Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:20:10 (2482957): wrapper (7.7.26015): starting
15:20:10 (2482957): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 15:20:10] Arguments: --nthreads 3
[2025-10-12 15:20:10] Threads: 3
[2025-10-12 15:20:10] Checking for CVMFS
[2025-10-12 15:20:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:20:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:20:11] 2.9.2.0 1182477 4479 82372 151621 3 56 3735602 36864000 0 130560 0 3421804 99.991 152125 898 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 15:20:11] CVMFS is ok
[2025-10-12 15:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:20:11] Further information can be found at the LHC@home message board.
[2025-10-12 15:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:20:11] Checking for apptainer binary...
[2025-10-12 15:20:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:20:11] Running /usr/bin/apptainer --version
[2025-10-12 15:20:11] apptainer version 1.4.1-1.1
[2025-10-12 15:20:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:20:11] thA332
[2025-10-12 15:20:11] apptainer works
[2025-10-12 15:20:11] Set ATHENA_PROC_NUMBER=3
[2025-10-12 15:20:11] Set ATHENA_CORE_NUMBER=3
[2025-10-12 15:20:11] Starting ATLAS job with PandaID=6838634403
[2025-10-12 15:20:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:47:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:47:27] 2025-10-12 14:46:31,939 | INFO     | update_server=False
[2025-10-12 16:47:27] 2025-10-12 14:46:31,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:47:27] 2025-10-12 14:46:31,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:47:27] 2025-10-12 14:46:31,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:47:27] 2025-10-12 14:46:32,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:47:27] 2025-10-12 14:46:32,497 | INFO     | aborting loop
[2025-10-12 16:47:27] 2025-10-12 14:46:32,522 | INFO     | all data control threads have been joined
[2025-10-12 16:47:27] 2025-10-12 14:46:32,874 | INFO     | all payload control threads have been joined
[2025-10-12 16:47:27] 2025-10-12 14:46:32,928 | INFO     | all job control threads have been joined
[2025-10-12 16:47:27] 2025-10-12 14:46:32,944 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:32,945 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:32,955 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:32,956 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,244 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,503 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,528 | INFO     | [data] control thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,752 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,880 | INFO     | [payload] control thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,934 | INFO     | [job] control thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,944 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:33,966 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:34,015 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:34,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:47:27] 2025-10-12 14:46:34,332 | INFO     | [job] validate thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:38,211 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:46:42,665 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:47:27] 2025-10-12 14:46:43,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:47:27] 2025-10-12 14:47:02,270 | INFO     | PID=2486676 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:47:27] 2025-10-12 14:47:02,271 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:47:27] 2025-10-12 14:47:02,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:47:27] 2025-10-12 14:47:02,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:47:27] 2025-10-12 14:47:22,441 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:47:27] 2025-10-12 14:47:22,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155643500352)>', '<ExcThread(monitor, started 140155142776576)>']
[2025-10-12 16:47:27] 2025-10-12 14:47:23,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:47:27] 2025-10-12 14:47:23,374 | INFO     | [monitor] control thread has ended
[2025-10-12 16:47:27] 2025-10-12 14:47:27,736 | INFO     | all workflow threads have been joined
[2025-10-12 16:47:27] 2025-10-12 14:47:27,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:47:27] 2025-10-12 14:47:27,737 | INFO     | traces error code: 0
[2025-10-12 16:47:27] 2025-10-12 14:47:27,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:47:27] 2025-10-12 14:47:27,788 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:47:27] 2025-10-12 14:47:27,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:47:27] 2025-10-12 14:47:27,792 [wrapper] pilotpid: 2486676
[2025-10-12 16:47:27] 2025-10-12 14:47:27,795 [wrapper] Pilot exit status: 0
[2025-10-12 16:47:27] 2025-10-12 14:47:27,802 [wrapper] pandaids: 6838634403
[2025-10-12 16:47:27] 2025-10-12 14:47:27,819 [wrapper] cleanup supervisor_pilot 2504901 2486677
[2025-10-12 16:47:27] 2025-10-12 14:47:27,821 [wrapper] Test setup, not cleaning
[2025-10-12 16:47:27] 2025-10-12 14:47:27,823 [wrapper] apfmon messages muted
[2025-10-12 16:47:27] 2025-10-12 14:47:27,826 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:47:27] 2025-10-12 14:47:27,828 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:47:27]  *** Error codes and diagnostics ***
[2025-10-12 16:47:27]     "exeErrorCode": 0,
[2025-10-12 16:47:27]     "exeErrorDiag": "",
[2025-10-12 16:47:27]     "pilotErrorCode": 0,
[2025-10-12 16:47:27]     "pilotErrorDiag": "",
[2025-10-12 16:47:27]  *** Listing of results directory ***
[2025-10-12 16:47:27] total 417160
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:18 pilot3.tar.gz
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:21 queuedata.json
[2025-10-12 16:47:27] -rwx------ 1 boinc boinc     36292 Oct 11 19:21 runpilot2-wrapper.sh
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:47:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:20 run_atlas
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:20 job.xml
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 15:20 EVNT.46676267._002481.pool.root.1
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc    569677 Oct 12 15:20 input.tar.gz
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:20 start_atlas.sh
[2025-10-12 16:47:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:20 shared
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:20 boinc_setup_complete
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      6437 Oct 12 15:20 init_data.xml
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:20 boinc_lockfile
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:20 pandaJob.out
[2025-10-12 16:47:27] -rw------- 1 boinc boinc    975528 Oct 12 15:20 agis_schedconf.cvmfs.json
[2025-10-12 16:47:27] -rw------- 1 boinc boinc   1560580 Oct 12 15:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:47:27] drwx------ 5 boinc boinc      4096 Oct 12 15:20 pilot3
[2025-10-12 16:47:27] -rw------- 1 boinc boinc 198519027 Oct 12 16:46 HITS.46676269._061753.pool.root.1
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc       529 Oct 12 16:46 boinc_task_state.xml
[2025-10-12 16:47:27] -rw------- 1 boinc boinc      1021 Oct 12 16:46 memory_monitor_summary.json
[2025-10-12 16:47:27] -rw------- 1 boinc boinc    250157 Oct 12 16:46 log.46676269._061753.job.log.tgz.1
[2025-10-12 16:47:27] -rw------- 1 boinc boinc      7766 Oct 12 16:46 heartbeat.json
[2025-10-12 16:47:27] -rw------- 1 boinc boinc        95 Oct 12 16:47 pilot_heartbeat.json
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:47 boinc_mmap_file
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:47 wrapper_checkpoint.txt
[2025-10-12 16:47:27] -rw------- 1 boinc boinc      4824 Oct 12 16:47 pilotlog.txt
[2025-10-12 16:47:27] -rw------- 1 boinc boinc    756937 Oct 12 16:47 log.46676269._061753.job.log.1
[2025-10-12 16:47:27] -rw------- 1 boinc boinc       357 Oct 12 16:47 output.list
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:47 runtime_log
[2025-10-12 16:47:27] -rw------- 1 boinc boinc   1024000 Oct 12 16:47 result.tar.gz
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      8777 Oct 12 16:47 runtime_log.err
[2025-10-12 16:47:27] -rw------- 1 boinc boinc       658 Oct 12 16:47 EcxNDm4SsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv3gNDmgp7Mfn.diag
[2025-10-12 16:47:27] -rw-r--r-- 1 boinc boinc      7507 Oct 12 16:47 stderr.txt
[2025-10-12 16:47:27] HITS file was successfully produced:
[2025-10-12 16:47:27] -rw------- 1 boinc boinc 198519027 Oct 12 16:46 shared/HITS.pool.root.1
[2025-10-12 16:47:27]  *** Contents of shared directory: ***
[2025-10-12 16:47:27] total 412984
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 15:20 ATLAS.root_0
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc    569677 Oct 12 15:20 input.tar.gz
[2025-10-12 16:47:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:20 start_atlas.sh
[2025-10-12 16:47:27] -rw------- 1 boinc boinc 198519027 Oct 12 16:46 HITS.pool.root.1
[2025-10-12 16:47:27] -rw------- 1 boinc boinc   1024000 Oct 12 16:47 result.tar.gz
16:47:29 (2482957): run_atlas exited; CPU time 14864.556519
16:47:29 (2482957): called boinc_finish(0)

</stderr_txt>
]]>

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