Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:19 (2735302): wrapper (7.7.26015): starting
10:39:19 (2735302): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 10:39:19] Arguments: --nthreads 3
[2025-10-12 10:39:19] Threads: 3
[2025-10-12 10:39:19] Checking for CVMFS
[2025-10-12 10:39:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:39:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:39:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:39:19] 2.9.2.0 1532479 3908 81316 151613 1 56 29867447 36864000 0 130560 0 3150660 99.991 134955 891 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 10:39:19] CVMFS is ok
[2025-10-12 10:39:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:39:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:39:19] Further information can be found at the LHC@home message board.
[2025-10-12 10:39:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:39:19] Checking for apptainer binary...
[2025-10-12 10:39:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:39:19] Running /usr/bin/apptainer --version
[2025-10-12 10:39:19] apptainer version 1.4.1-1.1
[2025-10-12 10:39:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:39:19] magicA161
[2025-10-12 10:39:19] apptainer works
[2025-10-12 10:39:19] Set ATHENA_PROC_NUMBER=3
[2025-10-12 10:39:19] Set ATHENA_CORE_NUMBER=3
[2025-10-12 10:39:19] Starting ATLAS job with PandaID=6838603277
[2025-10-12 10:39:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:57:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:57:38] 2025-10-12 09:57:07,328 | INFO     | ***************************************
[2025-10-12 11:57:38] 2025-10-12 09:57:07,328 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:57:38] 2025-10-12 09:57:07,328 | INFO     | ***************************************
[2025-10-12 11:57:38] 2025-10-12 09:57:07,328 | INFO     | 
[2025-10-12 11:57:38] 2025-10-12 09:57:07,329 | INFO     | architecture information:
[2025-10-12 11:57:38] 2025-10-12 09:57:07,329 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:57:38] 2025-10-12 09:57:07,338 | INFO     | cat /etc/os-release:
[2025-10-12 11:57:38] NAME="CentOS Linux"
[2025-10-12 11:57:38] VERSION="7 (Core)"
[2025-10-12 11:57:38] ID="centos"
[2025-10-12 11:57:38] ID_LIKE="rhel fedora"
[2025-10-12 11:57:38] VERSION_ID="7"
[2025-10-12 11:57:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:57:38] ANSI_COLOR="0;31"
[2025-10-12 11:57:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:57:38] HOME_URL="https://www.centos.org/"
[2025-10-12 11:57:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:57:38] 
[2025-10-12 11:57:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:57:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:57:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:57:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:57:38] 
[2025-10-12 11:57:38] 2025-10-12 09:57:07,338 | INFO     | ***************************************
[2025-10-12 11:57:38] 2025-10-12 09:57:07,840 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 11:57:38] 2025-10-12 09:57:07,853 | INFO     | sufficient remaining disk space (374804054016 B)
[2025-10-12 11:57:38] 2025-10-12 09:57:07,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | INFO     | update_server=False
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:57:38] 2025-10-12 09:57:07,854 | INFO     | aborting loop
[2025-10-12 11:57:38] 2025-10-12 09:57:08,140 | INFO     | all data control threads have been joined
[2025-10-12 11:57:38] 2025-10-12 09:57:08,443 | INFO     | all job control threads have been joined
[2025-10-12 11:57:38] 2025-10-12 09:57:08,633 | INFO     | all payload control threads have been joined
[2025-10-12 11:57:38] 2025-10-12 09:57:08,859 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:08,860 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:08,860 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:08,966 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,146 | INFO     | [data] control thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,238 | INFO     | [job] validate thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,303 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,335 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,375 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,449 | INFO     | [job] control thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,565 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,639 | INFO     | [payload] control thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:09,860 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:10,118 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:10,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:57:38] 2025-10-12 09:57:14,339 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:18,587 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:57:38] 2025-10-12 09:57:19,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:57:38] 2025-10-12 09:57:30,052 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:57:38] 2025-10-12 09:57:30,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015524644672)>', '<ExcThread(monitor, started 140014658778880)>']
[2025-10-12 11:57:38] 2025-10-12 09:57:35,682 | INFO     | all workflow threads have been joined
[2025-10-12 11:57:38] 2025-10-12 09:57:35,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:57:38] 2025-10-12 09:57:35,682 | INFO     | traces error code: 0
[2025-10-12 11:57:38] 2025-10-12 09:57:35,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | INFO     | PID=2739026 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:57:38] 2025-10-12 09:57:37,957 | INFO     | [monitor] control thread has ended
[2025-10-12 11:57:38] 2025-10-12 09:57:38,003 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:57:38] 2025-10-12 09:57:38,006 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:57:38] 2025-10-12 09:57:38,008 [wrapper] pilotpid: 2739026
[2025-10-12 11:57:38] 2025-10-12 09:57:38,011 [wrapper] Pilot exit status: 0
[2025-10-12 11:57:38] 2025-10-12 09:57:38,018 [wrapper] pandaids: 6838603277
[2025-10-12 11:57:38] 2025-10-12 09:57:38,035 [wrapper] cleanup supervisor_pilot 2757825 2739027
[2025-10-12 11:57:38] 2025-10-12 09:57:38,038 [wrapper] Test setup, not cleaning
[2025-10-12 11:57:38] 2025-10-12 09:57:38,040 [wrapper] apfmon messages muted
[2025-10-12 11:57:38] 2025-10-12 09:57:38,042 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:57:38] 2025-10-12 09:57:38,045 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:57:38]  *** Error codes and diagnostics ***
[2025-10-12 11:57:38]     "exeErrorCode": 0,
[2025-10-12 11:57:38]     "exeErrorDiag": "",
[2025-10-12 11:57:38]     "pilotErrorCode": 0,
[2025-10-12 11:57:38]     "pilotErrorDiag": "",
[2025-10-12 11:57:38]  *** Listing of results directory ***
[2025-10-12 11:57:38] total 403260
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:05 pilot3.tar.gz
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:07 queuedata.json
[2025-10-12 11:57:38] -rwx------ 1 boinc boinc     36292 Oct 11 17:08 runpilot2-wrapper.sh
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:57:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:39 run_atlas
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:39 job.xml
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc 219151912 Oct 12 10:39 EVNT.46676267._002395.pool.root.1
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc    569675 Oct 12 10:39 input.tar.gz
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:39 start_atlas.sh
[2025-10-12 11:57:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:39 shared
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:39 boinc_setup_complete
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      6449 Oct 12 10:39 init_data.xml
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:39 boinc_lockfile
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:39 pandaJob.out
[2025-10-12 11:57:38] -rw------- 1 boinc boinc    975520 Oct 12 10:39 agis_schedconf.cvmfs.json
[2025-10-12 11:57:38] -rw------- 1 boinc boinc   1560580 Oct 12 10:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:57:38] drwx------ 5 boinc boinc      4096 Oct 12 10:39 pilot3
[2025-10-12 11:57:38] -rw------- 1 boinc boinc 188007384 Oct 12 11:56 HITS.46676269._059995.pool.root.1
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:56 boinc_task_state.xml
[2025-10-12 11:57:38] -rw------- 1 boinc boinc        95 Oct 12 11:56 pilot_heartbeat.json
[2025-10-12 11:57:38] -rw------- 1 boinc boinc      1017 Oct 12 11:56 memory_monitor_summary.json
[2025-10-12 11:57:38] -rw------- 1 boinc boinc    255675 Oct 12 11:56 log.46676269._059995.job.log.tgz.1
[2025-10-12 11:57:38] -rw------- 1 boinc boinc      7759 Oct 12 11:57 heartbeat.json
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:57 boinc_mmap_file
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:57 wrapper_checkpoint.txt
[2025-10-12 11:57:38] -rw------- 1 boinc boinc       747 Oct 12 11:57 pilotlog.txt
[2025-10-12 11:57:38] -rw------- 1 boinc boinc    688750 Oct 12 11:57 log.46676269._059995.job.log.1
[2025-10-12 11:57:38] -rw------- 1 boinc boinc       357 Oct 12 11:57 output.list
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:57 runtime_log
[2025-10-12 11:57:38] -rw------- 1 boinc boinc    962560 Oct 12 11:57 result.tar.gz
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      8792 Oct 12 11:57 runtime_log.err
[2025-10-12 11:57:38] -rw------- 1 boinc boinc       661 Oct 12 11:57 pmqLDmzNqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmt8RMDmrh0bMm.diag
[2025-10-12 11:57:38] -rw-r--r-- 1 boinc boinc      9423 Oct 12 11:57 stderr.txt
[2025-10-12 11:57:38] HITS file was successfully produced:
[2025-10-12 11:57:38] -rw------- 1 boinc boinc 188007384 Oct 12 11:56 shared/HITS.pool.root.1
[2025-10-12 11:57:38]  *** Contents of shared directory: ***
[2025-10-12 11:57:38] total 399144
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc 219151912 Oct 12 10:39 ATLAS.root_0
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc    569675 Oct 12 10:39 input.tar.gz
[2025-10-12 11:57:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:39 start_atlas.sh
[2025-10-12 11:57:38] -rw------- 1 boinc boinc 188007384 Oct 12 11:56 HITS.pool.root.1
[2025-10-12 11:57:38] -rw------- 1 boinc boinc    962560 Oct 12 11:57 result.tar.gz
11:57:39 (2735302): run_atlas exited; CPU time 13225.007459
11:57:39 (2735302): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN