Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:41:39 (862145): wrapper (7.7.26015): starting
20:41:39 (862145): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:41:39] Arguments: --nthreads 4
[2025-10-11 20:41:39] Threads: 4
[2025-10-11 20:41:39] Checking for CVMFS
[2025-10-11 20:41:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:41:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:41:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:41:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:41:39] 2.11.5.0 2691367 3688 109844 151601 2 188 2988630 4096001 6454 130560 0 18270356 99.998 125624 2764 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 20:41:39] CVMFS is ok
[2025-10-11 20:41:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:41:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 20:41:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 20:41:39] Further information can be found at the LHC@home message board.
[2025-10-11 20:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:41:39] Checking for apptainer binary...
[2025-10-11 20:41:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:41:39] Running /usr/bin/apptainer --version
[2025-10-11 20:41:39] apptainer version 1.4.3
[2025-10-11 20:41:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:41:39] x32-linux3
[2025-10-11 20:41:39] apptainer works
[2025-10-11 20:41:39] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:41:39] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:41:39] Starting ATLAS job with PandaID=6838363823
[2025-10-11 20:41:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:45:06]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:45:06] 2025-10-12 02:44:25,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:45:06] 2025-10-12 02:44:25,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:45:06] 2025-10-12 02:44:25,495 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:45:06] 2025-10-12 02:44:25,495 | INFO     | sum of square deviations: 549294020.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | sum of deviations: -3255931729.999997
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | mean x: 1760233391.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | mean y: 2298657.6776859504
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | -- intersect: 10436054608.56605
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | intersect: 10436054608.56605
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | chi2: 1.9413852397070066
[2025-10-11 22:45:06] 2025-10-12 02:44:25,496 | INFO     | sum of square deviations: 483971865.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | sum of deviations: 4256746651.9999995
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | mean x: 1760233238.5
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | mean y: 2315612.706896552
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | -- intersect: -15479714411.340042
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | intersect: -15479714411.340042
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | chi2: 1.145521525183748
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | current chi2=1.145521525183748 (change=40.99463095966312 %)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,497 | INFO     | sum of square deviations: 424045160.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | sum of deviations: 4145760018.999998
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | mean x: 1760233086.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | mean y: 2315329.756756757
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | -- intersect: -17206945948.121727
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | intersect: -17206945948.121727
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | chi2: 1.1469796630695093
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | current chi2=1.1469796630695093 (change=-0.12729030871133734 %)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | right removable region: 110
[2025-10-11 22:45:06] 2025-10-12 02:44:25,498 | INFO     | sum of square deviations: 483971865.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | sum of deviations: -14891055199.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | mean x: 1760233543.5
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | mean y: 2325135.9655172415
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | -- intersect: 54161950426.14611
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | intersect: 54161950426.14611
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | chi2: 0.852747473522628
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | current chi2=0.852747473522628 (change=56.07530869806527 %)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,499 | INFO     | sum of square deviations: 424045160.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | sum of deviations: -13834617914.999996
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | mean x: 1760233696.0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | mean y: 2322435.153153153
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | -- intersect: 57430546884.80436
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | intersect: 57430546884.80436
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | chi2: 0.8535818095116944
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | current chi2=0.8535818095116944 (change=-0.09784092184052758 %)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | left removable region: 20
[2025-10-11 22:45:06] 2025-10-12 02:44:25,500 | INFO     | sum of square deviations: 226022842.5
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | sum of deviations: -3916229676.4999995
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | mean x: 1760233665.5
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | mean y: 2335211.1
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | -- intersect: 30501373459.437546
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | intersect: 30501373459.437546
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | chi2: 0.02340801743524234
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | -- intersect: 30501373459.437546
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | current memory leak: -17.33 B/s (using 90 data points, chi2=0.02)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | could have reported an average CPU frequency of 3855 MHz (8 samples)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | ..............................
[2025-10-11 22:45:06] 2025-10-12 02:44:25,501 | INFO     | . Timing measurements:
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . get job = 0 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . initial setup = 2 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . payload setup = 3 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . stage-in = 0 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . payload execution = 7329 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . stage-out = 0 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | . log creation = 0 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,502 | INFO     | ..............................
[2025-10-11 22:45:06] 2025-10-12 02:44:25,568 | INFO     | 
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | job summary report
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | --------------------------------------------------
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | PanDA job id: 6838363823
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | task id: 46676269
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | errors: (none)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | pilot state: finished 
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | transexitcode: 0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | exeerrorcode: 0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | exeerrordiag: 
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | exitcode: 0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | exitmsg: OK
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | cpuconsumptiontime: 28140 s
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | nevents: 400
[2025-10-11 22:45:06] 2025-10-12 02:44:25,569 | INFO     | neventsw: 0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | pid: 872624
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | pgrp: 872624
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | corecount: 4
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | event service: False
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | sizes: {0: 2348692, 1: 2348891, 4: 2349153, 11: 2349181, 7337: 2385665, 7340: 2385665, 7344: 2385987}
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | --------------------------------------------------
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | 
[2025-10-11 22:45:06] 2025-10-12 02:44:25,570 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | job 6838363823 has completed (purged errors)
[2025-10-11 22:45:06] 2025-10-12 02:44:25,587 | INFO     | overall cleanup function is called
[2025-10-11 22:45:06] 2025-10-12 02:44:26,593 | INFO     | --- collectZombieJob: --- 10, [872624]
[2025-10-11 22:45:06] 2025-10-12 02:44:26,593 | INFO     | zombie collector waiting for pid 872624
[2025-10-11 22:45:06] 2025-10-12 02:44:26,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:45:06] 2025-10-12 02:44:26,593 | INFO     | collected zombie processes
[2025-10-11 22:45:06] 2025-10-12 02:44:26,593 | INFO     | will attempt to kill all subprocesses of pid=872624
[2025-10-11 22:45:06] 2025-10-12 02:44:26,729 | INFO     | process IDs to be killed: [872624] (in reverse order)
[2025-10-11 22:45:06] 2025-10-12 02:44:26,780 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:45:06] 2025-10-12 02:44:26,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:45:06] 2025-10-12 02:44:26,784 | INFO     | did not find any defunct processes belonging to 872624
[2025-10-11 22:45:06] 2025-10-12 02:44:26,788 | INFO     | did not find any defunct processes belonging to 872624
[2025-10-11 22:45:06] 2025-10-12 02:44:26,788 | INFO     | ready for new job
[2025-10-11 22:45:06] 2025-10-12 02:44:26,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:45:06] 2025-10-12 02:44:26,789 | INFO     | ***************************************
[2025-10-11 22:45:06] 2025-10-12 02:44:26,789 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:45:06] 2025-10-12 02:44:26,790 | INFO     | ***************************************
[2025-10-11 22:45:06] 2025-10-12 02:44:26,790 | INFO     | 
[2025-10-11 22:45:06] 2025-10-12 02:44:26,810 | INFO     | architecture information:
[2025-10-11 22:45:06] 2025-10-12 02:44:26,810 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:45:06] 2025-10-12 02:44:26,822 | INFO     | cat /etc/os-release:
[2025-10-11 22:45:06] NAME="CentOS Linux"
[2025-10-11 22:45:06] VERSION="7 (Core)"
[2025-10-11 22:45:06] ID="centos"
[2025-10-11 22:45:06] ID_LIKE="rhel fedora"
[2025-10-11 22:45:06] VERSION_ID="7"
[2025-10-11 22:45:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:45:06] ANSI_COLOR="0;31"
[2025-10-11 22:45:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:45:06] HOME_URL="https://www.centos.org/"
[2025-10-11 22:45:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:45:06] 
[2025-10-11 22:45:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:45:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:45:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:45:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:45:06] 
[2025-10-11 22:45:06] 2025-10-12 02:44:26,822 | INFO     | ***************************************
[2025-10-11 22:45:06] 2025-10-12 02:44:27,325 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | INFO     | sufficient remaining disk space (396813664256 B)
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | INFO     | update_server=False
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:45:06] 2025-10-12 02:44:27,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:45:06] 2025-10-12 02:44:27,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:45:06] 2025-10-12 02:44:27,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:45:06] 2025-10-12 02:44:27,341 | INFO     | aborting loop
[2025-10-11 22:45:06] 2025-10-12 02:44:27,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:45:06] 2025-10-12 02:44:28,072 | INFO     | all job control threads have been joined
[2025-10-11 22:45:06] 2025-10-12 02:44:28,344 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,344 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,344 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,416 | INFO     | all data control threads have been joined
[2025-10-11 22:45:06] 2025-10-12 02:44:28,520 | INFO     | [job] validate thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,583 | INFO     | all payload control threads have been joined
[2025-10-11 22:45:06] 2025-10-12 02:44:28,740 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,972 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:28,992 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,076 | INFO     | [job] control thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,348 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,421 | INFO     | [data] control thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,541 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,588 | INFO     | [payload] control thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:29,828 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:31,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:38,004 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:45:06] 2025-10-12 02:44:39,008 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:45:06] 2025-10-12 02:44:57,467 | INFO     | PID=865981 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 22:45:06] 2025-10-12 02:44:57,467 | INFO     | .. there are 8 such processes running
[2025-10-11 22:45:06] 2025-10-12 02:44:57,467 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:45:06] 2025-10-12 02:44:57,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:45:06] 2025-10-12 02:44:57,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:45:06] 2025-10-12 02:44:59,832 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:45:06] 2025-10-12 02:45:01,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310611482432)>', '<ExcThread(monitor, started 140310172645120)>']
[2025-10-11 22:45:06] 2025-10-12 02:45:01,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:45:06] 2025-10-12 02:45:01,484 | INFO     | [monitor] control thread has ended
[2025-10-11 22:45:06] 2025-10-12 02:45:06,168 | INFO     | all workflow threads have been joined
[2025-10-11 22:45:06] 2025-10-12 02:45:06,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:45:06] 2025-10-12 02:45:06,168 | INFO     | traces error code: 0
[2025-10-11 22:45:06] 2025-10-12 02:45:06,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:45:06] 2025-10-12 02:45:06,256 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:45:06] 2025-10-12 02:45:06,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:45:06] 2025-10-12 02:45:06,260 [wrapper] pilotpid: 865981
[2025-10-11 22:45:06] 2025-10-12 02:45:06,262 [wrapper] Pilot exit status: 0
[2025-10-11 22:45:06] 2025-10-12 02:45:06,270 [wrapper] pandaids: 6838363823
[2025-10-11 22:45:06] 2025-10-12 02:45:06,302 [wrapper] cleanup supervisor_pilot 1071282 865982
[2025-10-11 22:45:06] 2025-10-12 02:45:06,304 [wrapper] Test setup, not cleaning
[2025-10-11 22:45:06] 2025-10-12 02:45:06,306 [wrapper] apfmon messages muted
[2025-10-11 22:45:06] 2025-10-12 02:45:06,308 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:45:06] 2025-10-12 02:45:06,310 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:45:06]  *** Error codes and diagnostics ***
[2025-10-11 22:45:06]     "exeErrorCode": 0,
[2025-10-11 22:45:06]     "exeErrorDiag": "",
[2025-10-11 22:45:06]     "pilotErrorCode": 0,
[2025-10-11 22:45:06]     "pilotErrorDiag": "",
[2025-10-11 22:45:06]  *** Listing of results directory ***
[2025-10-11 22:45:06] total 408872
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc    557409 Oct 11 06:52 pilot3.tar.gz
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:55 queuedata.json
[2025-10-11 22:45:06] -rwx------ 1 boinc boinc     36292 Oct 11 06:55 runpilot2-wrapper.sh
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:45:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:41 run_atlas
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:41 job.xml
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:41 start_atlas.sh
[2025-10-11 22:45:06] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:41 shared
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc    569676 Oct 11 20:41 input.tar.gz
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc      9157 Oct 11 20:41 init_data.xml
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc 222805269 Oct 11 20:41 EVNT.46676267._002281.pool.root.1
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:41 boinc_setup_complete
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:41 boinc_lockfile
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc      2549 Oct 11 20:41 pandaJob.out
[2025-10-11 22:45:06] -rw------- 1 boinc boinc    975496 Oct 11 20:41 agis_schedconf.cvmfs.json
[2025-10-11 22:45:06] -rw------- 1 boinc boinc   1560580 Oct 11 20:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:45:06] drwx------ 5 boinc boinc      4096 Oct 11 20:41 pilot3
[2025-10-11 22:45:06] -rw------- 1 boinc boinc 189230948 Oct 11 22:43 HITS.46676269._056319.pool.root.1
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc       529 Oct 11 22:43 boinc_task_state.xml
[2025-10-11 22:45:06] -rw------- 1 boinc boinc      1024 Oct 11 22:44 memory_monitor_summary.json
[2025-10-11 22:45:06] -rw------- 1 boinc boinc    302587 Oct 11 22:44 log.46676269._056319.job.log.tgz.1
[2025-10-11 22:45:06] -rw------- 1 boinc boinc      7750 Oct 11 22:44 heartbeat.json
[2025-10-11 22:45:06] -rw------- 1 boinc boinc        95 Oct 11 22:44 pilot_heartbeat.json
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc      8192 Oct 11 22:45 boinc_mmap_file
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc        27 Oct 11 22:45 wrapper_checkpoint.txt
[2025-10-11 22:45:06] -rw------- 1 boinc boinc      4902 Oct 11 22:45 pilotlog.txt
[2025-10-11 22:45:06] -rw------- 1 boinc boinc   1068075 Oct 11 22:45 log.46676269._056319.job.log.1
[2025-10-11 22:45:06] -rw------- 1 boinc boinc       357 Oct 11 22:45 output.list
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc       620 Oct 11 22:45 runtime_log
[2025-10-11 22:45:06] -rw------- 1 boinc boinc   1392640 Oct 11 22:45 result.tar.gz
[2025-10-11 22:45:06] -rw------- 1 boinc boinc       644 Oct 11 22:45 v9wNDmERmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQFgNDmYcuTOo.diag
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc      8764 Oct 11 22:45 runtime_log.err
[2025-10-11 22:45:06] -rw-r--r-- 1 boinc boinc     20931 Oct 11 22:45 stderr.txt
[2025-10-11 22:45:06] HITS file was successfully produced:
[2025-10-11 22:45:06] -rw------- 1 boinc boinc 189230948 Oct 11 22:43 shared/HITS.pool.root.1
[2025-10-11 22:45:06]  *** Contents of shared directory: ***
[2025-10-11 22:45:06] total 404324
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:41 start_atlas.sh
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc    569676 Oct 11 20:41 input.tar.gz
[2025-10-11 22:45:06] -rw-r--r-- 2 boinc boinc 222805269 Oct 11 20:41 ATLAS.root_0
[2025-10-11 22:45:06] -rw------- 1 boinc boinc 189230948 Oct 11 22:43 HITS.pool.root.1
[2025-10-11 22:45:06] -rw------- 1 boinc boinc   1392640 Oct 11 22:45 result.tar.gz
22:45:08 (862145): run_atlas exited; CPU time 28225.937191
22:45:08 (862145): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN