Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:12:33 (3639953): wrapper (7.7.26015): starting
10:12:33 (3639953): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 10:12:33] Arguments: --nthreads 3
[2025-10-12 10:12:33] Threads: 3
[2025-10-12 10:12:33] Checking for CVMFS
[2025-10-12 10:12:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:12:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:12:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:12:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:12:33] 2.9.2.0 2462523 4136 65320 151612 2 57 27045189 36864001 0 130560 0 3073583 99.991 136145 777 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 10:12:33] CVMFS is ok
[2025-10-12 10:12:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:12:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:12:33] Further information can be found at the LHC@home message board.
[2025-10-12 10:12:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:12:33] Checking for apptainer binary...
[2025-10-12 10:12:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:12:33] Running /usr/bin/apptainer --version
[2025-10-12 10:12:33] apptainer version 1.4.1-1.1
[2025-10-12 10:12:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:12:33] cosA121
[2025-10-12 10:12:33] apptainer works
[2025-10-12 10:12:34] Set ATHENA_PROC_NUMBER=3
[2025-10-12 10:12:34] Set ATHENA_CORE_NUMBER=3
[2025-10-12 10:12:34] Starting ATLAS job with PandaID=6838634746
[2025-10-12 10:12:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:38:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:38:57]  workdir=None
[2025-10-12 11:38:57] ]
[2025-10-12 11:38:57] 2025-10-12 09:37:59,212 | INFO     | transferring file log.46676269._062041.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838634746/log.46676269._062041.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 11:38:57] 2025-10-12 09:37:59,212 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838634746/log.46676269._062041.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0620
[2025-10-12 11:38:57] 2025-10-12 09:37:59,224 | INFO     | adding to output.list: log.46676269._062041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/bf/log.46676269._062041.job.log.tg
[2025-10-12 11:38:57] 2025-10-12 09:37:59,224 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 11:38:57] 2025-10-12 09:37:59,224 | INFO     | summary of transferred files:
[2025-10-12 11:38:57] 2025-10-12 09:37:59,224 | INFO     |  -- lfn=log.46676269._062041.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 11:38:57] 2025-10-12 09:37:59,225 | INFO     | stage-out finished correctly
[2025-10-12 11:38:57] 2025-10-12 09:37:59,312 | INFO     | time since job start (5114s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:00,287 | INFO     | monitor loop #393: job 0:6838634746 is in state 'finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:00,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:38:57] 2025-10-12 09:38:01,318 | INFO     | time since job start (5116s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:02,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | job 6838634746 has state=finished
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | preparing for final server update for job 6838634746 in state='finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | this job has now completed (state=finished)
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | log transfer has been attempted: DONE
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | job 6838634746 has finished - writing final server update
[2025-10-12 11:38:57] 2025-10-12 09:38:02,266 | INFO     | total number of processed events: 400 (read)
[2025-10-12 11:38:57] 2025-10-12 09:38:02,267 | INFO     | executing command: lscpu
[2025-10-12 11:38:57] 2025-10-12 09:38:02,281 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 11:38:57] 2025-10-12 09:38:02,791 | INFO     | monitor loop #394: job 0:6838634746 is in state 'finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:02,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:38:57] 2025-10-12 09:38:03,324 | INFO     | time since job start (5118s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:05,294 | INFO     | monitor loop #395: job 0:6838634746 is in state 'finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:05,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:38:57] 2025-10-12 09:38:05,329 | INFO     | time since job start (5120s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:07,334 | INFO     | time since job start (5122s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:07,797 | INFO     | monitor loop #396: job 0:6838634746 is in state 'finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:07,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:38:57] 2025-10-12 09:38:09,339 | INFO     | time since job start (5124s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:10,300 | INFO     | monitor loop #397: job 0:6838634746 is in state 'finished'
[2025-10-12 11:38:57] 2025-10-12 09:38:10,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,343 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:38:57] 2025-10-12 09:38:11,344 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4300.085083333334
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838634746/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | INFO     | extracted standard info from prmon json
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:38:57] 2025-10-12 09:38:11,345 | INFO     | time since job start (5126s) is within the limit (172800.0s)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,346 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:38:57] 2025-10-12 09:38:11,346 | INFO     | sum of square deviations: 141539398.0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,346 | INFO     | sum of deviations: -4034520846.0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | mean x: 1760259414.0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | mean y: 2444809.4805194805
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | -- intersect: 50177897019.265564
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | intersect: 50177897019.265564
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | chi2: 0.027517515779354407
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | -- intersect: 50177897019.265564
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | current memory leak: -28.50 B/s (using 77 data points, chi2=0.03)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | could have reported an average CPU frequency of 4262 MHz (6 samples)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | ..............................
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . Timing measurements:
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . get job = 0 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . initial setup = 1 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . payload setup = 5 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . stage-in = 0 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . payload execution = 5086 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . stage-out = 0 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | . log creation = 0 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,347 | INFO     | ..............................
[2025-10-12 11:38:57] 2025-10-12 09:38:11,729 | INFO     | 
[2025-10-12 11:38:57] 2025-10-12 09:38:11,729 | INFO     | job summary report
[2025-10-12 11:38:57] 2025-10-12 09:38:11,729 | INFO     | --------------------------------------------------
[2025-10-12 11:38:57] 2025-10-12 09:38:11,729 | INFO     | PanDA job id: 6838634746
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | task id: 46676269
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | errors: (none)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | pilot state: finished 
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | transexitcode: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | exeerrorcode: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,730 | INFO     | exeerrordiag: 
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | exitcode: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | exitmsg: OK
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | cpuconsumptiontime: 14628 s
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | nevents: 400
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | neventsw: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | pid: 3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:11,731 | INFO     | pgrp: 3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | corecount: 3
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | event service: False
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | sizes: {0: 2348860, 6: 2349122, 10: 2349150, 5096: 2375565, 5098: 2384693, 5101: 2384749, 5110: 2385071}
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | --------------------------------------------------
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | 
[2025-10-12 11:38:57] 2025-10-12 09:38:11,732 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:38:57] 2025-10-12 09:38:11,748 | INFO     | job 6838634746 has completed (purged errors)
[2025-10-12 11:38:57] 2025-10-12 09:38:11,748 | INFO     | overall cleanup function is called
[2025-10-12 11:38:57] 2025-10-12 09:38:12,754 | INFO     | --- collectZombieJob: --- 10, [3650134]
[2025-10-12 11:38:57] 2025-10-12 09:38:12,754 | INFO     | zombie collector waiting for pid 3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:12,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:38:57] 2025-10-12 09:38:12,755 | INFO     | collected zombie processes
[2025-10-12 11:38:57] 2025-10-12 09:38:12,755 | INFO     | will attempt to kill all subprocesses of pid=3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:12,800 | INFO     | process IDs to be killed: [3650134] (in reverse order)
[2025-10-12 11:38:57] 2025-10-12 09:38:12,824 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:38:57] 2025-10-12 09:38:12,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:38:57] 2025-10-12 09:38:12,825 | INFO     | did not find any defunct processes belonging to 3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:12,826 | INFO     | did not find any defunct processes belonging to 3650134
[2025-10-12 11:38:57] 2025-10-12 09:38:12,826 | INFO     | ready for new job
[2025-10-12 11:38:57] 2025-10-12 09:38:12,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | ***************************************
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | ***************************************
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | 
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | architecture information:
[2025-10-12 11:38:57] 2025-10-12 09:38:12,827 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:38:57] 2025-10-12 09:38:12,837 | INFO     | cat /etc/os-release:
[2025-10-12 11:38:57] NAME="CentOS Linux"
[2025-10-12 11:38:57] VERSION="7 (Core)"
[2025-10-12 11:38:57] ID="centos"
[2025-10-12 11:38:57] ID_LIKE="rhel fedora"
[2025-10-12 11:38:57] VERSION_ID="7"
[2025-10-12 11:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:38:57] ANSI_COLOR="0;31"
[2025-10-12 11:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:38:57] HOME_URL="https://www.centos.org/"
[2025-10-12 11:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:38:57] 
[2025-10-12 11:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:38:57] 
[2025-10-12 11:38:57] 2025-10-12 09:38:12,837 | INFO     | ***************************************
[2025-10-12 11:38:57] 2025-10-12 09:38:13,340 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 11:38:57] 2025-10-12 09:38:13,353 | INFO     | sufficient remaining disk space (333067583488 B)
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | INFO     | update_server=False
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:38:57] 2025-10-12 09:38:13,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:38:57] 2025-10-12 09:38:13,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:38:57] 2025-10-12 09:38:13,809 | INFO     | aborting loop
[2025-10-12 11:38:57] 2025-10-12 09:38:13,917 | INFO     | all payload control threads have been joined
[2025-10-12 11:38:57] 2025-10-12 09:38:14,042 | INFO     | all data control threads have been joined
[2025-10-12 11:38:57] 2025-10-12 09:38:14,359 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:14,360 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:14,419 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:14,769 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:14,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:38:57] 2025-10-12 09:38:14,814 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:14,828 | INFO     | all job control threads have been joined
[2025-10-12 11:38:57] 2025-10-12 09:38:14,923 | INFO     | [payload] control thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,048 | INFO     | [data] control thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,237 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,392 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,667 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,744 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,834 | INFO     | [job] control thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:15,846 | INFO     | [job] validate thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:16,784 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:17,361 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:23,753 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:38:57] 2025-10-12 09:38:24,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:38:57] 2025-10-12 09:38:44,452 | INFO     | PID=3643682 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:38:57] 2025-10-12 09:38:44,452 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:38:57] 2025-10-12 09:38:44,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:38:57] 2025-10-12 09:38:44,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:38:57] 2025-10-12 09:38:51,198 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:38:57] 2025-10-12 09:38:52,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697692264256)>', '<ExcThread(monitor, started 139696898307840)>']
[2025-10-12 11:38:57] 2025-10-12 09:38:52,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:38:57] 2025-10-12 09:38:52,487 | INFO     | [monitor] control thread has ended
[2025-10-12 11:38:57] 2025-10-12 09:38:57,027 | INFO     | all workflow threads have been joined
[2025-10-12 11:38:57] 2025-10-12 09:38:57,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:38:57] 2025-10-12 09:38:57,028 | INFO     | traces error code: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:57,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:38:57] 2025-10-12 09:38:57,076 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:38:57] 2025-10-12 09:38:57,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:38:57] 2025-10-12 09:38:57,083 [wrapper] pilotpid: 3643682
[2025-10-12 11:38:57] 2025-10-12 09:38:57,085 [wrapper] Pilot exit status: 0
[2025-10-12 11:38:57] 2025-10-12 09:38:57,093 [wrapper] pandaids: 6838634746
[2025-10-12 11:38:57] 2025-10-12 09:38:57,111 [wrapper] cleanup supervisor_pilot 3662298 3643683
[2025-10-12 11:38:57] 2025-10-12 09:38:57,114 [wrapper] Test setup, not cleaning
[2025-10-12 11:38:57] 2025-10-12 09:38:57,116 [wrapper] apfmon messages muted
[2025-10-12 11:38:57] 2025-10-12 09:38:57,119 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:38:57] 2025-10-12 09:38:57,122 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:38:57]  *** Error codes and diagnostics ***
[2025-10-12 11:38:57]     "exeErrorCode": 0,
[2025-10-12 11:38:57]     "exeErrorDiag": "",
[2025-10-12 11:38:57]     "pilotErrorCode": 0,
[2025-10-12 11:38:57]     "pilotErrorDiag": "",
[2025-10-12 11:38:57]  *** Listing of results directory ***
[2025-10-12 11:38:57] total 400964
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:33 queuedata.json
[2025-10-12 11:38:57] -rwx------ 1 boinc boinc     36292 Oct 11 19:33 runpilot2-wrapper.sh
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:33 pilot3.tar.gz
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:38:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:12 run_atlas
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:12 job.xml
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc 218195370 Oct 12 10:12 EVNT.46676267._002492.pool.root.1
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc    569679 Oct 12 10:12 input.tar.gz
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:12 start_atlas.sh
[2025-10-12 11:38:57] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:12 shared
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:12 boinc_setup_complete
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc      6199 Oct 12 10:12 init_data.xml
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:12 boinc_lockfile
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:12 pandaJob.out
[2025-10-12 11:38:57] -rw------- 1 boinc boinc    975520 Oct 12 10:12 agis_schedconf.cvmfs.json
[2025-10-12 11:38:57] -rw------- 1 boinc boinc   1560580 Oct 12 10:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:38:57] drwx------ 5 boinc boinc      4096 Oct 12 10:12 pilot3
[2025-10-12 11:38:57] -rw------- 1 boinc boinc 186453169 Oct 12 11:37 HITS.46676269._062041.pool.root.1
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:37 boinc_task_state.xml
[2025-10-12 11:38:57] -rw------- 1 boinc boinc      1019 Oct 12 11:37 memory_monitor_summary.json
[2025-10-12 11:38:57] -rw------- 1 boinc boinc    265554 Oct 12 11:37 log.46676269._062041.job.log.tgz.1
[2025-10-12 11:38:57] -rw------- 1 boinc boinc        95 Oct 12 11:38 pilot_heartbeat.json
[2025-10-12 11:38:57] -rw------- 1 boinc boinc      7760 Oct 12 11:38 heartbeat.json
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:38 boinc_mmap_file
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:38 wrapper_checkpoint.txt
[2025-10-12 11:38:57] -rw------- 1 boinc boinc      4824 Oct 12 11:38 pilotlog.txt
[2025-10-12 11:38:57] -rw------- 1 boinc boinc    751300 Oct 12 11:38 log.46676269._062041.job.log.1
[2025-10-12 11:38:57] -rw------- 1 boinc boinc       357 Oct 12 11:38 output.list
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:38 runtime_log
[2025-10-12 11:38:57] -rw------- 1 boinc boinc   1034240 Oct 12 11:38 result.tar.gz
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc      8782 Oct 12 11:38 runtime_log.err
[2025-10-12 11:38:57] -rw------- 1 boinc boinc       659 Oct 12 11:38 3bJMDmxdsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms6gNDmnIqWCn.diag
[2025-10-12 11:38:57] -rw-r--r-- 1 boinc boinc     22263 Oct 12 11:38 stderr.txt
[2025-10-12 11:38:57] HITS file was successfully produced:
[2025-10-12 11:38:57] -rw------- 1 boinc boinc 186453169 Oct 12 11:37 shared/HITS.pool.root.1
[2025-10-12 11:38:57]  *** Contents of shared directory: ***
[2025-10-12 11:38:57] total 396764
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc 218195370 Oct 12 10:12 ATLAS.root_0
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc    569679 Oct 12 10:12 input.tar.gz
[2025-10-12 11:38:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:12 start_atlas.sh
[2025-10-12 11:38:57] -rw------- 1 boinc boinc 186453169 Oct 12 11:37 HITS.pool.root.1
[2025-10-12 11:38:57] -rw------- 1 boinc boinc   1034240 Oct 12 11:38 result.tar.gz
11:38:58 (3639953): run_atlas exited; CPU time 14657.503229
11:38:58 (3639953): called boinc_finish(0)

</stderr_txt>
]]>

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