Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:05:27 (2156638): wrapper (7.7.26015): starting
10:05:27 (2156638): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 10:05:27] Arguments: --nthreads 2
[2025-10-12 10:05:27] Threads: 2
[2025-10-12 10:05:27] Checking for CVMFS
[2025-10-12 10:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:05:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:05:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:05:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:05:27] 2.9.2.0 1210534 4051 58296 151612 3 57 28084755 36864000 0 130560 0 2492634 99.989 134299 920 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 10:05:27] CVMFS is ok
[2025-10-12 10:05:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:05:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:05:27] Further information can be found at the LHC@home message board.
[2025-10-12 10:05:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:05:27] Checking for apptainer binary...
[2025-10-12 10:05:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:05:27] Running /usr/bin/apptainer --version
[2025-10-12 10:05:27] apptainer version 1.4.1-1.1
[2025-10-12 10:05:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:05:27] thA369
[2025-10-12 10:05:27] apptainer works
[2025-10-12 10:05:27] Set ATHENA_PROC_NUMBER=2
[2025-10-12 10:05:27] Set ATHENA_CORE_NUMBER=2
[2025-10-12 10:05:27] Starting ATLAS job with PandaID=6838634409
[2025-10-12 10:05:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:09:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:09:09] 2025-10-12 10:08:41,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:09:09] 2025-10-12 10:08:41,381 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,407 | INFO     | [job] validate thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,408 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,409 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,432 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,512 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,564 | INFO     | [data] control thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:41,916 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:45,291 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:09:09] 2025-10-12 10:08:50,192 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:09:09] 2025-10-12 10:08:51,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486938814272)>', '<ExcThread(monitor, started 140486366983936)>']
[2025-10-12 12:09:09] 2025-10-12 10:08:56,624 | INFO     | all workflow threads have been joined
[2025-10-12 12:09:09] 2025-10-12 10:08:56,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:09:09] 2025-10-12 10:08:56,625 | INFO     | traces error code: 0
[2025-10-12 12:09:09] 2025-10-12 10:08:56,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | INFO     | PID=2160343 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:09:09] 2025-10-12 10:09:09,075 | INFO     | [monitor] control thread has ended
[2025-10-12 12:09:09] 2025-10-12 10:09:09,113 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:09:09] 2025-10-12 10:09:09,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:09:09] 2025-10-12 10:09:09,119 [wrapper] pilotpid: 2160343
[2025-10-12 12:09:09] 2025-10-12 10:09:09,121 [wrapper] Pilot exit status: 0
[2025-10-12 12:09:09] 2025-10-12 10:09:09,127 [wrapper] pandaids: 6838634409
[2025-10-12 12:09:09] 2025-10-12 10:09:09,140 [wrapper] cleanup supervisor_pilot 2182383 2160344
[2025-10-12 12:09:09] 2025-10-12 10:09:09,143 [wrapper] Test setup, not cleaning
[2025-10-12 12:09:09] 2025-10-12 10:09:09,145 [wrapper] apfmon messages muted
[2025-10-12 12:09:09] 2025-10-12 10:09:09,147 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:09:09] 2025-10-12 10:09:09,149 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:09:09]  *** Error codes and diagnostics ***
[2025-10-12 12:09:09]     "exeErrorCode": 0,
[2025-10-12 12:09:09]     "exeErrorDiag": "",
[2025-10-12 12:09:09]     "pilotErrorCode": 0,
[2025-10-12 12:09:09]     "pilotErrorDiag": "",
[2025-10-12 12:09:09]  *** Listing of results directory ***
[2025-10-12 12:09:09] total 411900
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:18 pilot3.tar.gz
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:21 queuedata.json
[2025-10-12 12:09:09] -rwx------ 1 boinc boinc     36292 Oct 11 19:21 runpilot2-wrapper.sh
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:09:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:05 run_atlas
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:05 job.xml
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 10:05 EVNT.46676267._002481.pool.root.1
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc    569678 Oct 12 10:05 input.tar.gz
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:05 start_atlas.sh
[2025-10-12 12:09:09] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:05 shared
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:05 boinc_setup_complete
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      6206 Oct 12 10:05 init_data.xml
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:05 boinc_lockfile
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:05 pandaJob.out
[2025-10-12 12:09:09] -rw------- 1 boinc boinc    975520 Oct 12 10:05 agis_schedconf.cvmfs.json
[2025-10-12 12:09:09] -rw------- 1 boinc boinc   1560580 Oct 12 10:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:09:09] drwx------ 5 boinc boinc      4096 Oct 12 10:05 pilot3
[2025-10-12 12:09:09] -rw------- 1 boinc boinc 192479950 Oct 12 12:08 HITS.46676269._061759.pool.root.1
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc       529 Oct 12 12:08 boinc_task_state.xml
[2025-10-12 12:09:09] -rw------- 1 boinc boinc      1017 Oct 12 12:08 memory_monitor_summary.json
[2025-10-12 12:09:09] -rw------- 1 boinc boinc    273884 Oct 12 12:08 log.46676269._061759.job.log.tgz.1
[2025-10-12 12:09:09] -rw------- 1 boinc boinc      7751 Oct 12 12:08 heartbeat.json
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc        27 Oct 12 12:09 wrapper_checkpoint.txt
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:09 boinc_mmap_file
[2025-10-12 12:09:09] -rw------- 1 boinc boinc       747 Oct 12 12:09 pilotlog.txt
[2025-10-12 12:09:09] -rw------- 1 boinc boinc        95 Oct 12 12:09 pilot_heartbeat.json
[2025-10-12 12:09:09] -rw------- 1 boinc boinc   1061345 Oct 12 12:09 log.46676269._061759.job.log.1
[2025-10-12 12:09:09] -rw------- 1 boinc boinc       357 Oct 12 12:09 output.list
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:09 runtime_log
[2025-10-12 12:09:09] -rw------- 1 boinc boinc   1351680 Oct 12 12:09 result.tar.gz
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      8777 Oct 12 12:09 runtime_log.err
[2025-10-12 12:09:09] -rw------- 1 boinc boinc       659 Oct 12 12:09 kY7NDm4SsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm13gNDmNTazyn.diag
[2025-10-12 12:09:09] -rw-r--r-- 1 boinc boinc      5740 Oct 12 12:09 stderr.txt
[2025-10-12 12:09:09] HITS file was successfully produced:
[2025-10-12 12:09:09] -rw------- 1 boinc boinc 192479950 Oct 12 12:08 shared/HITS.pool.root.1
[2025-10-12 12:09:09]  *** Contents of shared directory: ***
[2025-10-12 12:09:09] total 407408
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 10:05 ATLAS.root_0
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc    569678 Oct 12 10:05 input.tar.gz
[2025-10-12 12:09:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:05 start_atlas.sh
[2025-10-12 12:09:09] -rw------- 1 boinc boinc 192479950 Oct 12 12:08 HITS.pool.root.1
[2025-10-12 12:09:09] -rw------- 1 boinc boinc   1351680 Oct 12 12:09 result.tar.gz
12:09:10 (2156638): run_atlas exited; CPU time 14339.813504
12:09:10 (2156638): called boinc_finish(0)

</stderr_txt>
]]>

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