Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:45 (352363): wrapper (7.7.26015): starting
13:41:45 (352363): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 13:41:45] Arguments: --nthreads 4
[2025-10-13 13:41:45] Threads: 4
[2025-10-13 13:41:45] Checking for CVMFS
[2025-10-13 13:41:45] No cvmfs_config command found, will try listing directly
[2025-10-13 13:41:45] CVMFS is ok
[2025-10-13 13:41:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:41:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:41:45] Further information can be found at the LHC@home message board.
[2025-10-13 13:41:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:41:45] Checking for apptainer binary...
[2025-10-13 13:41:45] which: no apptainer in ((null))
[2025-10-13 13:41:45] apptainer is not installed, using version from CVMFS
[2025-10-13 13:41:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:41:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 13:41:45] apptainer works
[2025-10-13 13:41:45] Set ATHENA_PROC_NUMBER=4
[2025-10-13 13:41:45] Set ATHENA_CORE_NUMBER=4
[2025-10-13 13:41:45] Starting ATLAS job with PandaID=6838453407
[2025-10-13 13:41:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:33:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:33:40] 2025-10-13 14:31:18,013 | INFO     | monitor loop #694: job 0:6838453407 is in state 'finished'
[2025-10-13 16:33:40] 2025-10-13 14:31:18,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,124 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 16:33:40] 2025-10-13 14:31:18,138 | INFO     | time since job start (10159s) is within the limit (172800.0s)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,144 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2693.918953125
[2025-10-13 16:33:40] 2025-10-13 14:31:18,168 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6838453407/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,168 | INFO     | extracted standard info from prmon json
[2025-10-13 16:33:40] 2025-10-13 14:31:18,169 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:33:40] 2025-10-13 14:31:18,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:33:40] 2025-10-13 14:31:18,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:33:40] 2025-10-13 14:31:18,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:33:40] 2025-10-13 14:31:18,172 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:33:40] 2025-10-13 14:31:18,173 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | sum of deviations: 19545517275.999992
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | mean x: 1760360785.5
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | mean y: 2314558.8554216865
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | -- intersect: -24256072806.281662
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | intersect: -24256072806.281662
[2025-10-13 16:33:40] 2025-10-13 14:31:18,174 | INFO     | chi2: 1.3960903076056022
[2025-10-13 16:33:40] 2025-10-13 14:31:18,175 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | sum of deviations: 18905424329.000004
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | mean x: 1760360633.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | mean y: 2313772.701863354
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | -- intersect: -25716372461.754074
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | intersect: -25716372461.754074
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | chi2: 1.3973101478657681
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | current chi2=1.3973101478657681 (change=-0.08737545512067109 %)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,176 | INFO     | right removable region: 160
[2025-10-13 16:33:40] 2025-10-13 14:31:18,177 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,177 | INFO     | sum of deviations: -2422833929.000001
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | mean x: 1760360938.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | mean y: 2341090.664596273
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | -- intersect: 3298332512.489168
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | intersect: 3298332512.489168
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | chi2: 0.006920969452661146
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | current chi2=0.006920969452661146 (change=99.50426061874673 %)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,178 | INFO     | sum of square deviations: 1177156955.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,179 | INFO     | sum of deviations: -2401084745.0000005
[2025-10-13 16:33:40] 2025-10-13 14:31:18,179 | INFO     | mean x: 1760361090.5
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | mean y: 2341057.012820513
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | -- intersect: 3593005956.9973054
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | intersect: 3593005956.9973054
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | chi2: 0.0067659024345779716
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | current chi2=0.0067659024345779716 (change=2.240538975700156 %)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | left removable region: 20
[2025-10-13 16:33:40] 2025-10-13 14:31:18,180 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,181 | INFO     | sum of deviations: -1108260932.0000005
[2025-10-13 16:33:40] 2025-10-13 14:31:18,181 | INFO     | mean x: 1760361212.5
[2025-10-13 16:33:40] 2025-10-13 14:31:18,181 | INFO     | mean y: 2339081.242857143
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | -- intersect: 2295335847.0968523
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | intersect: 2295335847.0968523
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | chi2: 0.005674287754943603
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | -- intersect: 2295335847.0968523
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | current memory leak: -1.30 B/s (using 140 data points, chi2=0.01)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,182 | INFO     | could have reported an average CPU frequency of 2702 MHz (9 samples)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | ..............................
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . Timing measurements:
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . get job = 0 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . initial setup = 1 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . payload setup = 8 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . stage-in = 0 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . payload execution = 10118 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . stage-out = 1 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | . log creation = 0 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,183 | INFO     | ..............................
[2025-10-13 16:33:40] 2025-10-13 14:31:18,280 | INFO     | 
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | job summary report
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | --------------------------------------------------
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | PanDA job id: 6838453407
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | task id: 46676269
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | errors: (none)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | pilot state: finished 
[2025-10-13 16:33:40] 2025-10-13 14:31:18,283 | INFO     | transexitcode: 0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | exeerrorcode: 0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | exeerrordiag: 
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | exitcode: 0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | exitmsg: OK
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | cpuconsumptiontime: 38876 s
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | nevents: 400
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | neventsw: 0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | pid: 372156
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | pgrp: 372156
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | corecount: 4
[2025-10-13 16:33:40] 2025-10-13 14:31:18,284 | INFO     | event service: False
[2025-10-13 16:33:40] 2025-10-13 14:31:18,285 | INFO     | sizes: {0: 2348867, 7: 2349129, 11: 2349157, 10131: 2378291, 10133: 2387313, 10135: 2387369, 10141: 2387755}
[2025-10-13 16:33:40] 2025-10-13 14:31:18,285 | INFO     | --------------------------------------------------
[2025-10-13 16:33:40] 2025-10-13 14:31:18,285 | INFO     | 
[2025-10-13 16:33:40] 2025-10-13 14:31:18,285 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 16:33:40] 2025-10-13 14:31:18,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | job 6838453407 has completed (purged errors)
[2025-10-13 16:33:40] 2025-10-13 14:31:18,317 | INFO     | overall cleanup function is called
[2025-10-13 16:33:40] 2025-10-13 14:31:19,327 | INFO     | --- collectZombieJob: --- 10, [372156]
[2025-10-13 16:33:40] 2025-10-13 14:31:19,328 | INFO     | zombie collector waiting for pid 372156
[2025-10-13 16:33:40] 2025-10-13 14:31:19,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:33:40] 2025-10-13 14:31:19,328 | INFO     | collected zombie processes
[2025-10-13 16:33:40] 2025-10-13 14:31:19,328 | INFO     | will attempt to kill all subprocesses of pid=372156
[2025-10-13 16:33:40] 2025-10-13 14:31:20,128 | INFO     | process IDs to be killed: [372156] (in reverse order)
[2025-10-13 16:33:40] 2025-10-13 14:31:20,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:33:40] 2025-10-13 14:31:20,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:33:40] 2025-10-13 14:31:20,407 | INFO     | did not find any defunct processes belonging to 372156
[2025-10-13 16:33:40] 2025-10-13 14:31:20,436 | INFO     | did not find any defunct processes belonging to 372156
[2025-10-13 16:33:40] 2025-10-13 14:31:20,436 | INFO     | ready for new job
[2025-10-13 16:33:40] 2025-10-13 14:31:20,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:33:40] 2025-10-13 14:31:20,439 | INFO     | ***************************************
[2025-10-13 16:33:40] 2025-10-13 14:31:20,439 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:33:40] 2025-10-13 14:31:20,439 | INFO     | ***************************************
[2025-10-13 16:33:40] 2025-10-13 14:31:20,439 | INFO     | 
[2025-10-13 16:33:40] 2025-10-13 14:31:20,447 | INFO     | architecture information:
[2025-10-13 16:33:40] 2025-10-13 14:31:20,447 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:33:40] 2025-10-13 14:31:20,469 | INFO     | cat /etc/os-release:
[2025-10-13 16:33:40] NAME="CentOS Linux"
[2025-10-13 16:33:40] VERSION="7 (Core)"
[2025-10-13 16:33:40] ID="centos"
[2025-10-13 16:33:40] ID_LIKE="rhel fedora"
[2025-10-13 16:33:40] VERSION_ID="7"
[2025-10-13 16:33:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:33:40] ANSI_COLOR="0;31"
[2025-10-13 16:33:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:33:40] HOME_URL="https://www.centos.org/"
[2025-10-13 16:33:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:33:40] 
[2025-10-13 16:33:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:33:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:33:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:33:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:33:40] 
[2025-10-13 16:33:40] 2025-10-13 14:31:20,469 | INFO     | ***************************************
[2025-10-13 16:33:40] 2025-10-13 14:31:20,972 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 16:33:40] 2025-10-13 14:31:20,994 | INFO     | sufficient remaining disk space (3339781668864 B)
[2025-10-13 16:33:40] 2025-10-13 14:31:20,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:33:40] 2025-10-13 14:31:20,995 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:33:40] 2025-10-13 14:31:20,995 | INFO     | update_server=False
[2025-10-13 16:33:40] 2025-10-13 14:31:20,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:33:40] 2025-10-13 14:31:20,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:33:40] 2025-10-13 14:31:21,127 | INFO     | all job control threads have been joined
[2025-10-13 16:33:40] 2025-10-13 14:31:21,212 | INFO     | all payload control threads have been joined
[2025-10-13 16:33:40] 2025-10-13 14:31:21,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:33:40] 2025-10-13 14:31:21,521 | INFO     | aborting loop
[2025-10-13 16:33:40] 2025-10-13 14:31:21,714 | INFO     | all data control threads have been joined
[2025-10-13 16:33:40] 2025-10-13 14:31:21,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:33:40] 2025-10-13 14:31:22,001 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,132 | INFO     | [job] control thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,217 | INFO     | [payload] control thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,330 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,526 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,555 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,663 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,719 | INFO     | [data] control thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:22,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:23,001 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:23,101 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:23,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:33:40] 2025-10-13 14:31:23,329 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:23,378 | INFO     | [job] validate thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:23,385 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:24,294 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:25,900 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:33:40] 2025-10-13 14:31:51,947 | INFO     | PID=357025 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 16:33:40] 2025-10-13 14:31:51,947 | INFO     | .. there are 11 such processes running
[2025-10-13 16:33:40] 2025-10-13 14:31:51,948 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:33:40] 2025-10-13 14:31:51,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:33:40] 2025-10-13 14:31:51,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:33:40] 2025-10-13 14:32:15,654 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:33:40] 2025-10-13 14:32:16,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22533471307584)>', '<ExcThread(monitor, started 22533229209344)>']
[2025-10-13 16:33:40] 2025-10-13 14:32:17,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:33:40] 2025-10-13 14:32:17,043 | INFO     | [monitor] control thread has ended
[2025-10-13 16:33:40] 2025-10-13 14:32:21,958 | INFO     | all workflow threads have been joined
[2025-10-13 16:33:40] 2025-10-13 14:32:21,958 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:33:40] 2025-10-13 14:32:21,959 | INFO     | traces error code: 0
[2025-10-13 16:33:40] 2025-10-13 14:32:21,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:33:40] 2025-10-13 14:32:22,100 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:33:40] 2025-10-13 14:32:22,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:33:40] 2025-10-13 14:32:22,107 [wrapper] pilotpid: 357025
[2025-10-13 16:33:40] 2025-10-13 14:32:22,112 [wrapper] Pilot exit status: 0
[2025-10-13 16:33:40] 2025-10-13 14:32:22,127 [wrapper] pandaids: 6838453407
[2025-10-13 16:33:40] 2025-10-13 14:32:22,298 [wrapper] cleanup supervisor_pilot  762589 357026
[2025-10-13 16:33:40] 2025-10-13 14:32:22,302 [wrapper] Test setup, not cleaning
[2025-10-13 16:33:40] 2025-10-13 14:32:22,305 [wrapper] apfmon messages muted
[2025-10-13 16:33:40] 2025-10-13 14:32:22,307 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:33:40] 2025-10-13 14:32:22,310 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:33:40]  *** Error codes and diagnostics ***
[2025-10-13 16:33:40]     "exeErrorCode": 0,
[2025-10-13 16:33:40]     "exeErrorDiag": "",
[2025-10-13 16:33:40]     "pilotErrorCode": 0,
[2025-10-13 16:33:40]     "pilotErrorDiag": "",
[2025-10-13 16:33:40]  *** Listing of results directory ***
[2025-10-13 16:33:40] total 419336
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-13 16:33:40] -rwx------ 1 boinc boinc     36292 Oct 11 16:21 runpilot2-wrapper.sh
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc      5112 Oct 11 16:21 queuedata.json
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:33:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:41 run_atlas
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:41 job.xml
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc      6689 Oct 13 13:41 init_data.xml
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc 220809924 Oct 13 13:41 EVNT.46676267._002382.pool.root.1
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:41 start_atlas.sh
[2025-10-13 16:33:40] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:41 shared
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc    569675 Oct 13 13:41 input.tar.gz
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:41 boinc_lockfile
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc      2549 Oct 13 13:41 pandaJob.out
[2025-10-13 16:33:40] -rw------- 1 boinc boinc    972497 Oct 13 13:41 agis_schedconf.cvmfs.json
[2025-10-13 16:33:40] -rw------- 1 boinc boinc   1560580 Oct 13 13:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:33:40] drwx------ 5 boinc boinc      4096 Oct 13 13:41 pilot3
[2025-10-13 16:33:40] -rw------- 1 boinc boinc 201186812 Oct 13 16:30 HITS.46676269._059250.pool.root.1
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc       528 Oct 13 16:30 boinc_task_state.xml
[2025-10-13 16:33:40] -rw------- 1 boinc boinc      1029 Oct 13 16:31 memory_monitor_summary.json
[2025-10-13 16:33:40] -rw------- 1 boinc boinc    330292 Oct 13 16:31 log.46676269._059250.job.log.tgz.1
[2025-10-13 16:33:40] -rw------- 1 boinc boinc      7787 Oct 13 16:31 heartbeat.json
[2025-10-13 16:33:40] -rw------- 1 boinc boinc        95 Oct 13 16:31 pilot_heartbeat.json
[2025-10-13 16:33:40] -rw------- 1 boinc boinc      4835 Oct 13 16:32 pilotlog.txt
[2025-10-13 16:33:40] -rw------- 1 boinc boinc   1417812 Oct 13 16:32 log.46676269._059250.job.log.1
[2025-10-13 16:33:40] -rw------- 1 boinc boinc       357 Oct 13 16:32 output.list
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc       620 Oct 13 16:32 runtime_log
[2025-10-13 16:33:40] -rw------- 1 boinc boinc   1771520 Oct 13 16:32 result.tar.gz
[2025-10-13 16:33:40] -rw------- 1 boinc boinc       665 Oct 13 16:32 y0DODmzepR8n9Rq4apOajLDm4fhM0noT9bVof3QYDme3RMDmTujKkn.diag
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc      9085 Oct 13 16:32 runtime_log.err
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc        26 Oct 13 16:33 wrapper_checkpoint.txt
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc      8192 Oct 13 16:33 boinc_mmap_file
[2025-10-13 16:33:40] -rw-r--r-- 1 boinc boinc     20930 Oct 13 16:33 stderr.txt
[2025-10-13 16:33:40] HITS file was successfully produced:
[2025-10-13 16:33:40] -rw------- 1 boinc boinc 201186812 Oct 13 16:30 shared/HITS.pool.root.1
[2025-10-13 16:33:40]  *** Contents of shared directory: ***
[2025-10-13 16:33:40] total 414424
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc 220809924 Oct 13 13:41 ATLAS.root_0
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:41 start_atlas.sh
[2025-10-13 16:33:40] -rw-r--r-- 2 boinc boinc    569675 Oct 13 13:41 input.tar.gz
[2025-10-13 16:33:40] -rw------- 1 boinc boinc 201186812 Oct 13 16:30 HITS.pool.root.1
[2025-10-13 16:33:40] -rw------- 1 boinc boinc   1771520 Oct 13 16:32 result.tar.gz
16:33:41 (352363): run_atlas exited; CPU time 39545.416338
16:33:41 (352363): called boinc_finish(0)

</stderr_txt>
]]>

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