Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:23 (1792479): wrapper (7.7.26015): starting
09:24:23 (1792479): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 09:24:23] Arguments: --nthreads 3
[2025-10-12 09:24:23] Threads: 3
[2025-10-12 09:24:23] Checking for CVMFS
[2025-10-12 09:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:24:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:24:23] 2.9.2.0 570712 3973 83348 151612 3 57 30550262 36864000 0 130560 0 3221384 99.991 136054 882 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 09:24:23] CVMFS is ok
[2025-10-12 09:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:24:23] Further information can be found at the LHC@home message board.
[2025-10-12 09:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:24:23] Checking for apptainer binary...
[2025-10-12 09:24:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:24:23] Running /usr/bin/apptainer --version
[2025-10-12 09:24:23] apptainer version 1.4.1-1.1
[2025-10-12 09:24:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:24:23] magicA161a
[2025-10-12 09:24:23] apptainer works
[2025-10-12 09:24:23] Set ATHENA_PROC_NUMBER=3
[2025-10-12 09:24:23] Set ATHENA_CORE_NUMBER=3
[2025-10-12 09:24:23] Starting ATLAS job with PandaID=6838454858
[2025-10-12 09:24:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:48:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:48:50] 2025-10-12 08:48:19,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:48:50] 2025-10-12 08:48:19,306 | INFO     | did not find any defunct processes belonging to 1802667
[2025-10-12 10:48:50] 2025-10-12 08:48:19,307 | INFO     | did not find any defunct processes belonging to 1802667
[2025-10-12 10:48:50] 2025-10-12 08:48:19,307 | INFO     | ready for new job
[2025-10-12 10:48:50] 2025-10-12 08:48:19,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:48:50] 2025-10-12 08:48:19,308 | INFO     | ***************************************
[2025-10-12 10:48:50] 2025-10-12 08:48:19,308 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:48:50] 2025-10-12 08:48:19,308 | INFO     | ***************************************
[2025-10-12 10:48:50] 2025-10-12 08:48:19,308 | INFO     | 
[2025-10-12 10:48:50] 2025-10-12 08:48:19,308 | INFO     | architecture information:
[2025-10-12 10:48:50] 2025-10-12 08:48:19,309 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:48:50] 2025-10-12 08:48:19,317 | INFO     | cat /etc/os-release:
[2025-10-12 10:48:50] NAME="CentOS Linux"
[2025-10-12 10:48:50] VERSION="7 (Core)"
[2025-10-12 10:48:50] ID="centos"
[2025-10-12 10:48:50] ID_LIKE="rhel fedora"
[2025-10-12 10:48:50] VERSION_ID="7"
[2025-10-12 10:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:48:50] ANSI_COLOR="0;31"
[2025-10-12 10:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:48:50] HOME_URL="https://www.centos.org/"
[2025-10-12 10:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:48:50] 
[2025-10-12 10:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:48:50] 
[2025-10-12 10:48:50] 2025-10-12 08:48:19,317 | INFO     | ***************************************
[2025-10-12 10:48:50] 2025-10-12 08:48:19,820 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 10:48:50] 2025-10-12 08:48:19,833 | INFO     | sufficient remaining disk space (374102556672 B)
[2025-10-12 10:48:50] 2025-10-12 08:48:19,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:48:50] 2025-10-12 08:48:19,834 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:48:50] 2025-10-12 08:48:19,834 | INFO     | update_server=False
[2025-10-12 10:48:50] 2025-10-12 08:48:19,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:48:50] 2025-10-12 08:48:19,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:48:50] 2025-10-12 08:48:19,834 | INFO     | aborting loop
[2025-10-12 10:48:50] 2025-10-12 08:48:19,875 | INFO     | all data control threads have been joined
[2025-10-12 10:48:50] 2025-10-12 08:48:20,151 | INFO     | all payload control threads have been joined
[2025-10-12 10:48:50] 2025-10-12 08:48:20,839 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:20,840 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:20,842 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:20,851 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:20,881 | INFO     | [data] control thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:20,883 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:21,157 | INFO     | [payload] control thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:21,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:48:50] 2025-10-12 08:48:21,498 | INFO     | all job control threads have been joined
[2025-10-12 10:48:50] 2025-10-12 08:48:21,613 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:21,718 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:21,735 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:22,247 | INFO     | [job] validate thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:22,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:48:50] 2025-10-12 08:48:22,500 | INFO     | [job] control thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:22,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:48:50] 2025-10-12 08:48:23,218 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:23,797 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:26,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:30,682 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:48:50] 2025-10-12 08:48:31,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:48:50] 2025-10-12 08:48:35,464 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:48:50] 2025-10-12 08:48:36,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238250874688)>', '<ExcThread(monitor, started 140237896398592)>']
[2025-10-12 10:48:50] 2025-10-12 08:48:41,164 | INFO     | all workflow threads have been joined
[2025-10-12 10:48:50] 2025-10-12 08:48:41,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:48:50] 2025-10-12 08:48:41,164 | INFO     | traces error code: 0
[2025-10-12 10:48:50] 2025-10-12 08:48:41,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | INFO     | PID=1796225 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:48:50] 2025-10-12 08:48:50,789 | INFO     | [monitor] control thread has ended
[2025-10-12 10:48:50] 2025-10-12 08:48:50,835 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:48:50] 2025-10-12 08:48:50,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:48:50] 2025-10-12 08:48:50,839 [wrapper] pilotpid: 1796225
[2025-10-12 10:48:50] 2025-10-12 08:48:50,842 [wrapper] Pilot exit status: 0
[2025-10-12 10:48:50] 2025-10-12 08:48:50,849 [wrapper] pandaids: 6838454858
[2025-10-12 10:48:50] 2025-10-12 08:48:50,864 [wrapper] cleanup supervisor_pilot 1814672 1796226
[2025-10-12 10:48:50] 2025-10-12 08:48:50,867 [wrapper] Test setup, not cleaning
[2025-10-12 10:48:50] 2025-10-12 08:48:50,869 [wrapper] apfmon messages muted
[2025-10-12 10:48:50] 2025-10-12 08:48:50,871 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:48:50] 2025-10-12 08:48:50,873 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:48:50]  *** Error codes and diagnostics ***
[2025-10-12 10:48:50]     "exeErrorCode": 0,
[2025-10-12 10:48:50]     "exeErrorDiag": "",
[2025-10-12 10:48:50]     "pilotErrorCode": 0,
[2025-10-12 10:48:50]     "pilotErrorDiag": "",
[2025-10-12 10:48:50]  *** Listing of results directory ***
[2025-10-12 10:48:50] total 415328
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:50 queuedata.json
[2025-10-12 10:48:50] -rwx------ 1 boinc boinc     36292 Oct 11 16:50 runpilot2-wrapper.sh
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:48:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:24 run_atlas
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:24 job.xml
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc 219581804 Oct 12 09:24 EVNT.46676267._002403.pool.root.1
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc    569678 Oct 12 09:24 input.tar.gz
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:24 start_atlas.sh
[2025-10-12 10:48:50] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:24 shared
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:24 boinc_setup_complete
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      6448 Oct 12 09:24 init_data.xml
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:24 boinc_lockfile
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      2550 Oct 12 09:24 pandaJob.out
[2025-10-12 10:48:50] -rw------- 1 boinc boinc    975520 Oct 12 09:24 agis_schedconf.cvmfs.json
[2025-10-12 10:48:50] -rw------- 1 boinc boinc   1560580 Oct 12 09:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:48:50] drwx------ 5 boinc boinc      4096 Oct 12 09:24 pilot3
[2025-10-12 10:48:50] -rw------- 1 boinc boinc 199815153 Oct 12 10:47 HITS.46676269._059544.pool.root.1
[2025-10-12 10:48:50] -rw------- 1 boinc boinc        95 Oct 12 10:47 pilot_heartbeat.json
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc       529 Oct 12 10:48 boinc_task_state.xml
[2025-10-12 10:48:50] -rw------- 1 boinc boinc      1017 Oct 12 10:48 memory_monitor_summary.json
[2025-10-12 10:48:50] -rw------- 1 boinc boinc    266446 Oct 12 10:48 log.46676269._059544.job.log.tgz.1
[2025-10-12 10:48:50] -rw------- 1 boinc boinc      7761 Oct 12 10:48 heartbeat.json
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc        27 Oct 12 10:48 wrapper_checkpoint.txt
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:48 boinc_mmap_file
[2025-10-12 10:48:50] -rw------- 1 boinc boinc       747 Oct 12 10:48 pilotlog.txt
[2025-10-12 10:48:50] -rw------- 1 boinc boinc    737615 Oct 12 10:48 log.46676269._059544.job.log.1
[2025-10-12 10:48:50] -rw------- 1 boinc boinc       357 Oct 12 10:48 output.list
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:48 runtime_log
[2025-10-12 10:48:50] -rw------- 1 boinc boinc   1024000 Oct 12 10:48 result.tar.gz
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      8797 Oct 12 10:48 runtime_log.err
[2025-10-12 10:48:50] -rw------- 1 boinc boinc       662 Oct 12 10:48 JxCODmx6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmf5RMDmef5Mim.diag
[2025-10-12 10:48:50] -rw-r--r-- 1 boinc boinc      9958 Oct 12 10:48 stderr.txt
[2025-10-12 10:48:50] HITS file was successfully produced:
[2025-10-12 10:48:50] -rw------- 1 boinc boinc 199815153 Oct 12 10:47 shared/HITS.pool.root.1
[2025-10-12 10:48:50]  *** Contents of shared directory: ***
[2025-10-12 10:48:50] total 411152
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc 219581804 Oct 12 09:24 ATLAS.root_0
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc    569678 Oct 12 09:24 input.tar.gz
[2025-10-12 10:48:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:24 start_atlas.sh
[2025-10-12 10:48:50] -rw------- 1 boinc boinc 199815153 Oct 12 10:47 HITS.pool.root.1
[2025-10-12 10:48:50] -rw------- 1 boinc boinc   1024000 Oct 12 10:48 result.tar.gz
10:48:52 (1792479): run_atlas exited; CPU time 14275.021229
10:48:52 (1792479): called boinc_finish(0)

</stderr_txt>
]]>

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