Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:02:40 (3778159): wrapper (7.7.26015): starting
20:02:40 (3778159): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 20:02:40] Arguments: --nthreads 4
[2025-10-12 20:02:40] Threads: 4
[2025-10-12 20:02:40] Checking for CVMFS
[2025-10-12 20:02:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:02:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:02:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:02:40] 2.12.7.0 3347374 6412 62480 151630 3 57 3481655 6144000 1834 130560 3 13171631 99.996 223665 322 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-10-12 20:02:40] CVMFS is ok
[2025-10-12 20:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:02:40] Checking for apptainer binary...
[2025-10-12 20:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:02:40] Running /usr/bin/apptainer --version
[2025-10-12 20:02:40] apptainer version 1.4.2
[2025-10-12 20:02:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:02:40] Ryzen8
[2025-10-12 20:02:40] apptainer works
[2025-10-12 20:02:40] Set ATHENA_PROC_NUMBER=4
[2025-10-12 20:02:40] Set ATHENA_CORE_NUMBER=4
[2025-10-12 20:02:40] Starting ATLAS job with PandaID=6838453434
[2025-10-12 20:02:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:22:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:22:59]  lfn=log.46676269._059277.job.log.tgz.1
[2025-10-12 21:22:59]  mtime=0
[2025-10-12 21:22:59]  protocol_id=None
[2025-10-12 21:22:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 21:22:59]  replicas=None
[2025-10-12 21:22:59]  scope=mc23_13p6TeV
[2025-10-12 21:22:59]  status=None
[2025-10-12 21:22:59]  status_code=0
[2025-10-12 21:22:59]  storage_token=
[2025-10-12 21:22:59]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6838453434/log.46676269._059277.job.log.tgz.1
[2025-10-12 21:22:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/ec/log.46676269._059277.job.log.tgz.1
[2025-10-12 21:22:59]  workdir=None
[2025-10-12 21:22:59] ]
[2025-10-12 21:22:59] 2025-10-12 19:22:18,197 | INFO     | transferring file log.46676269._059277.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838453434/log.46676269._059277.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 21:22:59] 2025-10-12 19:22:18,197 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838453434/log.46676269._059277.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._059277.job
[2025-10-12 21:22:59] 2025-10-12 19:22:18,207 | INFO     | adding to output.list: log.46676269._059277.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/ec/log.46676269._059277.job.log.tg
[2025-10-12 21:22:59] 2025-10-12 19:22:18,207 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:22:59] 2025-10-12 19:22:18,207 | INFO     | summary of transferred files:
[2025-10-12 21:22:59] 2025-10-12 19:22:18,207 | INFO     |  -- lfn=log.46676269._059277.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:22:59] 2025-10-12 19:22:18,208 | INFO     | stage-out finished correctly
[2025-10-12 21:22:59] 2025-10-12 19:22:18,725 | INFO     | monitor loop #357: job 0:6838453434 is in state 'finished'
[2025-10-12 21:22:59] 2025-10-12 19:22:18,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:22:59] 2025-10-12 19:22:19,661 | INFO     | time since job start (4774s) is within the limit (172800.0s)
[2025-10-12 21:22:59] 2025-10-12 19:22:20,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:22:59] 2025-10-12 19:22:20,485 | INFO     | job 6838453434 has state=finished
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | preparing for final server update for job 6838453434 in state='finished'
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | job 6838453434 has finished - writing final server update
[2025-10-12 21:22:59] 2025-10-12 19:22:20,486 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:22:59] 2025-10-12 19:22:20,487 | INFO     | executing command: lscpu
[2025-10-12 21:22:59] 2025-10-12 19:22:20,499 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:22:59] 2025-10-12 19:22:21,228 | INFO     | monitor loop #358: job 0:6838453434 is in state 'finished'
[2025-10-12 21:22:59] 2025-10-12 19:22:21,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:22:59] 2025-10-12 19:22:21,665 | INFO     | time since job start (4776s) is within the limit (172800.0s)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,356 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:22:59] 2025-10-12 19:22:22,357 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4339.313083333333
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838453434/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | INFO     | extracted standard info from prmon json
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:22:59] 2025-10-12 19:22:22,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:22:59] 2025-10-12 19:22:22,360 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:22:59] 2025-10-12 19:22:22,360 | INFO     | sum of square deviations: 110960220.0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,360 | INFO     | sum of deviations: 885663818.9999996
[2025-10-12 21:22:59] 2025-10-12 19:22:22,360 | INFO     | mean x: 1760294624.0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | mean y: 2359594.3943661973
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | -- intersect: -14047984387.052395
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | intersect: -14047984387.052395
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | chi2: 0.0013188624006703943
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | -- intersect: -14047984387.052395
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | current memory leak: 7.98 B/s (using 71 data points, chi2=0.00)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | could have reported an average CPU frequency of 4338 MHz (6 samples)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | ..............................
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . Timing measurements:
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . get job = 0 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . initial setup = 0 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . payload setup = 2 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . stage-in = 0 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . payload execution = 4752 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . stage-out = 0 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | . log creation = 0 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,361 | INFO     | ..............................
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | 
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | job summary report
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | --------------------------------------------------
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | PanDA job id: 6838453434
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | task id: 46676269
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | errors: (none)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | pilot state: finished 
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | transexitcode: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | exeerrorcode: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | exeerrordiag: 
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | exitcode: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | exitmsg: OK
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | cpuconsumptiontime: 18468 s
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | nevents: 400
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | neventsw: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | pid: 3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | pgrp: 3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | corecount: 4
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | event service: False
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4758: 2375444, 4759: 2384442, 4761: 2384498, 4763: 2384820}
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | --------------------------------------------------
[2025-10-12 21:22:59] 2025-10-12 19:22:22,409 | INFO     | 
[2025-10-12 21:22:59] 2025-10-12 19:22:22,410 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 21:22:59] 2025-10-12 19:22:22,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | job 6838453434 has completed (purged errors)
[2025-10-12 21:22:59] 2025-10-12 19:22:22,419 | INFO     | overall cleanup function is called
[2025-10-12 21:22:59] 2025-10-12 19:22:23,426 | INFO     | --- collectZombieJob: --- 10, [3788301]
[2025-10-12 21:22:59] 2025-10-12 19:22:23,426 | INFO     | zombie collector waiting for pid 3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:23,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:22:59] 2025-10-12 19:22:23,426 | INFO     | collected zombie processes
[2025-10-12 21:22:59] 2025-10-12 19:22:23,426 | INFO     | will attempt to kill all subprocesses of pid=3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:23,480 | INFO     | process IDs to be killed: [3788301] (in reverse order)
[2025-10-12 21:22:59] 2025-10-12 19:22:23,507 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:22:59] 2025-10-12 19:22:23,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:22:59] 2025-10-12 19:22:23,509 | INFO     | did not find any defunct processes belonging to 3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:23,511 | INFO     | did not find any defunct processes belonging to 3788301
[2025-10-12 21:22:59] 2025-10-12 19:22:23,511 | INFO     | ready for new job
[2025-10-12 21:22:59] 2025-10-12 19:22:23,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | ***************************************
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | ***************************************
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | 
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | architecture information:
[2025-10-12 21:22:59] 2025-10-12 19:22:23,512 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:22:59] 2025-10-12 19:22:23,521 | INFO     | cat /etc/os-release:
[2025-10-12 21:22:59] NAME="CentOS Linux"
[2025-10-12 21:22:59] VERSION="7 (Core)"
[2025-10-12 21:22:59] ID="centos"
[2025-10-12 21:22:59] ID_LIKE="rhel fedora"
[2025-10-12 21:22:59] VERSION_ID="7"
[2025-10-12 21:22:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:22:59] ANSI_COLOR="0;31"
[2025-10-12 21:22:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:22:59] HOME_URL="https://www.centos.org/"
[2025-10-12 21:22:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:22:59] 
[2025-10-12 21:22:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:22:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:22:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:22:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:22:59] 
[2025-10-12 21:22:59] 2025-10-12 19:22:23,521 | INFO     | ***************************************
[2025-10-12 21:22:59] 2025-10-12 19:22:24,024 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 21:22:59] 2025-10-12 19:22:24,031 | INFO     | sufficient remaining disk space (99097772032 B)
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | INFO     | update_server=False
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:22:59] 2025-10-12 19:22:24,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:22:59] 2025-10-12 19:22:24,104 | INFO     | all payload control threads have been joined
[2025-10-12 21:22:59] 2025-10-12 19:22:24,716 | INFO     | all data control threads have been joined
[2025-10-12 21:22:59] 2025-10-12 19:22:24,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:22:59] 2025-10-12 19:22:24,736 | INFO     | aborting loop
[2025-10-12 21:22:59] 2025-10-12 19:22:25,035 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,036 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,109 | INFO     | [payload] control thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,241 | INFO     | all job control threads have been joined
[2025-10-12 21:22:59] 2025-10-12 19:22:25,388 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,658 | INFO     | [job] validate thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,718 | INFO     | [data] control thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,735 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,741 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,817 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:25,925 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,035 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,245 | INFO     | [job] control thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,355 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,378 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:26,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:22:59] 2025-10-12 19:22:30,408 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:22:59] 2025-10-12 19:22:53,088 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:22:59] 2025-10-12 19:22:54,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944875173696)>', '<ExcThread(monitor, started 139944253187840)>']
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | INFO     | PID=3781871 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | INFO     | .. there are 3 such processes running
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:22:59] 2025-10-12 19:22:54,793 | INFO     | [monitor] control thread has ended
[2025-10-12 21:22:59] 2025-10-12 19:22:59,238 | INFO     | all workflow threads have been joined
[2025-10-12 21:22:59] 2025-10-12 19:22:59,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:22:59] 2025-10-12 19:22:59,238 | INFO     | traces error code: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:59,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:22:59] 2025-10-12 19:22:59,308 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:22:59] 2025-10-12 19:22:59,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:22:59] 2025-10-12 19:22:59,310 [wrapper] pilotpid: 3781871
[2025-10-12 21:22:59] 2025-10-12 19:22:59,312 [wrapper] Pilot exit status: 0
[2025-10-12 21:22:59] 2025-10-12 19:22:59,321 [wrapper] pandaids: 6838453434
[2025-10-12 21:22:59] 2025-10-12 19:22:59,351 [wrapper] cleanup supervisor_pilot 3827800 3781872
[2025-10-12 21:22:59] 2025-10-12 19:22:59,353 [wrapper] Test setup, not cleaning
[2025-10-12 21:22:59] 2025-10-12 19:22:59,354 [wrapper] apfmon messages muted
[2025-10-12 21:22:59] 2025-10-12 19:22:59,355 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:22:59] 2025-10-12 19:22:59,357 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:22:59]  *** Error codes and diagnostics ***
[2025-10-12 21:22:59]     "exeErrorCode": 0,
[2025-10-12 21:22:59]     "exeErrorDiag": "",
[2025-10-12 21:22:59]     "pilotErrorCode": 0,
[2025-10-12 21:22:59]     "pilotErrorDiag": "",
[2025-10-12 21:22:59]  *** Listing of results directory ***
[2025-10-12 21:22:59] insgesamt 412804
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc    557409 11. Okt 16:01 pilot3.tar.gz
[2025-10-12 21:22:59] -rwx------ 1 boinc boinc     36292 11. Okt 16:22 runpilot2-wrapper.sh
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc      5112 11. Okt 16:22 queuedata.json
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc       100 12. Okt 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:22:59] -rwxr-xr-x 1 boinc boinc      7986 12. Okt 20:02 run_atlas
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc       105 12. Okt 20:02 job.xml
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc     15120 12. Okt 20:02 start_atlas.sh
[2025-10-12 21:22:59] drwxrwx--x 2 boinc boinc      4096 12. Okt 20:02 shared
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc    569679 12. Okt 20:02 input.tar.gz
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc      9582 12. Okt 20:02 init_data.xml
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc 223506768 12. Okt 20:02 EVNT.46676267._002383.pool.root.1
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc         0 12. Okt 20:02 boinc_lockfile
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc      2550 12. Okt 20:02 pandaJob.out
[2025-10-12 21:22:59] -rw------- 1 boinc boinc    975528 12. Okt 20:02 agis_schedconf.cvmfs.json
[2025-10-12 21:22:59] -rw------- 1 boinc boinc   1560580 12. Okt 20:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:22:59] drwx------ 5 boinc boinc      4096 12. Okt 20:02 pilot3
[2025-10-12 21:22:59] -rw------- 1 boinc boinc 193360508 12. Okt 21:21 HITS.46676269._059277.pool.root.1
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc       529 12. Okt 21:22 boinc_task_state.xml
[2025-10-12 21:22:59] -rw------- 1 boinc boinc        95 12. Okt 21:22 pilot_heartbeat.json
[2025-10-12 21:22:59] -rw------- 1 boinc boinc      1022 12. Okt 21:22 memory_monitor_summary.json
[2025-10-12 21:22:59] -rw------- 1 boinc boinc    255549 12. Okt 21:22 log.46676269._059277.job.log.tgz.1
[2025-10-12 21:22:59] -rw------- 1 boinc boinc      7759 12. Okt 21:22 heartbeat.json
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc        27 12. Okt 21:22 wrapper_checkpoint.txt
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc      8192 12. Okt 21:22 boinc_mmap_file
[2025-10-12 21:22:59] -rw------- 1 boinc boinc      4823 12. Okt 21:22 pilotlog.txt
[2025-10-12 21:22:59] -rw------- 1 boinc boinc    710828 12. Okt 21:22 log.46676269._059277.job.log.1
[2025-10-12 21:22:59] -rw------- 1 boinc boinc       357 12. Okt 21:22 output.list
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc       620 12. Okt 21:22 runtime_log
[2025-10-12 21:22:59] -rw------- 1 boinc boinc    983040 12. Okt 21:22 result.tar.gz
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc      8663 12. Okt 21:22 runtime_log.err
[2025-10-12 21:22:59] -rw------- 1 boinc boinc       641 12. Okt 21:22 FgGKDmzfpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmefgNDmMSaMFn.diag
[2025-10-12 21:22:59] -rw-r--r-- 1 boinc boinc     21311 12. Okt 21:22 stderr.txt
[2025-10-12 21:22:59] HITS file was successfully produced:
[2025-10-12 21:22:59] -rw------- 1 boinc boinc 193360508 12. Okt 21:21 shared/HITS.pool.root.1
[2025-10-12 21:22:59]  *** Contents of shared directory: ***
[2025-10-12 21:22:59] insgesamt 408648
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc     15120 12. Okt 20:02 start_atlas.sh
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc    569679 12. Okt 20:02 input.tar.gz
[2025-10-12 21:22:59] -rw-r--r-- 2 boinc boinc 223506768 12. Okt 20:02 ATLAS.root_0
[2025-10-12 21:22:59] -rw------- 1 boinc boinc 193360508 12. Okt 21:21 HITS.pool.root.1
[2025-10-12 21:22:59] -rw------- 1 boinc boinc    983040 12. Okt 21:22 result.tar.gz
21:23:00 (3778159): run_atlas exited; CPU time 18501.070956
21:23:00 (3778159): called boinc_finish(0)

</stderr_txt>
]]>

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