Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 04:07:54 (7328): vboxwrapper version 26210
2025-10-13 04:07:54 (7328): BOINC client version: 8.2.4
2025-10-13 04:07:55 (7328): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-10-13 04:07:55 (7328): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 04:07:56 (7328): Create VM. (boinc_7611451b9613ea2d, slot#1)
2025-10-13 04:07:56 (7328): Setting Memory Size for VM. (4400MB)
2025-10-13 04:07:57 (7328): Setting CPU Count for VM. (4)
2025-10-13 04:07:57 (7328): Setting Chipset Options for VM.
2025-10-13 04:07:57 (7328): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 04:07:57 (7328): Setting Boot Options for VM.
2025-10-13 04:07:58 (7328): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 04:07:58 (7328): Enabling VM Network Access.
2025-10-13 04:07:58 (7328): Disabling USB Support for VM.
2025-10-13 04:07:59 (7328): Disabling COM Port Support for VM.
2025-10-13 04:07:59 (7328): Disabling LPT Port Support for VM.
2025-10-13 04:07:59 (7328): Disabling Audio Support for VM.
2025-10-13 04:07:59 (7328): Disabling Clipboard Support for VM.
2025-10-13 04:08:00 (7328): Disabling Drag and Drop Support for VM.
2025-10-13 04:08:00 (7328): Adding storage controller(s) to VM.
2025-10-13 04:08:00 (7328): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 04:08:02 (7328): Adding VirtualBox Guest Additions to VM.
2025-10-13 04:08:03 (7328): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 04:08:03 (7328): forwarding host port 53939 to guest port 80
2025-10-13 04:08:03 (7328): Enabling remote desktop for VM.
2025-10-13 04:08:04 (7328): Enabling shared directory for VM.
2025-10-13 04:08:05 (7328): Starting VM using VBoxManage interface. (boinc_7611451b9613ea2d, slot#1)
2025-10-13 04:08:14 (7328): Successfully started VM. (PID = '15112')
2025-10-13 04:08:14 (7328): Reporting VM Process ID to BOINC.
2025-10-13 04:08:14 (7328): Guest Log: BIOS: VirtualBox 7.1.12
2025-10-13 04:08:14 (7328): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 04:08:14 (7328): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 04:08:14 (7328): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 04:08:14 (7328): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 04:08:14 (7328): Detected: Web Application Enabled (http://localhost:53939)
2025-10-13 04:08:14 (7328): Detected: Remote Desktop Enabled (localhost:53940)
2025-10-13 04:08:14 (7328): Preference change detected
2025-10-13 04:08:14 (7328): Setting CPU throttle for VM. (100%)
2025-10-13 04:08:14 (7328): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 04:08:16 (7328): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 04:08:16 (7328): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 04:08:20 (7328): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 04:08:20 (7328): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 04:08:20 (7328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 04:08:29 (7328): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 04:08:29 (7328): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 04:08:43 (7328): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000206 main     Log opened 2025-10-13T04:08:41.514554000Z
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000372 main     OS Product: Linux
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000420 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000456 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000490 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000491 main     Process ID: 1316
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.000492 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 04:08:43 (7328): Guest Log: 00:00:00.001458 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 04:08:44 (7328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 04:08:44 (7328): Guest Log: [INFO] Mounting shared directory
2025-10-13 04:08:44 (7328): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 04:08:53 (7328): Guest Log: 00:00:10.069164 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 317 109 000ns (GuestNow=1 760 321 333 201 675 000 ns GuestLast=1 760 328 521 518 784 000 ns fSetTimeLastLoop=true )
2025-10-13 04:09:10 (7328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 04:09:10 (7328): Guest Log: [INFO] Detected branch: prod
2025-10-13 04:09:10 (7328): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 04:09:10 (7328): Guest Log: Copying input files
2025-10-13 04:09:12 (7328): Guest Log: Copied input files into RunAtlas.
2025-10-13 04:09:12 (7328): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 04:09:12 (7328): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 04:09:12 (7328): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 04:09:12 (7328): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 04:09:20 (7328): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 04:09:21 (7328): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 04:09:21 (7328): Guest Log: 2.6.3.0 1615 0 32204 151643 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 04:09:23 (7328): Guest Log: copied the webapp to /var/www
2025-10-13 04:09:23 (7328): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-13 04:09:23 (7328): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-13 04:09:23 (7328): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 04:09:23 (7328): Guest Log:  *** Starting ATLAS job. (PandaID=6838633905 taskID=46676269) ***
2025-10-13 05:09:06 (7328): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 08:29:58 (7328): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 08:30:06 (7328): Guest Log: 01:00:30.822671 timesync vgsvcTimeSyncWorker: Radical host time change: 12 061 696 000 000ns (HostNow=1 760 337 005 695 000 000 ns HostLast=1 760 324 943 999 000 000 ns)
2025-10-13 08:30:16 (7328): Guest Log: 01:00:40.831187 timesync vgsvcTimeSyncWorker: Radical guest time change: 12 061 749 083 000ns (GuestNow=1 760 337 015 703 666 000 ns GuestLast=1 760 324 953 954 583 000 ns fSetTimeLastLoop=true )
2025-10-13 09:09:19 (7328): Status Report: Elapsed Time: '6000.000000'
2025-10-13 09:09:19 (7328): Status Report: CPU Time: '21591.203125'
2025-10-13 09:30:30 (7328): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 11:28:32 (7328): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 11:28:39 (7328): Guest Log: 02:01:01.793727 timesync vgsvcTimeSyncWorker: Radical host time change: 7 091 666 000 000ns (HostNow=1 760 347 718 378 000 000 ns HostLast=1 760 340 626 712 000 000 ns)
2025-10-13 11:28:49 (7328): Guest Log: 02:01:11.803147 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 091 721 821 000ns (GuestNow=1 760 347 728 387 500 000 ns GuestLast=1 760 340 636 665 679 000 ns fSetTimeLastLoop=true )
2025-10-13 12:29:21 (7328): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 22:40:48 (7328): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 22:40:57 (7328): Guest Log: 03:01:52.692393 timesync vgsvcTimeSyncWorker: Radical host time change: 36 697 851 000 000ns (HostNow=1 760 388 057 173 000 000 ns HostLast=1 760 351 359 322 000 000 ns)
2025-10-13 22:41:07 (7328): Guest Log: 03:02:02.701951 timesync vgsvcTimeSyncWorker: Radical guest time change: 36 697 906 523 000ns (GuestNow=1 760 388 067 182 640 000 ns GuestLast=1 760 351 369 276 117 000 ns fSetTimeLastLoop=true )
2025-10-13 22:52:51 (7328): Guest Log:  *** Job finished ***
2025-10-13 22:52:51 (7328): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:22,688 | INFO     | [job] control thread has finished
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:24,019 | INFO     | [data] queue_monitor thread has finished
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:42,506 | INFO     | [monitor] cgroup control has ended
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:44,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696821458752)>', '<ExcThread(monitor, started 139696520800000)>']
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:44,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:44,508 | INFO     | [monitor] control thread has ended
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,025 | INFO     | all workflow threads have been joined
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,025 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,025 | INFO     | traces error code: 0
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,189 [wrapper] ==== pilot stdout END ====
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,197 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,205 [wrapper] pilotpid: 6005
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,216 [wrapper] Pilot exit status: 0
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,725 [wrapper] pandaids: 6838633905
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,765 [wrapper] cleanup supervisor_pilot 10355 6006
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,772 [wrapper] Test setup, not cleaning
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,777 [wrapper] apfmon messages muted
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,785 [wrapper] ==== wrapper stdout END ====
2025-10-13 22:52:51 (7328): Guest Log: 2025-10-13 20:52:49,791 [wrapper] ==== wrapper stderr END ====
2025-10-13 22:52:51 (7328): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 22:52:51 (7328): Guest Log:     "exeErrorCode": 0,
2025-10-13 22:52:51 (7328): Guest Log:     "exeErrorDiag": "",
2025-10-13 22:52:51 (7328): Guest Log:     "pilotErrorCode": 0,
2025-10-13 22:52:51 (7328): Guest Log:     "pilotErrorDiag": "",
2025-10-13 22:52:51 (7328): Guest Log:  *** Listing of results directory ***
2025-10-13 22:52:51 (7328): Guest Log: total 197580
2025-10-13 22:52:51 (7328): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 17:07 runpilot2-wrapper.sh
2025-10-13 22:52:51 (7328): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 17:07 pilot3.tar.gz
2025-10-13 22:52:51 (7328): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 17:07 queuedata.json
2025-10-13 22:52:51 (7328): Guest Log: -rwxr-xr-x. 1 atlas atlas      9397 Oct 13 02:09 init_data.xml
2025-10-13 22:52:51 (7328): Guest Log: -rwxr-xr-x. 1 atlas atlas    569671 Oct 13 02:09 input.tar.gz
2025-10-13 22:52:51 (7328): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 02:09 start_atlas.sh
2025-10-13 22:52:51 (7328): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 02:09 EVNT.46676267._002467.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 22:52:51 (7328): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 02:09 pandaJob.out
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas    975595 Oct 13 02:11 agis_schedconf.cvmfs.json
2025-10-13 22:52:51 (7328): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 02:11 pilot3
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas 194734820 Oct 13 20:51 HITS.46676269._061425.pool.root.1
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 13 20:51 memory_monitor_summary.json
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 20:52 agis_ddmendpoints.agis.ALL.json
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas    346709 Oct 13 20:52 log.46676269._061425.job.log.tgz.1
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas        98 Oct 13 20:52 pilot_heartbeat.json
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas      7795 Oct 13 20:52 heartbeat.json
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 13 20:52 pilotlog.txt
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas   1531103 Oct 13 20:52 log.46676269._061425.job.log.1
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 20:52 output.list
2025-10-13 22:52:51 (7328): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 20:52 runtime_log
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas   1894400 Oct 13 20:52 result.tar.gz
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas       665 Oct 13 20:52 sJ1KDmwEsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4GSMDmP0g0rm.diag
2025-10-13 22:52:51 (7328): Guest Log: -rw-r--r--. 1 atlas atlas      8654 Oct 13 20:52 runtime_log.err
2025-10-13 22:52:51 (7328): Guest Log: Looking for outputfile HITS.46676269._061425.pool.root.1
2025-10-13 22:52:51 (7328): Guest Log: HITS file was successfully produced
2025-10-13 22:52:51 (7328): Guest Log: -rw-------. 1 atlas atlas 194734820 Oct 13 20:51 /home/atlas/RunAtlas/HITS.46676269._061425.pool.root.1
2025-10-13 22:52:55 (7328): Guest Log: Successfully finished the ATLAS job!
2025-10-13 22:52:55 (7328): Guest Log: Copying the results back to the shared directory!
2025-10-13 22:52:56 (7328): Guest Log:  *** Contents of shared directory: ***
2025-10-13 22:52:56 (7328): Guest Log: total 407864
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root 220414798 Oct 13 02:07 ATLAS.root_0
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root 194734820 Oct 13 20:52 HITS.pool.root.1
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root      9397 Oct 13 02:07 init_data.xml
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 11 22:55 input.tar.gz
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root   1894400 Oct 13 20:52 result.tar.gz
2025-10-13 22:52:56 (7328): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 22:55 start_atlas.sh
2025-10-13 22:52:56 (7328): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 22:52:56 (7328): VM Completion File Detected.
2025-10-13 22:52:56 (7328): Powering off VM.
2025-10-13 22:52:57 (7328): Successfully stopped VM.
2025-10-13 22:52:57 (7328): Deregistering VM. (boinc_7611451b9613ea2d, slot#1)
2025-10-13 22:52:58 (7328): Removing network bandwidth throttle group from VM.
2025-10-13 22:52:58 (7328): Removing VM from VirtualBox.
2025-10-13 22:53:03 (7328): called boinc_finish(0)

</stderr_txt>
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