Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:33:37 (3306366): wrapper (7.7.26015): starting
10:33:37 (3306366): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:33:37] Arguments: --nthreads 4
[2025-10-12 10:33:37] Threads: 4
[2025-10-12 10:33:37] Checking for CVMFS
[2025-10-12 10:33:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:33:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:33:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:33:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:33:38] 2.13.2.0 2713010 1150 49232 151617 3 57 2750264 4194305 922 130560 0 1585175 99.994 36398 72 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 10:33:38] CVMFS is ok
[2025-10-12 10:33:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:33:38] Checking for apptainer binary...
[2025-10-12 10:33:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:33:38] Running /usr/bin/apptainer --version
[2025-10-12 10:33:38] apptainer version 1.3.4
[2025-10-12 10:33:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:33:38] rubble
[2025-10-12 10:33:38] apptainer works
[2025-10-12 10:33:38] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:33:38] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:33:38] Starting ATLAS job with PandaID=6838634735
[2025-10-12 10:33:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:17:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:17:06] 2025-10-12 12:16:11,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:17:06] 2025-10-12 12:16:11,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:17:06] 2025-10-12 12:16:11,946 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:17:06] 2025-10-12 12:16:11,946 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | sum of deviations: -16913829534.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | mean x: 1760268300.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | mean y: 2407211.0198019804
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | -- intersect: 93203466351.98436
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | intersect: 93203466351.98436
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | chi2: 2.701842406966441
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | sum of deviations: -9188657804.5
[2025-10-12 12:17:06] 2025-10-12 12:16:11,947 | INFO     | mean x: 1760268147.5
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | mean y: 2432484.59375
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | -- intersect: 58966293255.81535
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | intersect: 58966293255.81535
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | chi2: 1.9578448312786358
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | current chi2=1.9578448312786358 (change=27.536675483717293 %)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | sum of deviations: -7740576456.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | mean x: 1760267995.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,948 | INFO     | mean y: 2437919.3626373624
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | -- intersect: 58320346979.76292
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | intersect: 58320346979.76292
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | chi2: 1.9587142350452036
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | current chi2=1.9587142350452036 (change=-0.044406162974618954 %)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | right removable region: 90
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | sum of deviations: -32349863247.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | mean x: 1760268452.5
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | mean y: 2458182.5416666665
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | -- intersect: 207592424372.81903
[2025-10-12 12:17:06] 2025-10-12 12:16:11,949 | INFO     | intersect: 207592424372.81903
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | chi2: 0.987206295638501
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | current chi2=0.987206295638501 (change=63.46173658785263 %)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | sum of deviations: -28599075849.00002
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | mean x: 1760268605.0
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | mean y: 2444079.2197802197
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | -- intersect: 215469456390.71988
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | intersect: 215469456390.71988
[2025-10-12 12:17:06] 2025-10-12 12:16:11,950 | INFO     | chi2: 0.9890249087144876
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | current chi2=0.9890249087144876 (change=-0.18421814002009423 %)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | left removable region: 20
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | sum of deviations: -12482696935.999998
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | mean x: 1760268574.5
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | mean y: 2447491.314285714
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | -- intersect: 206637244920.34576
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | intersect: 206637244920.34576
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | chi2: 0.15618256710401485
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | -- intersect: 206637244920.34576
[2025-10-12 12:17:06] 2025-10-12 12:16:11,951 | INFO     | current memory leak: -117.39 B/s (using 70 data points, chi2=0.16)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | could have reported an average CPU frequency of 4005 MHz (7 samples)
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | ..............................
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . Timing measurements:
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . get job = 0 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . initial setup = 5 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . payload setup = 3 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . stage-in = 0 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . payload execution = 6109 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . stage-out = 0 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | . log creation = 0 s
[2025-10-12 12:17:06] 2025-10-12 12:16:11,952 | INFO     | ..............................
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | 
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | job summary report
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | --------------------------------------------------
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | PanDA job id: 6838634735
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | task id: 46676269
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | errors: (none)
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | pilot state: finished 
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | transexitcode: 0
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | exeerrorcode: 0
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | exeerrordiag: 
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | exitcode: 0
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | exitmsg: OK
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | cpuconsumptiontime: 22698 s
[2025-10-12 12:17:06] 2025-10-12 12:16:12,018 | INFO     | nevents: 400
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | neventsw: 0
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | pid: 3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | pgrp: 3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | corecount: 4
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | event service: False
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | sizes: {0: 2348029, 1: 2348892, 4: 2349154, 11: 2349182, 6117: 2376066, 6119: 2385078, 6121: 2385262, 6129: 2385456}
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | --------------------------------------------------
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | 
[2025-10-12 12:17:06] 2025-10-12 12:16:12,019 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | job 6838634735 has completed (purged errors)
[2025-10-12 12:17:06] 2025-10-12 12:16:12,038 | INFO     | overall cleanup function is called
[2025-10-12 12:17:06] 2025-10-12 12:16:13,045 | INFO     | --- collectZombieJob: --- 10, [3316520]
[2025-10-12 12:17:06] 2025-10-12 12:16:13,046 | INFO     | zombie collector waiting for pid 3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:13,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:17:06] 2025-10-12 12:16:13,046 | INFO     | collected zombie processes
[2025-10-12 12:17:06] 2025-10-12 12:16:13,046 | INFO     | will attempt to kill all subprocesses of pid=3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:13,102 | INFO     | process IDs to be killed: [3316520] (in reverse order)
[2025-10-12 12:17:06] 2025-10-12 12:16:13,138 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:17:06] 2025-10-12 12:16:13,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:17:06] 2025-10-12 12:16:13,141 | INFO     | did not find any defunct processes belonging to 3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:13,142 | INFO     | did not find any defunct processes belonging to 3316520
[2025-10-12 12:17:06] 2025-10-12 12:16:13,142 | INFO     | ready for new job
[2025-10-12 12:17:06] 2025-10-12 12:16:13,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:17:06] 2025-10-12 12:16:13,144 | INFO     | ***************************************
[2025-10-12 12:17:06] 2025-10-12 12:16:13,144 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:17:06] 2025-10-12 12:16:13,144 | INFO     | ***************************************
[2025-10-12 12:17:06] 2025-10-12 12:16:13,144 | INFO     | 
[2025-10-12 12:17:06] 2025-10-12 12:16:13,144 | INFO     | architecture information:
[2025-10-12 12:17:06] 2025-10-12 12:16:13,145 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:17:06] 2025-10-12 12:16:13,158 | INFO     | cat /etc/os-release:
[2025-10-12 12:17:06] NAME="CentOS Linux"
[2025-10-12 12:17:06] VERSION="7 (Core)"
[2025-10-12 12:17:06] ID="centos"
[2025-10-12 12:17:06] ID_LIKE="rhel fedora"
[2025-10-12 12:17:06] VERSION_ID="7"
[2025-10-12 12:17:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:17:06] ANSI_COLOR="0;31"
[2025-10-12 12:17:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:17:06] HOME_URL="https://www.centos.org/"
[2025-10-12 12:17:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:17:06] 
[2025-10-12 12:17:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:17:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:17:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:17:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:17:06] 
[2025-10-12 12:17:06] 2025-10-12 12:16:13,159 | INFO     | ***************************************
[2025-10-12 12:17:06] 2025-10-12 12:16:13,661 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 12:17:06] 2025-10-12 12:16:13,676 | INFO     | sufficient remaining disk space (260258660352 B)
[2025-10-12 12:17:06] 2025-10-12 12:16:13,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:17:06] 2025-10-12 12:16:13,676 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:17:06] 2025-10-12 12:16:13,676 | INFO     | update_server=False
[2025-10-12 12:17:06] 2025-10-12 12:16:13,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:17:06] 2025-10-12 12:16:13,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:17:06] 2025-10-12 12:16:13,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:17:06] 2025-10-12 12:16:13,677 | INFO     | aborting loop
[2025-10-12 12:17:06] 2025-10-12 12:16:13,686 | INFO     | all data control threads have been joined
[2025-10-12 12:17:06] 2025-10-12 12:16:13,964 | INFO     | all job control threads have been joined
[2025-10-12 12:17:06] 2025-10-12 12:16:14,146 | INFO     | all payload control threads have been joined
[2025-10-12 12:17:06] 2025-10-12 12:16:14,681 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:14,682 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:14,682 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:14,692 | INFO     | [data] control thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:14,969 | INFO     | [job] control thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:17:06] 2025-10-12 12:16:15,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:17:06] 2025-10-12 12:16:15,151 | INFO     | [payload] control thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,382 | INFO     | [job] validate thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,478 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,487 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,626 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,664 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:15,960 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:16,179 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:17,084 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:19,108 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:24,426 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:17:06] 2025-10-12 12:16:25,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:17:06] 2025-10-12 12:16:44,060 | INFO     | PID=3310092 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:17:06] 2025-10-12 12:16:44,060 | INFO     | .. there are 2 such processes running
[2025-10-12 12:17:06] 2025-10-12 12:16:44,060 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:17:06] 2025-10-12 12:16:44,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:17:06] 2025-10-12 12:16:44,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:17:06] 2025-10-12 12:16:58,826 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:17:06] 2025-10-12 12:17:00,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139418993268544)>', '<ExcThread(monitor, started 139418497169152)>']
[2025-10-12 12:17:06] 2025-10-12 12:17:01,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:17:06] 2025-10-12 12:17:01,142 | INFO     | [monitor] control thread has ended
[2025-10-12 12:17:06] 2025-10-12 12:17:05,954 | INFO     | all workflow threads have been joined
[2025-10-12 12:17:06] 2025-10-12 12:17:05,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:17:06] 2025-10-12 12:17:05,954 | INFO     | traces error code: 0
[2025-10-12 12:17:06] 2025-10-12 12:17:05,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:17:06] 2025-10-12 12:17:06,034 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:17:06] 2025-10-12 12:17:06,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:17:06] 2025-10-12 12:17:06,038 [wrapper] pilotpid: 3310092
[2025-10-12 12:17:06] 2025-10-12 12:17:06,043 [wrapper] Pilot exit status: 0
[2025-10-12 12:17:06] 2025-10-12 12:17:06,049 [wrapper] pandaids: 6838634735
[2025-10-12 12:17:06] 2025-10-12 12:17:06,071 [wrapper] cleanup supervisor_pilot 3354830 3310093
[2025-10-12 12:17:06] 2025-10-12 12:17:06,073 [wrapper] Test setup, not cleaning
[2025-10-12 12:17:06] 2025-10-12 12:17:06,075 [wrapper] apfmon messages muted
[2025-10-12 12:17:06] 2025-10-12 12:17:06,078 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:17:06] 2025-10-12 12:17:06,081 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:17:06]  *** Error codes and diagnostics ***
[2025-10-12 12:17:06]     "exeErrorCode": 0,
[2025-10-12 12:17:06]     "exeErrorDiag": "",
[2025-10-12 12:17:06]     "pilotErrorCode": 0,
[2025-10-12 12:17:06]     "pilotErrorDiag": "",
[2025-10-12 12:17:06]  *** Listing of results directory ***
[2025-10-12 12:17:06] total 403756
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:33 pilot3.tar.gz
[2025-10-12 12:17:06] -rwx------ 1 boinc boinc     36292 Oct 11 17:36 runpilot2-wrapper.sh
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:36 queuedata.json
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:17:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:33 run_atlas
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:33 job.xml
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc 218195370 Oct 12 10:33 EVNT.46676267._002492.pool.root.1
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc      9731 Oct 12 10:33 init_data.xml
[2025-10-12 12:17:06] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:33 shared
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc    569672 Oct 12 10:33 input.tar.gz
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:33 start_atlas.sh
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:33 boinc_lockfile
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:33 pandaJob.out
[2025-10-12 12:17:06] -rw------- 1 boinc boinc    975520 Oct 12 10:33 agis_schedconf.cvmfs.json
[2025-10-12 12:17:06] -rw------- 1 boinc boinc   1560580 Oct 12 10:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:17:06] drwx------ 5 boinc boinc      4096 Oct 12 10:33 pilot3
[2025-10-12 12:17:06] -rw------- 1 boinc boinc 189061231 Oct 12 12:15 HITS.46676269._062030.pool.root.1
[2025-10-12 12:17:06] -rw------- 1 boinc boinc        96 Oct 12 12:15 pilot_heartbeat.json
[2025-10-12 12:17:06] -rw------- 1 boinc boinc      1013 Oct 12 12:15 memory_monitor_summary.json
[2025-10-12 12:17:06] -rw------- 1 boinc boinc    277607 Oct 12 12:16 log.46676269._062030.job.log.tgz.1
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc       529 Oct 12 12:16 boinc_task_state.xml
[2025-10-12 12:17:06] -rw------- 1 boinc boinc      7741 Oct 12 12:16 heartbeat.json
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:17 wrapper_checkpoint.txt
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:17 boinc_mmap_file
[2025-10-12 12:17:06] -rw------- 1 boinc boinc      4903 Oct 12 12:17 pilotlog.txt
[2025-10-12 12:17:06] -rw------- 1 boinc boinc    861032 Oct 12 12:17 log.46676269._062030.job.log.1
[2025-10-12 12:17:06] -rw------- 1 boinc boinc       357 Oct 12 12:17 output.list
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:17 runtime_log
[2025-10-12 12:17:06] -rw------- 1 boinc boinc   1157120 Oct 12 12:17 result.tar.gz
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc      8756 Oct 12 12:17 runtime_log.err
[2025-10-12 12:17:06] -rw------- 1 boinc boinc       643 Oct 12 12:17 LtKODm4gsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw7gNDmPvGw1m.diag
[2025-10-12 12:17:06] -rw-r--r-- 1 boinc boinc     20577 Oct 12 12:17 stderr.txt
[2025-10-12 12:17:06] HITS file was successfully produced:
[2025-10-12 12:17:06] -rw------- 1 boinc boinc 189061231 Oct 12 12:15 shared/HITS.pool.root.1
[2025-10-12 12:17:06]  *** Contents of shared directory: ***
[2025-10-12 12:17:06] total 399432
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc 218195370 Oct 12 10:33 ATLAS.root_0
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc    569672 Oct 12 10:33 input.tar.gz
[2025-10-12 12:17:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:33 start_atlas.sh
[2025-10-12 12:17:06] -rw------- 1 boinc boinc 189061231 Oct 12 12:15 HITS.pool.root.1
[2025-10-12 12:17:06] -rw------- 1 boinc boinc   1157120 Oct 12 12:17 result.tar.gz
12:17:07 (3306366): run_atlas exited; CPU time 22709.049568
12:17:07 (3306366): called boinc_finish(0)

</stderr_txt>
]]>

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