Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:02 (13305): wrapper (7.7.26015): starting
18:50:02 (13305): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:50:02] Arguments: --nthreads 12
[2025-10-11 18:50:02] Threads: 12
[2025-10-11 18:50:02] Checking for CVMFS
[2025-10-11 18:50:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:50:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:50:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:50:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:50:03] 2.11.2.0 2916 222017 100356 151599 2 59 18460096 20275201 1 130560 1 107392541 99.984 13384055 12487 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:50:03] CVMFS is ok
[2025-10-11 18:50:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:50:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:50:03] Further information can be found at the LHC@home message board.
[2025-10-11 18:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:50:03] Checking for apptainer binary...
[2025-10-11 18:50:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:50:03] Running /usr/bin/apptainer --version
[2025-10-11 18:50:03] apptainer version 1.3.2-1.el7
[2025-10-11 18:50:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:50:04] c-205-23.aglt2.org
[2025-10-11 18:50:04] apptainer works
[2025-10-11 18:50:04] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:50:04] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:50:04] Starting ATLAS job with PandaID=6837669915
[2025-10-11 18:50:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:00:31]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:00:31]  storage_token=
[2025-10-11 20:00:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837669915/log.46676269._042020.job.log.tgz.1
[2025-10-11 20:00:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/50/log.46676269._042020.job.log.tgz.1
[2025-10-11 20:00:31]  workdir=None
[2025-10-11 20:00:31] ]
[2025-10-11 20:00:31] 2025-10-11 23:59:27,943 | INFO     | transferring file log.46676269._042020.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837669915/log.46676269._042020.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 20:00:31] 2025-10-11 23:59:27,943 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837669915/log.46676269._042020.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._042020.job
[2025-10-11 20:00:31] 2025-10-11 23:59:27,964 | INFO     | adding to output.list: log.46676269._042020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/50/log.46676269._042020.job.log.tg
[2025-10-11 20:00:31] 2025-10-11 23:59:27,965 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 20:00:31] 2025-10-11 23:59:27,965 | INFO     | summary of transferred files:
[2025-10-11 20:00:31] 2025-10-11 23:59:27,966 | INFO     |  -- lfn=log.46676269._042020.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 20:00:31] 2025-10-11 23:59:27,966 | INFO     | stage-out finished correctly
[2025-10-11 20:00:31] 2025-10-11 23:59:28,099 | INFO     | PID=17769 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:00:31] 2025-10-11 23:59:29,099 | INFO     | time since job start (4150s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:30,103 | INFO     | monitor loop #309: job 0:6837669915 is in state 'finished'
[2025-10-11 20:00:31] 2025-10-11 23:59:30,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:00:31] 2025-10-11 23:59:31,105 | INFO     | time since job start (4152s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:31,195 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:00:31] 2025-10-11 23:59:32,613 | INFO     | monitor loop #310: job 0:6837669915 is in state 'finished'
[2025-10-11 20:00:31] 2025-10-11 23:59:32,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:00:31] 2025-10-11 23:59:33,110 | INFO     | time since job start (4154s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:33,600 | INFO     | job 6837669915 has state=finished
[2025-10-11 20:00:31] 2025-10-11 23:59:33,601 | INFO     | preparing for final server update for job 6837669915 in state='finished'
[2025-10-11 20:00:31] 2025-10-11 23:59:33,601 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:00:31] 2025-10-11 23:59:33,601 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:00:31] 2025-10-11 23:59:33,601 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:00:31] 2025-10-11 23:59:33,602 | INFO     | job 6837669915 has finished - writing final server update
[2025-10-11 20:00:31] 2025-10-11 23:59:33,602 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:00:31] 2025-10-11 23:59:33,603 | INFO     | executing command: lscpu
[2025-10-11 20:00:31] 2025-10-11 23:59:33,629 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:00:31] 2025-10-11 23:59:35,116 | INFO     | monitor loop #311: job 0:6837669915 is in state 'finished'
[2025-10-11 20:00:31] 2025-10-11 23:59:35,116 | INFO     | time since job start (4156s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:35,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:00:31] 2025-10-11 23:59:37,125 | INFO     | time since job start (4158s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:37,623 | INFO     | monitor loop #312: job 0:6837669915 is in state 'finished'
[2025-10-11 20:00:31] 2025-10-11 23:59:37,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,130 | INFO     | time since job start (4160s) is within the limit (172800.0s)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,479 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 20:00:31] 2025-10-11 23:59:39,483 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837669915/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,486 | INFO     | extracted standard info from prmon json
[2025-10-11 20:00:31] 2025-10-11 23:59:39,487 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:00:31] 2025-10-11 23:59:39,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:00:31] 2025-10-11 23:59:39,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:00:31] 2025-10-11 23:59:39,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:00:31] 2025-10-11 23:59:39,489 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:00:31] 2025-10-11 23:59:39,489 | INFO     | sum of square deviations: 70364110.0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | sum of deviations: -5581055188.000003
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | mean x: 1760225183.0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | mean y: 2743722.8032786883
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | -- intersect: 139618151202.98608
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | intersect: 139618151202.98608
[2025-10-11 20:00:31] 2025-10-11 23:59:39,490 | INFO     | chi2: 0.05047787168594846
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | -- intersect: 139618151202.98608
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | current memory leak: -79.32 B/s (using 61 data points, chi2=0.05)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | ..............................
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | . Timing measurements:
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | . get job = 0 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | . initial setup = 2 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,491 | INFO     | . payload setup = 7 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,492 | INFO     | . stage-in = 0 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,492 | INFO     | . payload execution = 4120 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,492 | INFO     | . stage-out = 0 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,492 | INFO     | . log creation = 0 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,492 | INFO     | ..............................
[2025-10-11 20:00:31] 2025-10-11 23:59:39,573 | INFO     | 
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | job summary report
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | --------------------------------------------------
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | PanDA job id: 6837669915
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | task id: 46676269
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | errors: (none)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | pilot state: finished 
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | transexitcode: 0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | exeerrorcode: 0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | exeerrordiag: 
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | exitcode: 0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | exitmsg: OK
[2025-10-11 20:00:31] 2025-10-11 23:59:39,575 | INFO     | cpuconsumptiontime: 45172 s
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | nevents: 400
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | neventsw: 0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | pid: 24159
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | pgrp: 24159
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | corecount: 12
[2025-10-11 20:00:31] 2025-10-11 23:59:39,576 | INFO     | event service: False
[2025-10-11 20:00:31] 2025-10-11 23:59:39,577 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4131: 2375072, 4132: 2384070, 4135: 2384254, 4144: 2384448}
[2025-10-11 20:00:31] 2025-10-11 23:59:39,577 | INFO     | --------------------------------------------------
[2025-10-11 20:00:31] 2025-10-11 23:59:39,577 | INFO     | 
[2025-10-11 20:00:31] 2025-10-11 23:59:39,577 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 20:00:31] 2025-10-11 23:59:39,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | job 6837669915 has completed (purged errors)
[2025-10-11 20:00:31] 2025-10-11 23:59:39,605 | INFO     | overall cleanup function is called
[2025-10-11 20:00:31] 2025-10-11 23:59:40,614 | INFO     | --- collectZombieJob: --- 10, [24159]
[2025-10-11 20:00:31] 2025-10-11 23:59:40,614 | INFO     | zombie collector waiting for pid 24159
[2025-10-11 20:00:31] 2025-10-11 23:59:40,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:00:31] 2025-10-11 23:59:40,614 | INFO     | collected zombie processes
[2025-10-11 20:00:31] 2025-10-11 23:59:40,615 | INFO     | will attempt to kill all subprocesses of pid=24159
[2025-10-11 20:00:31] 2025-10-11 23:59:40,705 | INFO     | process IDs to be killed: [24159] (in reverse order)
[2025-10-11 20:00:31] 2025-10-11 23:59:40,754 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:00:31] 2025-10-11 23:59:40,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:00:31] 2025-10-11 23:59:40,758 | INFO     | did not find any defunct processes belonging to 24159
[2025-10-11 20:00:31] 2025-10-11 23:59:40,761 | INFO     | did not find any defunct processes belonging to 24159
[2025-10-11 20:00:31] 2025-10-11 23:59:40,761 | INFO     | ready for new job
[2025-10-11 20:00:31] 2025-10-11 23:59:40,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:00:31] 2025-10-11 23:59:40,762 | INFO     | ***************************************
[2025-10-11 20:00:31] 2025-10-11 23:59:40,763 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:00:31] 2025-10-11 23:59:40,763 | INFO     | ***************************************
[2025-10-11 20:00:31] 2025-10-11 23:59:40,763 | INFO     | 
[2025-10-11 20:00:31] 2025-10-11 23:59:40,763 | INFO     | architecture information:
[2025-10-11 20:00:31] 2025-10-11 23:59:40,764 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:00:31] 2025-10-11 23:59:40,779 | INFO     | cat /etc/os-release:
[2025-10-11 20:00:31] NAME="CentOS Linux"
[2025-10-11 20:00:31] VERSION="7 (Core)"
[2025-10-11 20:00:31] ID="centos"
[2025-10-11 20:00:31] ID_LIKE="rhel fedora"
[2025-10-11 20:00:31] VERSION_ID="7"
[2025-10-11 20:00:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:00:31] ANSI_COLOR="0;31"
[2025-10-11 20:00:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:00:31] HOME_URL="https://www.centos.org/"
[2025-10-11 20:00:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:00:31] 
[2025-10-11 20:00:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:00:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:00:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:00:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:00:31] 
[2025-10-11 20:00:31] 2025-10-11 23:59:40,779 | INFO     | ***************************************
[2025-10-11 20:00:31] 2025-10-11 23:59:41,282 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 20:00:31] 2025-10-11 23:59:41,298 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-11 20:00:31] 2025-10-11 23:59:41,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:00:31] 2025-10-11 23:59:41,298 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:00:31] 2025-10-11 23:59:41,298 | INFO     | update_server=False
[2025-10-11 20:00:31] 2025-10-11 23:59:41,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:00:31] 2025-10-11 23:59:41,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:00:31] 2025-10-11 23:59:41,299 | INFO     | aborting loop
[2025-10-11 20:00:31] 2025-10-11 23:59:41,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:00:31] 2025-10-11 23:59:41,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:00:31] 2025-10-11 23:59:41,546 | INFO     | all payload control threads have been joined
[2025-10-11 20:00:31] 2025-10-11 23:59:41,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:00:31] 2025-10-11 23:59:41,838 | INFO     | all job control threads have been joined
[2025-10-11 20:00:31] 2025-10-11 23:59:41,954 | INFO     | all data control threads have been joined
[2025-10-11 20:00:31] 2025-10-11 23:59:42,304 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,305 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,305 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,512 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,551 | INFO     | [payload] control thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,619 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,844 | INFO     | [job] control thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,890 | INFO     | [job] validate thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:42,960 | INFO     | [data] control thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,257 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,305 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,532 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,538 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:43,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:00:31] 2025-10-11 23:59:45,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:00:31] 2025-10-12 00:00:12,332 | INFO     | PID=17769 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:00:31] 2025-10-12 00:00:12,333 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:00:31] 2025-10-12 00:00:12,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:00:31] 2025-10-12 00:00:12,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:00:31] 2025-10-12 00:00:25,932 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:00:31] 2025-10-12 00:00:26,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832874125120)>', '<ExcThread(monitor, started 139832290424576)>']
[2025-10-11 20:00:31] 2025-10-12 00:00:26,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:00:31] 2025-10-12 00:00:26,393 | INFO     | [monitor] control thread has ended
[2025-10-11 20:00:31] 2025-10-12 00:00:31,372 | INFO     | all workflow threads have been joined
[2025-10-11 20:00:31] 2025-10-12 00:00:31,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:00:31] 2025-10-12 00:00:31,380 | INFO     | traces error code: 0
[2025-10-11 20:00:31] 2025-10-12 00:00:31,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:00:31] 2025-10-12 00:00:31,465 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:00:31] 2025-10-12 00:00:31,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:00:31] 2025-10-12 00:00:31,473 [wrapper] pilotpid: 17769
[2025-10-11 20:00:31] 2025-10-12 00:00:31,477 [wrapper] Pilot exit status: 0
[2025-10-11 20:00:31] 2025-10-12 00:00:31,492 [wrapper] pandaids: 6837669915
[2025-10-11 20:00:31] 2025-10-12 00:00:31,539 [wrapper] cleanup supervisor_pilot 31155 17770
[2025-10-11 20:00:31] 2025-10-12 00:00:31,543 [wrapper] Test setup, not cleaning
[2025-10-11 20:00:31] 2025-10-12 00:00:31,547 [wrapper] apfmon messages muted
[2025-10-11 20:00:31] 2025-10-12 00:00:31,551 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:00:31] 2025-10-12 00:00:31,555 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:00:31]  *** Error codes and diagnostics ***
[2025-10-11 20:00:31]     "exeErrorCode": 0,
[2025-10-11 20:00:31]     "exeErrorDiag": "",
[2025-10-11 20:00:31]     "pilotErrorCode": 0,
[2025-10-11 20:00:31]     "pilotErrorDiag": "",
[2025-10-11 20:00:31]  *** Listing of results directory ***
[2025-10-11 20:00:31] total 407360
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 12:45 pilot3.tar.gz
[2025-10-11 20:00:31] -rwx------ 1 boincer umatlas     36292 Oct 10 12:58 runpilot2-wrapper.sh
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 12:58 queuedata.json
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas       100 Oct 11 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:00:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 18:50 run_atlas
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas       105 Oct 11 18:50 job.xml
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas 220845241 Oct 11 18:50 EVNT.46676267._001703.pool.root.1
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:50 start_atlas.sh
[2025-10-11 20:00:31] drwxrwx--x 2 boincer umatlas      4096 Oct 11 18:50 shared
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 18:50 input.tar.gz
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas         0 Oct 11 18:50 boinc_lockfile
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 18:50 pandaJob.out
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas    975520 Oct 11 18:50 agis_schedconf.cvmfs.json
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas   1560580 Oct 11 18:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:00:31] drwx------ 5 boincer umatlas      4096 Oct 11 18:50 pilot3
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 19:55 init_data.xml
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas 190419055 Oct 11 19:58 HITS.46676269._042020.pool.root.1
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas       530 Oct 11 19:59 boinc_task_state.xml
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas        95 Oct 11 19:59 pilot_heartbeat.json
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas      1049 Oct 11 19:59 memory_monitor_summary.json
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas    375243 Oct 11 19:59 log.46676269._042020.job.log.tgz.1
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas      7856 Oct 11 19:59 heartbeat.json
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:00 boinc_mmap_file
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas        27 Oct 11 20:00 wrapper_checkpoint.txt
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas      4746 Oct 11 20:00 pilotlog.txt
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas    607286 Oct 11 20:00 log.46676269._042020.job.log.1
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas       357 Oct 11 20:00 output.list
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:00 runtime_log
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas   1003520 Oct 11 20:00 result.tar.gz
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas       659 Oct 11 20:00 wjPKDm5cVR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCIQMDmEgCYom.diag
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 20:00 runtime_log.err
[2025-10-11 20:00:31] -rw-r--r-- 1 boincer umatlas     22298 Oct 11 20:00 stderr.txt
[2025-10-11 20:00:31] HITS file was successfully produced:
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas 190419055 Oct 11 19:58 shared/HITS.pool.root.1
[2025-10-11 20:00:31]  *** Contents of shared directory: ***
[2025-10-11 20:00:31] total 403192
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas 220845241 Oct 11 18:50 ATLAS.root_0
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:50 start_atlas.sh
[2025-10-11 20:00:31] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 18:50 input.tar.gz
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas 190419055 Oct 11 19:58 HITS.pool.root.1
[2025-10-11 20:00:31] -rw------- 1 boincer umatlas   1003520 Oct 11 20:00 result.tar.gz
20:00:33 (13305): run_atlas exited; CPU time 45144.567011
20:00:33 (13305): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN