Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:15:15 (2839432): wrapper (7.7.26015): starting
21:15:15 (2839432): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:15:15] Arguments: --nthreads 8
[2025-10-11 21:15:15] Threads: 8
[2025-10-11 21:15:15] Checking for CVMFS
[2025-10-11 21:15:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:15:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:15:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:15:17] 2.13.2.0 3608313 128571 231632 151601 0 401 20221485 32935936 32769 16776704 0 181234200 99.616 196497354 29374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:15:17] CVMFS is ok
[2025-10-11 21:15:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:15:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:15:17] Further information can be found at the LHC@home message board.
[2025-10-11 21:15:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:15:17] Checking for apptainer binary...
[2025-10-11 21:15:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:15:17] Running /usr/bin/apptainer --version
[2025-10-11 21:15:17] apptainer version 1.4.3-1.el9
[2025-10-11 21:15:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:15:18] c6-6-39-3.aglt2.org
[2025-10-11 21:15:18] apptainer works
[2025-10-11 21:15:18] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:15:18] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:15:18] Starting ATLAS job with PandaID=6838454839
[2025-10-11 21:15:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:17:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:17:53] 2025-10-12 11:16:54,411 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:17:53] 2025-10-12 11:16:54,412 | INFO     | sum of square deviations: 63040171636.03407
[2025-10-12 07:17:53] 2025-10-12 11:16:54,452 | INFO     | monitor loop #2062: job 0:6838454839 is in state 'finished'
[2025-10-12 07:17:53] 2025-10-12 11:16:54,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,490 | INFO     | sum of deviations: -153270966758.2789
[2025-10-12 07:17:53] 2025-10-12 11:16:54,491 | INFO     | mean x: 1760249828.6088436
[2025-10-12 07:17:53] 2025-10-12 11:16:54,491 | INFO     | mean y: 2093935.7074829931
[2025-10-12 07:17:53] 2025-10-12 11:16:54,491 | INFO     | -- intersect: 4281828364.805324
[2025-10-12 07:17:53] 2025-10-12 11:16:54,491 | INFO     | intersect: 4281828364.805324
[2025-10-12 07:17:53] 2025-10-12 11:16:54,492 | INFO     | chi2: 5.070980391257235
[2025-10-12 07:17:53] 2025-10-12 11:16:54,519 | INFO     | sum of square deviations: 61445866174.83336
[2025-10-12 07:17:53] 2025-10-12 11:16:54,617 | INFO     | time since job start (36015s) is within the limit (172800.0s)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,618 | INFO     | sum of deviations: -32334861202.087406
[2025-10-12 07:17:53] 2025-10-12 11:16:54,618 | INFO     | mean x: 1760249676.1183534
[2025-10-12 07:17:53] 2025-10-12 11:16:54,618 | INFO     | mean y: 2105481.783876501
[2025-10-12 07:17:53] 2025-10-12 11:16:54,619 | INFO     | -- intersect: 928407485.5078988
[2025-10-12 07:17:53] 2025-10-12 11:16:54,619 | INFO     | intersect: 928407485.5078988
[2025-10-12 07:17:53] 2025-10-12 11:16:54,619 | INFO     | chi2: 2.374420787583517
[2025-10-12 07:17:53] 2025-10-12 11:16:54,619 | INFO     | current chi2=2.374420787583517 (change=53.17629719733874 %)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,620 | INFO     | sum of square deviations: 59878570937.77857
[2025-10-12 07:17:53] 2025-10-12 11:16:54,635 | INFO     | sum of deviations: -8711950253.5052
[2025-10-12 07:17:53] 2025-10-12 11:16:54,636 | INFO     | mean x: 1760249523.6228373
[2025-10-12 07:17:53] 2025-10-12 11:16:54,636 | INFO     | mean y: 2107779.2958477507
[2025-10-12 07:17:53] 2025-10-12 11:16:54,636 | INFO     | -- intersect: 258212860.68621036
[2025-10-12 07:17:53] 2025-10-12 11:16:54,636 | INFO     | intersect: 258212860.68621036
[2025-10-12 07:17:53] 2025-10-12 11:16:54,647 | INFO     | chi2: 2.2914858584999
[2025-10-12 07:17:53] 2025-10-12 11:16:54,647 | INFO     | current chi2=2.2914858584999 (change=3.492848846224139 %)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,647 | INFO     | right removable region: 577
[2025-10-12 07:17:53] 2025-10-12 11:16:54,648 | INFO     | sum of square deviations: 61445468454.83336
[2025-10-12 07:17:53] 2025-10-12 11:16:54,716 | INFO     | sum of deviations: -245567951513.83875
[2025-10-12 07:17:53] 2025-10-12 11:16:54,716 | INFO     | mean x: 1760249981.1183534
[2025-10-12 07:17:53] 2025-10-12 11:16:54,716 | INFO     | mean y: 2102737.7512864494
[2025-10-12 07:17:53] 2025-10-12 11:16:54,716 | INFO     | -- intersect: 7036974354.577658
[2025-10-12 07:17:53] 2025-10-12 11:16:54,716 | INFO     | intersect: 7036974354.577658
[2025-10-12 07:17:53] 2025-10-12 11:16:54,717 | INFO     | chi2: 3.3783838978496687
[2025-10-12 07:17:53] 2025-10-12 11:16:54,751 | INFO     | current chi2=3.3783838978496687 (change=33.37809186416367 %)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,770 | INFO     | sum of square deviations: 59877917381.28032
[2025-10-12 07:17:53] 2025-10-12 11:16:54,839 | INFO     | sum of deviations: -262312534698.08972
[2025-10-12 07:17:53] 2025-10-12 11:16:54,840 | INFO     | mean x: 1760250133.6262975
[2025-10-12 07:17:53] 2025-10-12 11:16:54,840 | INFO     | mean y: 2104364.4532871973
[2025-10-12 07:17:53] 2025-10-12 11:16:54,840 | INFO     | -- intersect: 7713389166.060599
[2025-10-12 07:17:53] 2025-10-12 11:16:54,840 | INFO     | intersect: 7713389166.060599
[2025-10-12 07:17:53] 2025-10-12 11:16:54,841 | INFO     | chi2: 3.293700136920125
[2025-10-12 07:17:53] 2025-10-12 11:16:54,841 | INFO     | current chi2=3.293700136920125 (change=2.5066352282653503 %)
[2025-10-12 07:17:53] 2025-10-12 11:16:54,842 | INFO     | left removable region: 20
[2025-10-12 07:17:53] 2025-10-12 11:16:54,885 | INFO     | sum of square deviations: 53585797160.09703
[2025-10-12 07:17:53] 2025-10-12 11:16:54,972 | INFO     | sum of deviations: -91902903189.84193
[2025-10-12 07:17:53] 2025-10-12 11:16:54,972 | INFO     | mean x: 1760250103.1579893
[2025-10-12 07:17:53] 2025-10-12 11:16:54,972 | INFO     | mean y: 2116496.998204668
[2025-10-12 07:17:53] 2025-10-12 11:16:54,972 | INFO     | -- intersect: 3021052547.1070657
[2025-10-12 07:17:53] 2025-10-12 11:16:54,972 | INFO     | intersect: 3021052547.1070657
[2025-10-12 07:17:53] 2025-10-12 11:16:54,973 | INFO     | chi2: 0.4592108952007943
[2025-10-12 07:17:53] 2025-10-12 11:16:54,974 | INFO     | -- intersect: 3021052547.1070657
[2025-10-12 07:17:53] 2025-10-12 11:16:54,974 | INFO     | current memory leak: -1.72 B/s (using 557 data points, chi2=0.46)
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | could have reported an average CPU frequency of 3011 MHz (23 samples)
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | ..............................
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . Timing measurements:
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . get job = 0 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . initial setup = 5 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . payload setup = 31 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . stage-in = 0 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . payload execution = 35858 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . stage-out = 6 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | . log creation = 1 s
[2025-10-12 07:17:53] 2025-10-12 11:16:55,015 | INFO     | ..............................
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | 
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | job summary report
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | --------------------------------------------------
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | PanDA job id: 6838454839
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | task id: 46676269
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | errors: (none)
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | pilot state: finished 
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | transexitcode: 0
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | exeerrorcode: 0
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | exeerrordiag: 
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | exitcode: 0
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | exitmsg: OK
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | cpuconsumptiontime: 42830 s
[2025-10-12 07:17:53] 2025-10-12 11:16:56,311 | INFO     | nevents: 400
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | neventsw: 0
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | pid: 2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | pgrp: 2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | corecount: 8
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | event service: False
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | sizes: {0: 2348628, 1: 2348712, 2: 2348911, 13: 2348911, 24: 2348967, 31: 2349257, 35: 2349413, 35894: 2389660, 35896: 2389659, 35904: 2398797, 35955: 2398935}
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | --------------------------------------------------
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | 
[2025-10-12 07:17:53] 2025-10-12 11:16:56,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:17:53] 2025-10-12 11:16:56,533 | INFO     | job 6838454839 has completed (purged errors)
[2025-10-12 07:17:53] 2025-10-12 11:16:56,534 | INFO     | overall cleanup function is called
[2025-10-12 07:17:53] 2025-10-12 11:16:57,541 | INFO     | --- collectZombieJob: --- 10, [2855571]
[2025-10-12 07:17:53] 2025-10-12 11:16:57,542 | INFO     | zombie collector waiting for pid 2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:57,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:17:53] 2025-10-12 11:16:57,542 | INFO     | collected zombie processes
[2025-10-12 07:17:53] 2025-10-12 11:16:57,542 | INFO     | will attempt to kill all subprocesses of pid=2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:59,251 | INFO     | process IDs to be killed: [2855571] (in reverse order)
[2025-10-12 07:17:53] 2025-10-12 11:16:59,382 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:17:53] 2025-10-12 11:16:59,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:17:53] 2025-10-12 11:16:59,443 | INFO     | did not find any defunct processes belonging to 2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:59,476 | INFO     | did not find any defunct processes belonging to 2855571
[2025-10-12 07:17:53] 2025-10-12 11:16:59,477 | INFO     | ready for new job
[2025-10-12 07:17:53] 2025-10-12 11:16:59,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:17:53] 2025-10-12 11:16:59,480 | INFO     | ***************************************
[2025-10-12 07:17:53] 2025-10-12 11:16:59,480 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:17:53] 2025-10-12 11:16:59,480 | INFO     | ***************************************
[2025-10-12 07:17:53] 2025-10-12 11:16:59,480 | INFO     | 
[2025-10-12 07:17:53] 2025-10-12 11:16:59,483 | INFO     | architecture information:
[2025-10-12 07:17:53] 2025-10-12 11:16:59,483 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:17:53] 2025-10-12 11:16:59,553 | INFO     | cat /etc/os-release:
[2025-10-12 07:17:53] NAME="CentOS Linux"
[2025-10-12 07:17:53] VERSION="7 (Core)"
[2025-10-12 07:17:53] ID="centos"
[2025-10-12 07:17:53] ID_LIKE="rhel fedora"
[2025-10-12 07:17:53] VERSION_ID="7"
[2025-10-12 07:17:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:17:53] ANSI_COLOR="0;31"
[2025-10-12 07:17:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:17:53] HOME_URL="https://www.centos.org/"
[2025-10-12 07:17:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:17:53] 
[2025-10-12 07:17:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:17:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:17:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:17:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:17:53] 
[2025-10-12 07:17:53] 2025-10-12 11:16:59,553 | INFO     | ***************************************
[2025-10-12 07:17:53] 2025-10-12 11:17:00,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 07:17:53] 2025-10-12 11:17:00,157 | INFO     | sufficient remaining disk space (73080504320 B)
[2025-10-12 07:17:53] 2025-10-12 11:17:00,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:17:53] 2025-10-12 11:17:00,157 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:17:53] 2025-10-12 11:17:00,157 | INFO     | update_server=False
[2025-10-12 07:17:53] 2025-10-12 11:17:00,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:17:53] 2025-10-12 11:17:00,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:17:53] 2025-10-12 11:17:00,574 | INFO     | aborting loop
[2025-10-12 07:17:53] 2025-10-12 11:17:00,699 | INFO     | all data control threads have been joined
[2025-10-12 07:17:53] 2025-10-12 11:17:00,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:17:53] 2025-10-12 11:17:00,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:17:53] 2025-10-12 11:17:01,022 | INFO     | all payload control threads have been joined
[2025-10-12 07:17:53] 2025-10-12 11:17:01,164 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:17:53] 2025-10-12 11:17:01,397 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,404 | INFO     | [job] validate thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,447 | INFO     | all job control threads have been joined
[2025-10-12 07:17:53] 2025-10-12 11:17:01,581 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,603 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,705 | INFO     | [data] control thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,914 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,918 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:01,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,030 | INFO     | [payload] control thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,321 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,403 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,411 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,457 | INFO     | [job] control thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:02,794 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:05,222 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:17:53] 2025-10-12 11:17:29,562 | INFO     | PID=2845458 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:17:53] 2025-10-12 11:17:29,562 | INFO     | .. there are 47 such processes running
[2025-10-12 07:17:53] 2025-10-12 11:17:29,563 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:17:53] 2025-10-12 11:17:29,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:17:53] 2025-10-12 11:17:29,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:17:53] 2025-10-12 11:17:45,193 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:17:53] 2025-10-12 11:17:46,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387056228160)>', '<ExcThread(monitor, started 140386391529216)>']
[2025-10-12 07:17:53] 2025-10-12 11:17:46,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:17:53] 2025-10-12 11:17:46,737 | INFO     | [monitor] control thread has ended
[2025-10-12 07:17:53] 2025-10-12 11:17:51,055 | INFO     | all workflow threads have been joined
[2025-10-12 07:17:53] 2025-10-12 11:17:51,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:17:53] 2025-10-12 11:17:51,056 | INFO     | traces error code: 0
[2025-10-12 07:17:53] 2025-10-12 11:17:51,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:17:53] 2025-10-12 11:17:52,456 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:17:53] 2025-10-12 11:17:52,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:17:53] 2025-10-12 11:17:52,552 [wrapper] pilotpid: 2845458
[2025-10-12 07:17:53] 2025-10-12 11:17:52,565 [wrapper] Pilot exit status: 0
[2025-10-12 07:17:53] 2025-10-12 11:17:52,630 [wrapper] pandaids: 6838454839
[2025-10-12 07:17:53] 2025-10-12 11:17:52,733 [wrapper] cleanup supervisor_pilot 1023968 2845459
[2025-10-12 07:17:53] 2025-10-12 11:17:52,737 [wrapper] Test setup, not cleaning
[2025-10-12 07:17:53] 2025-10-12 11:17:52,752 [wrapper] apfmon messages muted
[2025-10-12 07:17:53] 2025-10-12 11:17:52,768 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:17:53] 2025-10-12 11:17:52,805 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:17:53]  *** Error codes and diagnostics ***
[2025-10-12 07:17:53]     "exeErrorCode": 0,
[2025-10-12 07:17:53]     "exeErrorDiag": "",
[2025-10-12 07:17:53]     "pilotErrorCode": 0,
[2025-10-12 07:17:53]     "pilotErrorDiag": "",
[2025-10-12 07:17:53]  *** Listing of results directory ***
[2025-10-12 07:17:53] total 422628
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 10:50 queuedata.json
[2025-10-12 07:17:53] -rwx------. 1 boincer umatlas     36292 Oct 11 10:50 runpilot2-wrapper.sh
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:17:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:15 run_atlas
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:15 job.xml
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas 219581804 Oct 11 21:15 EVNT.46676267._002403.pool.root.1
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 21:15 input.tar.gz
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:15 start_atlas.sh
[2025-10-12 07:17:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:15 shared
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:15 boinc_lockfile
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:15 pandaJob.out
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas    975496 Oct 11 21:16 agis_schedconf.cvmfs.json
[2025-10-12 07:17:53] drwx------. 5 boincer umatlas      4096 Oct 11 21:16 pilot3
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 07:01 init_data.xml
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas 199202342 Oct 12 07:11 HITS.46676269._059525.pool.root.1
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:11 boinc_task_state.xml
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas      1052 Oct 12 07:15 memory_monitor_summary.json
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas    714253 Oct 12 07:16 log.46676269._059525.job.log.tgz.1
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas      7838 Oct 12 07:16 heartbeat.json
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas        95 Oct 12 07:17 pilot_heartbeat.json
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:17 wrapper_checkpoint.txt
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:17 boinc_mmap_file
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas      4824 Oct 12 07:17 pilotlog.txt
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas   4329497 Oct 12 07:17 log.46676269._059525.job.log.1
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas       357 Oct 12 07:17 output.list
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:17 runtime_log
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas   5058560 Oct 12 07:17 result.tar.gz
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 07:17 runtime_log.err
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas       662 Oct 12 07:17 IbpKDmx6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmN5RMDm7FPUEn.diag
[2025-10-12 07:17:53] -rw-r--r--. 1 boincer umatlas     21092 Oct 12 07:17 stderr.txt
[2025-10-12 07:17:53] HITS file was successfully produced:
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas 199202342 Oct 12 07:11 shared/HITS.pool.root.1
[2025-10-12 07:17:53]  *** Contents of shared directory: ***
[2025-10-12 07:17:53] total 414492
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas 219581804 Oct 11 21:15 ATLAS.root_0
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 21:15 input.tar.gz
[2025-10-12 07:17:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:15 start_atlas.sh
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas 199202342 Oct 12 07:11 HITS.pool.root.1
[2025-10-12 07:17:53] -rw-------. 1 boincer umatlas   5058560 Oct 12 07:17 result.tar.gz
07:17:54 (2839432): run_atlas exited; CPU time 44194.882938
07:17:54 (2839432): called boinc_finish(0)

</stderr_txt>
]]>

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