Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:46:29 (376875): wrapper (7.7.26015): starting
18:46:29 (376875): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:46:29] Arguments: --nthreads 8
[2025-10-11 18:46:29] Threads: 8
[2025-10-11 18:46:29] Checking for CVMFS
[2025-10-11 18:46:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:46:30] 2.13.2.0 2754702 128423 384916 151599 3 393 26263412 32935937 85241 16776704 0 828847000 99.688 682841230 33325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 18:46:30] CVMFS is ok
[2025-10-11 18:46:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:46:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:46:30] Further information can be found at the LHC@home message board.
[2025-10-11 18:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:46:30] Checking for apptainer binary...
[2025-10-11 18:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:46:30] Running /usr/bin/apptainer --version
[2025-10-11 18:46:30] apptainer version 1.4.3-1.el9
[2025-10-11 18:46:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:46:31] c7-9-14.aglt2.org
[2025-10-11 18:46:31] apptainer works
[2025-10-11 18:46:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:46:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:46:31] Starting ATLAS job with PandaID=6838453250
[2025-10-11 18:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:56:06]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:56:06] 2025-10-12 00:55:29,524 | INFO     | sum of square deviations: 522502943.9663862
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | sum of deviations: 23710328955.403362
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | mean x: 1760226566.0168068
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | mean y: 2101792.7983193276
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | -- intersect: -79874100625.27545
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | intersect: -79874100625.27545
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | chi2: 1.915396683350597
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | current chi2=1.915396683350597 (change=28.922888531924475 %)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | sum of square deviations: 459360470.4912284
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | sum of deviations: 22339112369.94737
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | mean x: 1760226413.508772
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | mean y: 2098477.052631579
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | -- intersect: -85599293401.25171
[2025-10-11 20:56:06] 2025-10-12 00:55:29,525 | INFO     | intersect: -85599293401.25171
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | chi2: 1.917429707036949
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | current chi2=1.917429707036949 (change=-0.10614113013893188 %)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | right removable region: 113
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | sum of square deviations: 522501723.9663862
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | sum of deviations: -3143724102.806722
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | mean x: 1760226871.0168068
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | mean y: 2133970.4033613447
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | -- intersect: 10592850492.478588
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | intersect: 10592850492.478588
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | chi2: 0.8953286472257106
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | current chi2=0.8953286472257106 (change=66.77587749180893 %)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,526 | INFO     | sum of square deviations: 459372548.4912284
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | sum of deviations: -4651888114.263159
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | mean x: 1760227023.508772
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | mean y: 2137518.263157895
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | -- intersect: 17827275733.333553
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | intersect: 17827275733.333553
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | chi2: 0.8681296989224158
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | current chi2=0.8681296989224158 (change=3.037873119281308 %)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | left removable region: 20
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | sum of square deviations: 249388862.0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,527 | INFO     | sum of deviations: 1928204876.0000002
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | mean x: 1760226993.0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | mean y: 2150617.935483871
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | -- intersect: -13607431797.053917
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | intersect: -13607431797.053917
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | chi2: 0.04481105687270159
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | -- intersect: -13607431797.053917
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | current memory leak: 7.73 B/s (using 93 data points, chi2=0.04)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | ..............................
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . Timing measurements:
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . get job = 0 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . initial setup = 4 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . payload setup = 32 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . stage-in = 0 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . payload execution = 7546 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . stage-out = 1 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | . log creation = 0 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,544 | INFO     | ..............................
[2025-10-11 20:56:06] 2025-10-12 00:55:29,543 | INFO     | sufficient remaining disk space (71792852992 B)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,572 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,572 | INFO     | size of work directory /tmp/boinchome/slots/8/PanDA_Pilot-6838453250: 3620324 B (within 2537553920 B limit)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,572 | INFO     | pfn file=/tmp/boinchome/slots/8/PanDA_Pilot-6838453250/HITS.46676269._059110.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,572 | INFO     | total size of present files: 0 B (workdir size: 3620324 B)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,572 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/8/PanDA_Pilot-6838453250/HITS.46676269._059110.pool.root.1 since it does not exist
[2025-10-11 20:56:06] 2025-10-12 00:55:29,703 | INFO     | time since job start (7681s) is within the limit (172800.0s)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | 
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | job summary report
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | --------------------------------------------------
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | PanDA job id: 6838453250
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | task id: 46676269
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | errors: (none)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | pilot state: finished 
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | transexitcode: 0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | exeerrorcode: 0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | exeerrordiag: 
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | exitcode: 0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | exitmsg: OK
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | cpuconsumptiontime: 22386 s
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | nevents: 400
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | neventsw: 0
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | pid: 447651
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | pgrp: 447651
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | corecount: 8
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | event service: False
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | sizes: {0: 2348856, 1: 2348856, 11: 2348884, 22: 2348912, 25: 2349202, 33: 2349230, 7583: 2376715, 7584: 2385713, 7585: 2385769, 7625: 2385991}
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | --------------------------------------------------
[2025-10-11 20:56:06] 2025-10-12 00:55:29,907 | INFO     | 
[2025-10-11 20:56:06] 2025-10-12 00:55:29,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | job 6838453250 has completed (purged errors)
[2025-10-11 20:56:06] 2025-10-12 00:55:29,956 | INFO     | overall cleanup function is called
[2025-10-11 20:56:06] 2025-10-12 00:55:30,988 | INFO     | --- collectZombieJob: --- 10, [447651]
[2025-10-11 20:56:06] 2025-10-12 00:55:30,989 | INFO     | zombie collector waiting for pid 447651
[2025-10-11 20:56:06] 2025-10-12 00:55:30,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:56:06] 2025-10-12 00:55:30,989 | INFO     | collected zombie processes
[2025-10-11 20:56:06] 2025-10-12 00:55:30,989 | INFO     | will attempt to kill all subprocesses of pid=447651
[2025-10-11 20:56:06] 2025-10-12 00:55:33,200 | INFO     | number of running child processes to parent process 447651: 1
[2025-10-11 20:56:06] 2025-10-12 00:55:33,201 | INFO     | maximum number of monitored processes: 7
[2025-10-11 20:56:06] 2025-10-12 00:55:33,201 | INFO     | aborting job monitoring since job object (job id=6838453250) has expired
[2025-10-11 20:56:06] 2025-10-12 00:55:33,466 | INFO     | process IDs to be killed: [447651] (in reverse order)
[2025-10-11 20:56:06] 2025-10-12 00:55:33,942 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:56:06] 2025-10-12 00:55:33,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:56:06] 2025-10-12 00:55:34,170 | INFO     | did not find any defunct processes belonging to 447651
[2025-10-11 20:56:06] 2025-10-12 00:55:34,292 | INFO     | did not find any defunct processes belonging to 447651
[2025-10-11 20:56:06] 2025-10-12 00:55:34,304 | INFO     | ready for new job
[2025-10-11 20:56:06] 2025-10-12 00:55:34,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:56:06] 2025-10-12 00:55:34,305 | INFO     | ***************************************
[2025-10-11 20:56:06] 2025-10-12 00:55:34,305 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:56:06] 2025-10-12 00:55:34,305 | INFO     | ***************************************
[2025-10-11 20:56:06] 2025-10-12 00:55:34,305 | INFO     | 
[2025-10-11 20:56:06] 2025-10-12 00:55:34,377 | INFO     | architecture information:
[2025-10-11 20:56:06] 2025-10-12 00:55:34,396 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:56:06] 2025-10-12 00:55:34,459 | INFO     | cat /etc/os-release:
[2025-10-11 20:56:06] NAME="CentOS Linux"
[2025-10-11 20:56:06] VERSION="7 (Core)"
[2025-10-11 20:56:06] ID="centos"
[2025-10-11 20:56:06] ID_LIKE="rhel fedora"
[2025-10-11 20:56:06] VERSION_ID="7"
[2025-10-11 20:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:56:06] ANSI_COLOR="0;31"
[2025-10-11 20:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:56:06] HOME_URL="https://www.centos.org/"
[2025-10-11 20:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:56:06] 
[2025-10-11 20:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:56:06] 
[2025-10-11 20:56:06] 2025-10-12 00:55:34,459 | INFO     | ***************************************
[2025-10-11 20:56:06] 2025-10-12 00:55:34,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | INFO     | sufficient remaining disk space (71797047296 B)
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | INFO     | update_server=False
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:56:06] 2025-10-12 00:55:35,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:56:06] 2025-10-12 00:55:35,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:56:06] 2025-10-12 00:55:35,020 | INFO     | aborting loop
[2025-10-11 20:56:06] 2025-10-12 00:55:35,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:56:06] 2025-10-12 00:55:35,171 | INFO     | all payload control threads have been joined
[2025-10-11 20:56:06] 2025-10-12 00:55:35,454 | INFO     | all data control threads have been joined
[2025-10-11 20:56:06] 2025-10-12 00:55:36,025 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,030 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,030 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,178 | INFO     | [payload] control thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,324 | INFO     | all job control threads have been joined
[2025-10-11 20:56:06] 2025-10-12 00:55:36,455 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,464 | INFO     | [data] control thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,464 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,935 | INFO     | [job] validate thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:36,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:56:06] 2025-10-12 00:55:37,070 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:37,174 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:37,264 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:37,343 | INFO     | [job] control thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:37,354 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:37,482 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:40,967 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:41,661 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:56:06] 2025-10-12 00:55:45,243 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:56:06] 2025-10-12 00:55:46,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:56:06] 2025-10-12 00:55:46,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702259111744)>', '<ExcThread(monitor, started 140701752866560)>']
[2025-10-11 20:56:06] 2025-10-12 00:55:51,759 | INFO     | all workflow threads have been joined
[2025-10-11 20:56:06] 2025-10-12 00:55:51,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:56:06] 2025-10-12 00:55:51,760 | INFO     | traces error code: 0
[2025-10-11 20:56:06] 2025-10-12 00:55:51,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:56:06] 2025-10-12 00:56:04,074 | INFO     | PID=396770 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 20:56:06] 2025-10-12 00:56:04,074 | INFO     | .. there are 116 such processes running
[2025-10-11 20:56:06] 2025-10-12 00:56:04,075 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:56:06] 2025-10-12 00:56:04,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:56:06] 2025-10-12 00:56:04,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:56:06] 2025-10-12 00:56:04,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:56:06] 2025-10-12 00:56:04,075 | INFO     | [monitor] control thread has ended
[2025-10-11 20:56:06] 2025-10-12 00:56:04,351 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:56:06] 2025-10-12 00:56:04,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:56:06] 2025-10-12 00:56:04,394 [wrapper] pilotpid: 396770
[2025-10-11 20:56:06] 2025-10-12 00:56:04,410 [wrapper] Pilot exit status: 0
[2025-10-11 20:56:06] 2025-10-12 00:56:04,480 [wrapper] pandaids: 6838453250
[2025-10-11 20:56:06] 2025-10-12 00:56:05,331 [wrapper] cleanup supervisor_pilot 1618512 396771
[2025-10-11 20:56:06] 2025-10-12 00:56:05,409 [wrapper] Test setup, not cleaning
[2025-10-11 20:56:06] 2025-10-12 00:56:05,436 [wrapper] apfmon messages muted
[2025-10-11 20:56:06] 2025-10-12 00:56:05,469 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:56:06] 2025-10-12 00:56:05,521 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:56:06]  *** Error codes and diagnostics ***
[2025-10-11 20:56:06]     "exeErrorCode": 0,
[2025-10-11 20:56:06]     "exeErrorDiag": "",
[2025-10-11 20:56:06]     "pilotErrorCode": 0,
[2025-10-11 20:56:06]     "pilotErrorDiag": "",
[2025-10-11 20:56:06]  *** Listing of results directory ***
[2025-10-11 20:56:06] total 410672
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 10:08 queuedata.json
[2025-10-11 20:56:06] -rwx------. 1 boincer umatlas     36292 Oct 11 10:08 runpilot2-wrapper.sh
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:56:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:46 run_atlas
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:46 job.xml
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas 219768211 Oct 11 18:46 EVNT.46676267._002374.pool.root.1
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:46 start_atlas.sh
[2025-10-11 20:56:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:46 shared
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 18:46 input.tar.gz
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:46 boinc_lockfile
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 18:46 pandaJob.out
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas    975520 Oct 11 18:47 agis_schedconf.cvmfs.json
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas   1560580 Oct 11 18:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:56:06] drwx------. 5 boincer umatlas      4096 Oct 11 18:47 pilot3
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas      7159 Oct 11 20:48 init_data.xml
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas 194237078 Oct 11 20:54 HITS.46676269._059110.pool.root.1
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas       529 Oct 11 20:54 boinc_task_state.xml
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas      1038 Oct 11 20:54 memory_monitor_summary.json
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas    362843 Oct 11 20:54 log.46676269._059110.job.log.tgz.1
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas        95 Oct 11 20:55 pilot_heartbeat.json
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas      7782 Oct 11 20:55 heartbeat.json
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas       823 Oct 11 20:56 pilotlog.txt
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 20:56 boinc_mmap_file
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas    946553 Oct 11 20:56 log.46676269._059110.job.log.1
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas        27 Oct 11 20:56 wrapper_checkpoint.txt
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas       357 Oct 11 20:56 output.list
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas       620 Oct 11 20:56 runtime_log
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas   1331200 Oct 11 20:56 result.tar.gz
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas       650 Oct 11 20:56 zcOODmASpR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmq2RMDmvBN5Vm.diag
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 20:56 runtime_log.err
[2025-10-11 20:56:06] -rw-r--r--. 1 boincer umatlas     21477 Oct 11 20:56 stderr.txt
[2025-10-11 20:56:06] HITS file was successfully produced:
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas 194237078 Oct 11 20:54 shared/HITS.pool.root.1
[2025-10-11 20:56:06]  *** Contents of shared directory: ***
[2025-10-11 20:56:06] total 406188
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas 219768211 Oct 11 18:46 ATLAS.root_0
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:46 start_atlas.sh
[2025-10-11 20:56:06] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 18:46 input.tar.gz
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas 194237078 Oct 11 20:54 HITS.pool.root.1
[2025-10-11 20:56:06] -rw-------. 1 boincer umatlas   1331200 Oct 11 20:56 result.tar.gz
20:56:07 (376875): run_atlas exited; CPU time 22677.498289
20:56:07 (376875): called boinc_finish(0)

</stderr_txt>
]]>

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