Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:56 (27011): wrapper (7.7.26015): starting
18:48:56 (27011): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:48:56] Arguments: --nthreads 4
[2025-10-11 18:48:56] Threads: 4
[2025-10-11 18:48:56] Checking for CVMFS
[2025-10-11 18:48:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:48:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:48:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:48:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:48:56] 2.11.2.0 2311 41824 69560 151599 0 59 19495591 20275201 1 130560 0 21758844 99.989 1354114 55828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:48:56] CVMFS is ok
[2025-10-11 18:48:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:48:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:48:56] Further information can be found at the LHC@home message board.
[2025-10-11 18:48:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:48:56] Checking for apptainer binary...
[2025-10-11 18:48:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:48:56] Running /usr/bin/apptainer --version
[2025-10-11 18:48:56] apptainer version 1.3.2-1.el7
[2025-10-11 18:48:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:48:57] c-205-34.aglt2.org
[2025-10-11 18:48:57] apptainer works
[2025-10-11 18:48:57] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:48:57] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:48:57] Starting ATLAS job with PandaID=6838634729
[2025-10-11 18:48:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:19:34]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:19:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/12/log.46676269._062024.job.log.tgz.1
[2025-10-11 20:19:34]  workdir=None
[2025-10-11 20:19:34] ]
[2025-10-11 20:19:34] 2025-10-12 00:18:51,517 | INFO     | transferring file log.46676269._062024.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838634729/log.46676269._062024.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 20:19:34] 2025-10-12 00:18:51,517 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838634729/log.46676269._062024.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._062024.job
[2025-10-11 20:19:34] 2025-10-12 00:18:51,529 | INFO     | adding to output.list: log.46676269._062024.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/12/log.46676269._062024.job.log.tg
[2025-10-11 20:19:34] 2025-10-12 00:18:51,529 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 20:19:34] 2025-10-12 00:18:51,529 | INFO     | summary of transferred files:
[2025-10-11 20:19:34] 2025-10-12 00:18:51,529 | INFO     |  -- lfn=log.46676269._062024.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 20:19:34] 2025-10-12 00:18:51,530 | INFO     | stage-out finished correctly
[2025-10-11 20:19:34] 2025-10-12 00:18:51,781 | WARNING  | process 4765 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 20:19:34] 2025-10-12 00:18:51,781 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634729/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:19:34] 2025-10-12 00:18:51,807 | INFO     | number of running child processes to parent process 4765: 1
[2025-10-11 20:19:34] 2025-10-12 00:18:51,807 | INFO     | maximum number of monitored processes: 6
[2025-10-11 20:19:34] 2025-10-12 00:18:53,013 | INFO     | time since job start (5387s) is within the limit (172800.0s)
[2025-10-11 20:19:34] 2025-10-12 00:18:54,310 | INFO     | monitor loop #408: job 0:6838634729 is in state 'finished'
[2025-10-11 20:19:34] 2025-10-12 00:18:54,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:19:34] 2025-10-12 00:18:54,902 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:19:34] 2025-10-12 00:18:55,018 | INFO     | time since job start (5389s) is within the limit (172800.0s)
[2025-10-11 20:19:34] 2025-10-12 00:18:56,058 | INFO     | PID=30703 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:19:34] 2025-10-12 00:18:56,813 | INFO     | monitor loop #409: job 0:6838634729 is in state 'finished'
[2025-10-11 20:19:34] 2025-10-12 00:18:56,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:19:34] 2025-10-12 00:18:57,059 | INFO     | time since job start (5391s) is within the limit (172800.0s)
[2025-10-11 20:19:34] 2025-10-12 00:18:57,184 | INFO     | job 6838634729 has state=finished
[2025-10-11 20:19:34] 2025-10-12 00:18:57,185 | INFO     | preparing for final server update for job 6838634729 in state='finished'
[2025-10-11 20:19:34] 2025-10-12 00:18:57,185 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:19:34] 2025-10-12 00:18:57,185 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:19:34] 2025-10-12 00:18:57,185 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:19:34] 2025-10-12 00:18:57,186 | INFO     | job 6838634729 has finished - writing final server update
[2025-10-11 20:19:34] 2025-10-12 00:18:57,186 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:19:34] 2025-10-12 00:18:57,187 | INFO     | executing command: lscpu
[2025-10-11 20:19:34] 2025-10-12 00:18:57,212 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:19:34] 2025-10-12 00:18:59,060 | INFO     | time since job start (5393s) is within the limit (172800.0s)
[2025-10-11 20:19:34] 2025-10-12 00:18:59,316 | INFO     | monitor loop #410: job 0:6838634729 is in state 'finished'
[2025-10-11 20:19:34] 2025-10-12 00:18:59,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,066 | INFO     | time since job start (5395s) is within the limit (172800.0s)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,481 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:19:34] 2025-10-12 00:19:01,482 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 2186.32475
[2025-10-11 20:19:34] 2025-10-12 00:19:01,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634729/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,483 | INFO     | extracted standard info from prmon json
[2025-10-11 20:19:34] 2025-10-12 00:19:01,483 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:19:34] 2025-10-12 00:19:01,483 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:19:34] 2025-10-12 00:19:01,483 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:19:34] 2025-10-12 00:19:01,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | sum of square deviations: 164765880.0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | sum of deviations: -9638102724.0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | mean x: 1760225713.0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | mean y: 2403062.135802469
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | -- intersect: 102968115619.37242
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | intersect: 102968115619.37242
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | chi2: 0.09162111654284895
[2025-10-11 20:19:34] 2025-10-12 00:19:01,485 | INFO     | -- intersect: 102968115619.37242
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | current memory leak: -58.50 B/s (using 81 data points, chi2=0.09)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | could have reported an average CPU frequency of 2704 MHz (6 samples)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | ..............................
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . Timing measurements:
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . get job = 0 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . initial setup = 2 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . payload setup = 4 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . stage-in = 0 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . payload execution = 5363 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . stage-out = 0 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | . log creation = 0 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,486 | INFO     | ..............................
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | 
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | job summary report
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | --------------------------------------------------
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | PanDA job id: 6838634729
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | task id: 46676269
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | errors: (none)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | pilot state: finished 
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | transexitcode: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | exeerrorcode: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | exeerrordiag: 
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | exitcode: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | exitmsg: OK
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | cpuconsumptiontime: 20791 s
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | nevents: 400
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | neventsw: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,665 | INFO     | pid: 4765
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | pgrp: 4765
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | corecount: 4
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | event service: False
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | sizes: {0: 2348855, 3: 2349117, 10: 2349145, 5371: 2375785, 5372: 2384783, 5375: 2384839, 5382: 2385161}
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | --------------------------------------------------
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | 
[2025-10-11 20:19:34] 2025-10-12 00:19:01,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 20:19:34] 2025-10-12 00:19:01,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:19:34] 2025-10-12 00:19:01,678 | INFO     | job 6838634729 has completed (purged errors)
[2025-10-11 20:19:34] 2025-10-12 00:19:01,678 | INFO     | overall cleanup function is called
[2025-10-11 20:19:34] 2025-10-12 00:19:02,684 | INFO     | --- collectZombieJob: --- 10, [4765]
[2025-10-11 20:19:34] 2025-10-12 00:19:02,684 | INFO     | zombie collector waiting for pid 4765
[2025-10-11 20:19:34] 2025-10-12 00:19:02,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:19:34] 2025-10-12 00:19:02,684 | INFO     | collected zombie processes
[2025-10-11 20:19:34] 2025-10-12 00:19:02,684 | INFO     | will attempt to kill all subprocesses of pid=4765
[2025-10-11 20:19:34] 2025-10-12 00:19:02,716 | INFO     | process IDs to be killed: [4765] (in reverse order)
[2025-10-11 20:19:34] 2025-10-12 00:19:02,738 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:19:34] 2025-10-12 00:19:02,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:19:34] 2025-10-12 00:19:02,739 | INFO     | did not find any defunct processes belonging to 4765
[2025-10-11 20:19:34] 2025-10-12 00:19:02,740 | INFO     | did not find any defunct processes belonging to 4765
[2025-10-11 20:19:34] 2025-10-12 00:19:02,740 | INFO     | ready for new job
[2025-10-11 20:19:34] 2025-10-12 00:19:02,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | ***************************************
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | ***************************************
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | 
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | architecture information:
[2025-10-11 20:19:34] 2025-10-12 00:19:02,741 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:19:34] 2025-10-12 00:19:02,750 | INFO     | cat /etc/os-release:
[2025-10-11 20:19:34] NAME="CentOS Linux"
[2025-10-11 20:19:34] VERSION="7 (Core)"
[2025-10-11 20:19:34] ID="centos"
[2025-10-11 20:19:34] ID_LIKE="rhel fedora"
[2025-10-11 20:19:34] VERSION_ID="7"
[2025-10-11 20:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:19:34] ANSI_COLOR="0;31"
[2025-10-11 20:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:19:34] HOME_URL="https://www.centos.org/"
[2025-10-11 20:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:19:34] 
[2025-10-11 20:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:19:34] 
[2025-10-11 20:19:34] 2025-10-12 00:19:02,750 | INFO     | ***************************************
[2025-10-11 20:19:34] 2025-10-12 00:19:03,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 20:19:34] 2025-10-12 00:19:03,268 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-11 20:19:34] 2025-10-12 00:19:03,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:19:34] 2025-10-12 00:19:03,269 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:19:34] 2025-10-12 00:19:03,269 | INFO     | update_server=False
[2025-10-11 20:19:34] 2025-10-12 00:19:03,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:19:34] 2025-10-12 00:19:03,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:19:34] 2025-10-12 00:19:03,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:19:34] 2025-10-12 00:19:03,271 | INFO     | aborting loop
[2025-10-11 20:19:34] 2025-10-12 00:19:03,302 | INFO     | all data control threads have been joined
[2025-10-11 20:19:34] 2025-10-12 00:19:03,810 | INFO     | all job control threads have been joined
[2025-10-11 20:19:34] 2025-10-12 00:19:04,020 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-11 20:19:34] 2025-10-12 00:19:04,271 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,275 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,276 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,307 | INFO     | [data] control thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,324 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,379 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,460 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:04,543 | INFO     | all payload control threads have been joined
[2025-10-11 20:19:34] 2025-10-12 00:19:04,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:19:34] 2025-10-12 00:19:04,816 | INFO     | [job] control thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:05,044 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:05,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:19:34] 2025-10-12 00:19:05,514 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:05,544 | INFO     | [payload] control thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:05,755 | INFO     | [job] validate thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:06,591 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:09,455 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:19:34] 2025-10-12 00:19:14,693 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:19:34] 2025-10-12 00:19:15,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140693652756288)>', '<ExcThread(monitor, started 140693355865856)>']
[2025-10-11 20:19:34] 2025-10-12 00:19:20,375 | INFO     | all workflow threads have been joined
[2025-10-11 20:19:34] 2025-10-12 00:19:20,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:19:34] 2025-10-12 00:19:20,375 | INFO     | traces error code: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:20,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | INFO     | PID=30703 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:19:34] 2025-10-12 00:19:34,168 | INFO     | [monitor] control thread has ended
[2025-10-11 20:19:34] 2025-10-12 00:19:34,224 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:19:34] 2025-10-12 00:19:34,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:19:34] 2025-10-12 00:19:34,228 [wrapper] pilotpid: 30703
[2025-10-11 20:19:34] 2025-10-12 00:19:34,230 [wrapper] Pilot exit status: 0
[2025-10-11 20:19:34] 2025-10-12 00:19:34,236 [wrapper] pandaids: 6838634729
[2025-10-11 20:19:34] 2025-10-12 00:19:34,250 [wrapper] cleanup supervisor_pilot  5572 30704
[2025-10-11 20:19:34] 2025-10-12 00:19:34,252 [wrapper] Test setup, not cleaning
[2025-10-11 20:19:34] 2025-10-12 00:19:34,254 [wrapper] apfmon messages muted
[2025-10-11 20:19:34] 2025-10-12 00:19:34,256 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:19:34] 2025-10-12 00:19:34,258 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:19:34]  *** Error codes and diagnostics ***
[2025-10-11 20:19:34]     "exeErrorCode": 0,
[2025-10-11 20:19:34]     "exeErrorDiag": "",
[2025-10-11 20:19:34]     "pilotErrorCode": 0,
[2025-10-11 20:19:34]     "pilotErrorDiag": "",
[2025-10-11 20:19:34]  *** Listing of results directory ***
[2025-10-11 20:19:34] total 406296
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:33 pilot3.tar.gz
[2025-10-11 20:19:34] -rwx------ 1 boincer umatlas     36292 Oct 11 13:36 runpilot2-wrapper.sh
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:36 queuedata.json
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas       100 Oct 11 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:19:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 18:48 run_atlas
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas       105 Oct 11 18:48 job.xml
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas 218195370 Oct 11 18:48 EVNT.46676267._002492.pool.root.1
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:48 start_atlas.sh
[2025-10-11 20:19:34] drwxrwx--x 2 boincer umatlas      4096 Oct 11 18:48 shared
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 18:48 input.tar.gz
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas         0 Oct 11 18:48 boinc_lockfile
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 18:48 pandaJob.out
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas    975520 Oct 11 18:49 agis_schedconf.cvmfs.json
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas   1560580 Oct 11 18:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:19:34] drwx------ 5 boincer umatlas      4096 Oct 11 18:49 pilot3
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas      6237 Oct 11 20:11 init_data.xml
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas 191863631 Oct 11 20:18 HITS.46676269._062024.pool.root.1
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas      1042 Oct 11 20:18 memory_monitor_summary.json
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas        95 Oct 11 20:18 pilot_heartbeat.json
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas    262553 Oct 11 20:18 log.46676269._062024.job.log.tgz.1
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas       529 Oct 11 20:18 boinc_task_state.xml
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas      7827 Oct 11 20:19 heartbeat.json
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:19 boinc_mmap_file
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas        27 Oct 11 20:19 wrapper_checkpoint.txt
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas       745 Oct 11 20:19 pilotlog.txt
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas    778776 Oct 11 20:19 log.46676269._062024.job.log.1
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas       357 Oct 11 20:19 output.list
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:19 runtime_log
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas   1064960 Oct 11 20:19 result.tar.gz
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 20:19 runtime_log.err
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas       656 Oct 11 20:19 PjrNDm4gsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq7gNDmyezTHm.diag
[2025-10-11 20:19:34] -rw-r--r-- 1 boincer umatlas     22355 Oct 11 20:19 stderr.txt
[2025-10-11 20:19:34] HITS file was successfully produced:
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas 191863631 Oct 11 20:18 shared/HITS.pool.root.1
[2025-10-11 20:19:34]  *** Contents of shared directory: ***
[2025-10-11 20:19:34] total 402072
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas 218195370 Oct 11 18:48 ATLAS.root_0
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:48 start_atlas.sh
[2025-10-11 20:19:34] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 18:48 input.tar.gz
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas 191863631 Oct 11 20:18 HITS.pool.root.1
[2025-10-11 20:19:34] -rw------- 1 boincer umatlas   1064960 Oct 11 20:19 result.tar.gz
20:19:35 (27011): run_atlas exited; CPU time 20805.362909
20:19:35 (27011): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN