | pilot state: finished 
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | transexitcode: 0
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | exeerrorcode: 0
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | exeerrordiag: 
[2025-10-11 17:26:59] 2025-10-12 00:25:52,092 | INFO     | exitcode: 0
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | exitmsg: OK
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | cpuconsumptiontime: 17599 s
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | nevents: 400
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | neventsw: 0
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | pid: 1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | pgrp: 1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | corecount: 4
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | event service: False
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4550: 2384397, 4551: 2384397, 4554: 2384591}
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | --------------------------------------------------
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | 
[2025-10-11 17:26:59] 2025-10-12 00:25:52,093 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-11 17:26:59] 2025-10-12 00:25:52,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:26:59] 2025-10-12 00:25:52,104 | INFO     | job 6838773011 has completed (purged errors)
[2025-10-11 17:26:59] 2025-10-12 00:25:52,105 | INFO     | overall cleanup function is called
[2025-10-11 17:26:59] 2025-10-12 00:25:53,110 | INFO     | --- collectZombieJob: --- 10, [1562424]
[2025-10-11 17:26:59] 2025-10-12 00:25:53,110 | INFO     | zombie collector waiting for pid 1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:53,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:26:59] 2025-10-12 00:25:53,111 | INFO     | collected zombie processes
[2025-10-11 17:26:59] 2025-10-12 00:25:53,111 | INFO     | will attempt to kill all subprocesses of pid=1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:53,187 | INFO     | process IDs to be killed: [1562424] (in reverse order)
[2025-10-11 17:26:59] 2025-10-12 00:25:53,214 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:26:59] 2025-10-12 00:25:53,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:26:59] 2025-10-12 00:25:53,216 | INFO     | did not find any defunct processes belonging to 1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | did not find any defunct processes belonging to 1562424
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | ready for new job
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | ***************************************
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | ***************************************
[2025-10-11 17:26:59] 2025-10-12 00:25:53,218 | INFO     | 
[2025-10-11 17:26:59] 2025-10-12 00:25:53,219 | INFO     | architecture information:
[2025-10-11 17:26:59] 2025-10-12 00:25:53,219 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:26:59] 2025-10-12 00:25:53,227 | INFO     | cat /etc/os-release:
[2025-10-11 17:26:59] NAME="CentOS Linux"
[2025-10-11 17:26:59] VERSION="7 (Core)"
[2025-10-11 17:26:59] ID="centos"
[2025-10-11 17:26:59] ID_LIKE="rhel fedora"
[2025-10-11 17:26:59] VERSION_ID="7"
[2025-10-11 17:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:26:59] ANSI_COLOR="0;31"
[2025-10-11 17:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:26:59] HOME_URL="https://www.centos.org/"
[2025-10-11 17:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:26:59] 
[2025-10-11 17:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:26:59] 
[2025-10-11 17:26:59] 2025-10-12 00:25:53,227 | INFO     | ***************************************
[2025-10-11 17:26:59] 2025-10-12 00:25:53,729 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | INFO     | sufficient remaining disk space (707183771648 B)
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | INFO     | update_server=False
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:26:59] 2025-10-12 00:25:53,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:26:59] 2025-10-12 00:25:53,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:26:59] 2025-10-12 00:25:53,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:26:59] 2025-10-12 00:25:53,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:26:59] 2025-10-12 00:25:53,774 | INFO     | will abort loop
[2025-10-11 17:26:59] 2025-10-12 00:25:54,006 | INFO     | all payload control threads have been joined
[2025-10-11 17:26:59] 2025-10-12 00:25:54,204 | INFO     | all data control threads have been joined
[2025-10-11 17:26:59] 2025-10-12 00:25:54,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:26:59] 2025-10-12 00:25:54,744 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:54,745 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:54,778 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:54,937 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,011 | INFO     | [payload] control thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,117 | INFO     | all job control threads have been joined
[2025-10-11 17:26:59] 2025-10-12 00:25:55,209 | INFO     | [data] control thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,745 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,863 | INFO     | [job] validate thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,941 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:55,969 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:56,008 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:56,043 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:56,122 | INFO     | [job] control thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:56,133 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:25:58,407 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:26:03,809 | INFO     | job.realtimelogging is not enabled
[2025-10-11 17:26:59] 2025-10-12 00:26:04,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:26:59] 2025-10-12 00:26:23,971 | INFO     | PID=1555811 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:26:59] 2025-10-12 00:26:23,971 | INFO     | .. there are 2 such processes running
[2025-10-11 17:26:59] 2025-10-12 00:26:23,971 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:26:59] 2025-10-12 00:26:23,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:26:59] 2025-10-12 00:26:23,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:26:59] 2025-10-12 00:26:52,330 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:26:59] 2025-10-12 00:26:54,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131214645856064)>', '<ExcThread(monitor, started 131214111393536)>']
[2025-10-11 17:26:59] 2025-10-12 00:26:55,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:26:59] 2025-10-12 00:26:55,125 | INFO     | [monitor] control thread has ended
[2025-10-11 17:26:59] 2025-10-12 00:26:59,359 | INFO     | all workflow threads have been joined
[2025-10-11 17:26:59] 2025-10-12 00:26:59,359 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:26:59] 2025-10-12 00:26:59,359 | INFO     | traces error code: 0
[2025-10-11 17:26:59] 2025-10-12 00:26:59,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:26:59] 2025-10-12 00:26:59,411 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:26:59] 2025-10-12 00:26:59,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:26:59] 2025-10-12 00:26:59,413 [wrapper] pilotpid: 1555811
[2025-10-11 17:26:59] 2025-10-12 00:26:59,414 [wrapper] Pilot exit status: 0
[2025-10-11 17:26:59] 2025-10-12 00:26:59,422 [wrapper] pandaids: 6838773011
[2025-10-11 17:26:59] 2025-10-12 00:26:59,436 [wrapper] cleanup supervisor_pilot 1620671 1555812
[2025-10-11 17:26:59] 2025-10-12 00:26:59,437 [wrapper] Test setup, not cleaning
[2025-10-11 17:26:59] 2025-10-12 00:26:59,438 [wrapper] apfmon messages muted
[2025-10-11 17:26:59] 2025-10-12 00:26:59,440 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:26:59] 2025-10-12 00:26:59,441 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:26:59]  *** Error codes and diagnostics ***
[2025-10-11 17:26:59]     "exeErrorCode": 0,
[2025-10-11 17:26:59]     "exeErrorDiag": "",
[2025-10-11 17:26:59]     "pilotErrorCode": 0,
[2025-10-11 17:26:59]     "pilotErrorDiag": "",
[2025-10-11 17:26:59]  *** Listing of results directory ***
[2025-10-11 17:26:59] total 410944
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc    557409 Oct 11 11:14 pilot3.tar.gz
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc      5112 Oct 11 11:19 queuedata.json
[2025-10-11 17:26:59] -rwx------ 1 boinc boinc     36292 Oct 11 11:20 runpilot2-wrapper.sh
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc       100 Oct 11 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:26:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 16:09 run_atlas
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc       105 Oct 11 16:09 job.xml
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc 219272662 Oct 11 16:09 EVNT.46676267._002508.pool.root.1
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc    569681 Oct 11 16:09 input.tar.gz
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc     15120 Oct 11 16:09 start_atlas.sh
[2025-10-11 17:26:59] drwxrwx--x 2 boinc boinc      4096 Oct 11 16:09 shared
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc         0 Oct 11 16:09 boinc_setup_complete
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc      9041 Oct 11 16:09 init_data.xml
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc         0 Oct 11 16:09 boinc_lockfile
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc      2550 Oct 11 16:09 pandaJob.out
[2025-10-11 17:26:59] -rw------- 1 boinc boinc    975520 Oct 11 16:09 agis_schedconf.cvmfs.json
[2025-10-11 17:26:59] -rw------- 1 boinc boinc   1560580 Oct 11 16:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:26:59] drwx------ 5 boinc boinc      4096 Oct 11 16:09 pilot3
[2025-10-11 17:26:59] -rw------- 1 boinc boinc 195732829 Oct 11 17:25 HITS.46676269._062442.pool.root.1
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc       529 Oct 11 17:25 boinc_task_state.xml
[2025-10-11 17:26:59] -rw------- 1 boinc boinc      1033 Oct 11 17:25 memory_monitor_summary.json
[2025-10-11 17:26:59] -rw------- 1 boinc boinc    270200 Oct 11 17:25 log.46676269._062442.job.log.tgz.1
[2025-10-11 17:26:59] -rw------- 1 boinc boinc      7815 Oct 11 17:25 heartbeat.json
[2025-10-11 17:26:59] -rw------- 1 boinc boinc        95 Oct 11 17:26 pilot_heartbeat.json
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc      8192 Oct 11 17:26 boinc_mmap_file
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc        27 Oct 11 17:26 wrapper_checkpoint.txt
[2025-10-11 17:26:59] -rw------- 1 boinc boinc      5082 Oct 11 17:26 pilotlog.txt
[2025-10-11 17:26:59] -rw------- 1 boinc boinc    678262 Oct 11 17:26 log.46676269._062442.job.log.1
[2025-10-11 17:26:59] -rw------- 1 boinc boinc       357 Oct 11 17:26 output.list
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc       620 Oct 11 17:26 runtime_log
[2025-10-11 17:26:59] -rw------- 1 boinc boinc    962560 Oct 11 17:26 result.tar.gz
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc      8693 Oct 11 17:26 runtime_log.err
[2025-10-11 17:26:59] -rw------- 1 boinc boinc       651 Oct 11 17:26 8gMNDmuNtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhChNDmRaMBFm.diag
[2025-10-11 17:26:59] -rw-r--r-- 1 boinc boinc     22038 Oct 11 17:26 stderr.txt
[2025-10-11 17:26:59] HITS file was successfully produced:
[2025-10-11 17:26:59] -rw------- 1 boinc boinc 195732829 Oct 11 17:25 shared/HITS.pool.root.1
[2025-10-11 17:26:59]  *** Contents of shared directory: ***
[2025-10-11 17:26:59] total 406808
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc 219272662 Oct 11 16:09 ATLAS.root_0
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc    569681 Oct 11 16:09 input.tar.gz
[2025-10-11 17:26:59] -rw-r--r-- 2 boinc boinc     15120 Oct 11 16:09 start_atlas.sh
[2025-10-11 17:26:59] -rw------- 1 boinc boinc 195732829 Oct 11 17:25 HITS.pool.root.1
[2025-10-11 17:26:59] -rw------- 1 boinc boinc    962560 Oct 11 17:26 result.tar.gz
17:27:00 (1552041): run_atlas exited; CPU time 17637.388569
17:27:00 (1552041): called boinc_finish(0)

</stderr_txt>
]]>

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