Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:36:16 (4095): wrapper (7.7.26015): starting
18:36:16 (4095): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:36:16] Arguments: --nthreads 12
[2025-10-11 18:36:16] Threads: 12
[2025-10-11 18:36:16] Checking for CVMFS
[2025-10-11 18:36:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:36:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:36:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:36:16] 2.11.2.0 2987 222003 97892 151599 0 59 13632718 20275201 1 130560 1 107610812 99.984 13365405 12212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:36:16] CVMFS is ok
[2025-10-11 18:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:36:16] Further information can be found at the LHC@home message board.
[2025-10-11 18:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:36:16] Checking for apptainer binary...
[2025-10-11 18:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:36:16] Running /usr/bin/apptainer --version
[2025-10-11 18:36:16] apptainer version 1.3.2-1.el7
[2025-10-11 18:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:36:18] c-205-19.aglt2.org
[2025-10-11 18:36:18] apptainer works
[2025-10-11 18:36:18] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:36:18] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:36:18] Starting ATLAS job with PandaID=6838634318
[2025-10-11 18:36:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:52:57]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:52:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838634318/log.46676269._061668.job.log.tgz.1
[2025-10-11 19:52:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/7d/log.46676269._061668.job.log.tgz.1
[2025-10-11 19:52:57]  workdir=None
[2025-10-11 19:52:57] ]
[2025-10-11 19:52:57] 2025-10-11 23:52:17,281 | INFO     | transferring file log.46676269._061668.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838634318/log.46676269._061668.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 19:52:57] 2025-10-11 23:52:17,281 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838634318/log.46676269._061668.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._061668.job
[2025-10-11 19:52:57] 2025-10-11 23:52:17,303 | INFO     | adding to output.list: log.46676269._061668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/7d/log.46676269._061668.job.log.tg
[2025-10-11 19:52:57] 2025-10-11 23:52:17,304 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 19:52:57] 2025-10-11 23:52:17,304 | INFO     | summary of transferred files:
[2025-10-11 19:52:57] 2025-10-11 23:52:17,304 | INFO     |  -- lfn=log.46676269._061668.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 19:52:57] 2025-10-11 23:52:17,305 | INFO     | stage-out finished correctly
[2025-10-11 19:52:57] 2025-10-11 23:52:17,388 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 19:52:57] 2025-10-11 23:52:17,482 | INFO     | monitor loop #339: job 0:6838634318 is in state 'finished'
[2025-10-11 19:52:57] 2025-10-11 23:52:17,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:52:57] 2025-10-11 23:52:18,079 | INFO     | time since job start (4545s) is within the limit (172800.0s)
[2025-10-11 19:52:57] 2025-10-11 23:52:19,985 | INFO     | monitor loop #340: job 0:6838634318 is in state 'finished'
[2025-10-11 19:52:57] 2025-10-11 23:52:19,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:52:57] 2025-10-11 23:52:20,085 | INFO     | time since job start (4547s) is within the limit (172800.0s)
[2025-10-11 19:52:57] 2025-10-11 23:52:20,274 | INFO     | job 6838634318 has state=finished
[2025-10-11 19:52:57] 2025-10-11 23:52:20,274 | INFO     | preparing for final server update for job 6838634318 in state='finished'
[2025-10-11 19:52:57] 2025-10-11 23:52:20,275 | INFO     | this job has now completed (state=finished)
[2025-10-11 19:52:57] 2025-10-11 23:52:20,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 19:52:57] 2025-10-11 23:52:20,275 | INFO     | log transfer has been attempted: DONE
[2025-10-11 19:52:57] 2025-10-11 23:52:20,275 | INFO     | job 6838634318 has finished - writing final server update
[2025-10-11 19:52:57] 2025-10-11 23:52:20,276 | INFO     | total number of processed events: 400 (read)
[2025-10-11 19:52:57] 2025-10-11 23:52:20,276 | INFO     | executing command: lscpu
[2025-10-11 19:52:57] 2025-10-11 23:52:20,302 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 19:52:57] 2025-10-11 23:52:22,090 | INFO     | time since job start (4549s) is within the limit (172800.0s)
[2025-10-11 19:52:57] 2025-10-11 23:52:22,500 | INFO     | monitor loop #341: job 0:6838634318 is in state 'finished'
[2025-10-11 19:52:57] 2025-10-11 23:52:22,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:52:57] 2025-10-11 23:52:23,208 | INFO     | PID=7769 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 19:52:57] 2025-10-11 23:52:24,209 | INFO     | time since job start (4551s) is within the limit (172800.0s)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,000 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 19:52:57] 2025-10-11 23:52:25,003 | INFO     | monitor loop #342: job 0:6838634318 is in state 'finished'
[2025-10-11 19:52:57] 2025-10-11 23:52:25,004 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-11 19:52:57] 2025-10-11 23:52:25,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,010 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634318/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,011 | INFO     | extracted standard info from prmon json
[2025-10-11 19:52:57] 2025-10-11 23:52:25,011 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:52:57] 2025-10-11 23:52:25,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:52:57] 2025-10-11 23:52:25,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:52:57] 2025-10-11 23:52:25,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:52:57] 2025-10-11 23:52:25,013 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:52:57] 2025-10-11 23:52:25,014 | INFO     | sum of square deviations: 93240818.0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,014 | INFO     | sum of deviations: -6449489191.0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,014 | INFO     | mean x: 1760224540.0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,014 | INFO     | mean y: 2787727.194029851
[2025-10-11 19:52:57] 2025-10-11 23:52:25,014 | INFO     | -- intersect: 121757930892.74356
[2025-10-11 19:52:57] 2025-10-11 23:52:25,015 | INFO     | intersect: 121757930892.74356
[2025-10-11 19:52:57] 2025-10-11 23:52:25,015 | INFO     | chi2: 0.11625750431783605
[2025-10-11 19:52:57] 2025-10-11 23:52:25,015 | INFO     | -- intersect: 121757930892.74356
[2025-10-11 19:52:57] 2025-10-11 23:52:25,015 | INFO     | current memory leak: -69.17 B/s (using 67 data points, chi2=0.12)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,015 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | ..............................
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . Timing measurements:
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . get job = 0 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . initial setup = 2 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . payload setup = 7 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . stage-in = 0 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . payload execution = 4515 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,016 | INFO     | . stage-out = 0 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,017 | INFO     | . log creation = 0 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,017 | INFO     | ..............................
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | 
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | job summary report
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | --------------------------------------------------
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | PanDA job id: 6838634318
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | task id: 46676269
[2025-10-11 19:52:57] 2025-10-11 23:52:25,231 | INFO     | errors: (none)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | pilot state: finished 
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | transexitcode: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | exeerrorcode: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | exeerrordiag: 
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | exitcode: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,232 | INFO     | exitmsg: OK
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | cpuconsumptiontime: 47920 s
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | nevents: 400
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | neventsw: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | pid: 14146
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | pgrp: 14146
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | corecount: 12
[2025-10-11 19:52:57] 2025-10-11 23:52:25,233 | INFO     | event service: False
[2025-10-11 19:52:57] 2025-10-11 23:52:25,234 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4526: 2375336, 4527: 2384334, 4528: 2384518, 4535: 2384712}
[2025-10-11 19:52:57] 2025-10-11 23:52:25,234 | INFO     | --------------------------------------------------
[2025-10-11 19:52:57] 2025-10-11 23:52:25,234 | INFO     | 
[2025-10-11 19:52:57] 2025-10-11 23:52:25,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:52:57] 2025-10-11 23:52:25,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:52:57] 2025-10-11 23:52:25,316 | INFO     | job 6838634318 has completed (purged errors)
[2025-10-11 19:52:57] 2025-10-11 23:52:25,316 | INFO     | overall cleanup function is called
[2025-10-11 19:52:57] 2025-10-11 23:52:26,322 | INFO     | --- collectZombieJob: --- 10, [14146]
[2025-10-11 19:52:57] 2025-10-11 23:52:26,323 | INFO     | zombie collector waiting for pid 14146
[2025-10-11 19:52:57] 2025-10-11 23:52:26,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:52:57] 2025-10-11 23:52:26,323 | INFO     | collected zombie processes
[2025-10-11 19:52:57] 2025-10-11 23:52:26,323 | INFO     | will attempt to kill all subprocesses of pid=14146
[2025-10-11 19:52:57] 2025-10-11 23:52:26,413 | INFO     | process IDs to be killed: [14146] (in reverse order)
[2025-10-11 19:52:57] 2025-10-11 23:52:26,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:52:57] 2025-10-11 23:52:26,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:52:57] 2025-10-11 23:52:26,472 | INFO     | did not find any defunct processes belonging to 14146
[2025-10-11 19:52:57] 2025-10-11 23:52:26,475 | INFO     | did not find any defunct processes belonging to 14146
[2025-10-11 19:52:57] 2025-10-11 23:52:26,475 | INFO     | ready for new job
[2025-10-11 19:52:57] 2025-10-11 23:52:26,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:52:57] 2025-10-11 23:52:26,477 | INFO     | ***************************************
[2025-10-11 19:52:57] 2025-10-11 23:52:26,477 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:52:57] 2025-10-11 23:52:26,477 | INFO     | ***************************************
[2025-10-11 19:52:57] 2025-10-11 23:52:26,477 | INFO     | 
[2025-10-11 19:52:57] 2025-10-11 23:52:26,478 | INFO     | architecture information:
[2025-10-11 19:52:57] 2025-10-11 23:52:26,478 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:52:57] 2025-10-11 23:52:26,493 | INFO     | cat /etc/os-release:
[2025-10-11 19:52:57] NAME="CentOS Linux"
[2025-10-11 19:52:57] VERSION="7 (Core)"
[2025-10-11 19:52:57] ID="centos"
[2025-10-11 19:52:57] ID_LIKE="rhel fedora"
[2025-10-11 19:52:57] VERSION_ID="7"
[2025-10-11 19:52:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:52:57] ANSI_COLOR="0;31"
[2025-10-11 19:52:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:52:57] HOME_URL="https://www.centos.org/"
[2025-10-11 19:52:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:52:57] 
[2025-10-11 19:52:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:52:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:52:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:52:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:52:57] 
[2025-10-11 19:52:57] 2025-10-11 23:52:26,493 | INFO     | ***************************************
[2025-10-11 19:52:57] 2025-10-11 23:52:26,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:52:57] 2025-10-11 23:52:27,012 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-11 19:52:57] 2025-10-11 23:52:27,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:52:57] 2025-10-11 23:52:27,013 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:52:57] 2025-10-11 23:52:27,013 | INFO     | update_server=False
[2025-10-11 19:52:57] 2025-10-11 23:52:27,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:52:57] 2025-10-11 23:52:27,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:52:57] 2025-10-11 23:52:27,126 | INFO     | all data control threads have been joined
[2025-10-11 19:52:57] 2025-10-11 23:52:27,422 | INFO     | all payload control threads have been joined
[2025-10-11 19:52:57] 2025-10-11 23:52:27,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:52:57] 2025-10-11 23:52:27,512 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:52:57] 2025-10-11 23:52:27,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:52:57] 2025-10-11 23:52:27,512 | INFO     | will abort loop
[2025-10-11 19:52:57] 2025-10-11 23:52:27,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:52:57] 2025-10-11 23:52:27,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:52:57] 2025-10-11 23:52:28,019 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,019 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,131 | INFO     | [data] control thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,332 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,427 | INFO     | [payload] control thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,452 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,517 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,572 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:28,627 | INFO     | all job control threads have been joined
[2025-10-11 19:52:57] 2025-10-11 23:52:29,213 | INFO     | [job] validate thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:29,263 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:29,293 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:29,441 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:29,632 | INFO     | [job] control thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:29,908 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:31,979 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:37,374 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:52:57] 2025-10-11 23:52:38,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:52:57] 2025-10-11 23:52:40,157 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:52:57] 2025-10-11 23:52:41,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996778768192)>', '<ExcThread(monitor, started 139996036052736)>']
[2025-10-11 19:52:57] 2025-10-11 23:52:46,441 | INFO     | all workflow threads have been joined
[2025-10-11 19:52:57] 2025-10-11 23:52:46,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:52:57] 2025-10-11 23:52:46,441 | INFO     | traces error code: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:46,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:52:57] 2025-10-11 23:52:57,413 | INFO     | PID=7769 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 19:52:57] 2025-10-11 23:52:57,414 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:52:57] 2025-10-11 23:52:57,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:52:57] 2025-10-11 23:52:57,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:52:57] 2025-10-11 23:52:57,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:52:57] 2025-10-11 23:52:57,414 | INFO     | [monitor] control thread has ended
[2025-10-11 19:52:57] 2025-10-11 23:52:57,510 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:52:57] 2025-10-11 23:52:57,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:52:57] 2025-10-11 23:52:57,518 [wrapper] pilotpid: 7769
[2025-10-11 19:52:57] 2025-10-11 23:52:57,522 [wrapper] Pilot exit status: 0
[2025-10-11 19:52:57] 2025-10-11 23:52:57,537 [wrapper] pandaids: 6838634318
[2025-10-11 19:52:57] 2025-10-11 23:52:57,578 [wrapper] cleanup supervisor_pilot 24174 7770
[2025-10-11 19:52:57] 2025-10-11 23:52:57,582 [wrapper] Test setup, not cleaning
[2025-10-11 19:52:57] 2025-10-11 23:52:57,586 [wrapper] apfmon messages muted
[2025-10-11 19:52:57] 2025-10-11 23:52:57,590 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:52:57] 2025-10-11 23:52:57,594 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:52:57]  *** Error codes and diagnostics ***
[2025-10-11 19:52:57]     "exeErrorCode": 0,
[2025-10-11 19:52:57]     "exeErrorDiag": "",
[2025-10-11 19:52:57]     "pilotErrorCode": 0,
[2025-10-11 19:52:57]     "pilotErrorDiag": "",
[2025-10-11 19:52:57]  *** Listing of results directory ***
[2025-10-11 19:52:57] total 410972
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:18 queuedata.json
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:18 pilot3.tar.gz
[2025-10-11 19:52:57] -rwx------ 1 boincer umatlas     36292 Oct 11 13:19 runpilot2-wrapper.sh
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas       100 Oct 11 18:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:52:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 18:36 run_atlas
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas       105 Oct 11 18:36 job.xml
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas 220297452 Oct 11 18:36 EVNT.46676267._002477.pool.root.1
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:36 start_atlas.sh
[2025-10-11 19:52:57] drwxrwx--x 2 boincer umatlas      4096 Oct 11 18:36 shared
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 18:36 input.tar.gz
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas         0 Oct 11 18:36 boinc_lockfile
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 18:36 pandaJob.out
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas    975520 Oct 11 18:36 agis_schedconf.cvmfs.json
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas   1560580 Oct 11 18:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:52:57] drwx------ 5 boincer umatlas      4096 Oct 11 18:36 pilot3
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 19:45 init_data.xml
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas 194519080 Oct 11 19:51 HITS.46676269._061668.pool.root.1
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas       529 Oct 11 19:52 boinc_task_state.xml
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas      1049 Oct 11 19:52 memory_monitor_summary.json
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas    394017 Oct 11 19:52 log.46676269._061668.job.log.tgz.1
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas      7858 Oct 11 19:52 heartbeat.json
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas        27 Oct 11 19:52 wrapper_checkpoint.txt
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 19:52 boinc_mmap_file
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas        95 Oct 11 19:52 pilot_heartbeat.json
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas       744 Oct 11 19:52 pilotlog.txt
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas    660522 Oct 11 19:52 log.46676269._061668.job.log.1
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas       357 Oct 11 19:52 output.list
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas       620 Oct 11 19:52 runtime_log
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas   1075200 Oct 11 19:52 result.tar.gz
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 19:52 runtime_log.err
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas       659 Oct 11 19:52 F5HLDm4QsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMJSMDmWKEsFo.diag
[2025-10-11 19:52:57] -rw-r--r-- 1 boincer umatlas     22345 Oct 11 19:52 stderr.txt
[2025-10-11 19:52:57] HITS file was successfully produced:
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas 194519080 Oct 11 19:51 shared/HITS.pool.root.1
[2025-10-11 19:52:57]  *** Contents of shared directory: ***
[2025-10-11 19:52:57] total 406736
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas 220297452 Oct 11 18:36 ATLAS.root_0
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:36 start_atlas.sh
[2025-10-11 19:52:57] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 18:36 input.tar.gz
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas 194519080 Oct 11 19:51 HITS.pool.root.1
[2025-10-11 19:52:57] -rw------- 1 boincer umatlas   1075200 Oct 11 19:52 result.tar.gz
19:52:59 (4095): run_atlas exited; CPU time 47893.194949
19:52:59 (4095): called boinc_finish(0)

</stderr_txt>
]]>

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