Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:01 (2087823): wrapper (7.7.26015): starting
00:01:01 (2087823): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:01:01] Arguments: --nthreads 9
[2025-10-12 00:01:01] Threads: 9
[2025-10-12 00:01:01] Checking for CVMFS
[2025-10-12 00:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:05] 2.13.2.0 2209255 128755 277916 151606 0 274 22594953 32935936 30079 16776704 0 101316689 99.676 90819393 30198 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:01:05] CVMFS is ok
[2025-10-12 00:01:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:05] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:05] Checking for apptainer binary...
[2025-10-12 00:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:05] Running /usr/bin/apptainer --version
[2025-10-12 00:01:06] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:07] c-5-6.aglt2.org
[2025-10-12 00:01:07] apptainer works
[2025-10-12 00:01:07] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:01:07] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:01:08] Starting ATLAS job with PandaID=6838452865
[2025-10-12 00:01:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:30:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:30:33] 2025-10-12 17:29:49,796 | INFO     | -- intersect: -3961247695.5389986
[2025-10-12 13:30:33] 2025-10-12 17:29:49,796 | INFO     | intersect: -3961247695.5389986
[2025-10-12 13:30:33] 2025-10-12 17:29:49,822 | INFO     | chi2: 6.054680610745915
[2025-10-12 13:30:33] 2025-10-12 17:29:49,823 | INFO     | sum of square deviations: 149991718577.11337
[2025-10-12 13:30:33] 2025-10-12 17:29:49,860 | INFO     | sum of deviations: 391465553206.3251
[2025-10-12 13:30:33] 2025-10-12 17:29:49,860 | INFO     | mean x: 1760265887.3808918
[2025-10-12 13:30:33] 2025-10-12 17:29:49,885 | INFO     | mean y: 2121119.821656051
[2025-10-12 13:30:33] 2025-10-12 17:29:49,885 | INFO     | -- intersect: -4592022249.763869
[2025-10-12 13:30:33] 2025-10-12 17:29:49,885 | INFO     | intersect: -4592022249.763869
[2025-10-12 13:30:33] 2025-10-12 17:29:49,887 | INFO     | chi2: 5.380971627954363
[2025-10-12 13:30:33] 2025-10-12 17:29:49,887 | INFO     | current chi2=5.380971627954363 (change=11.127077150788853 %)
[2025-10-12 13:30:33] 2025-10-12 17:29:49,887 | INFO     | right removable region: 784
[2025-10-12 13:30:33] 2025-10-12 17:29:49,888 | INFO     | sum of square deviations: 149991584254.87402
[2025-10-12 13:30:33] 2025-10-12 17:29:49,945 | INFO     | sum of deviations: 142270166679.77448
[2025-10-12 13:30:33] 2025-10-12 17:29:49,946 | INFO     | mean x: 1760266192.379618
[2025-10-12 13:30:33] 2025-10-12 17:29:49,950 | INFO     | mean y: 2129301.648407643
[2025-10-12 13:30:33] 2025-10-12 17:29:49,950 | INFO     | -- intersect: -1667520137.9166143
[2025-10-12 13:30:33] 2025-10-12 17:29:49,950 | INFO     | intersect: -1667520137.9166143
[2025-10-12 13:30:33] 2025-10-12 17:29:49,952 | INFO     | chi2: 2.716350596974117
[2025-10-12 13:30:33] 2025-10-12 17:29:49,952 | INFO     | current chi2=2.716350596974117 (change=55.136351995956524 %)
[2025-10-12 13:30:33] 2025-10-12 17:29:49,953 | INFO     | sum of square deviations: 147143543785.91144
[2025-10-12 13:30:33] 2025-10-12 17:29:49,999 | INFO     | sum of deviations: 30133248616.62712
[2025-10-12 13:30:33] 2025-10-12 17:29:49,999 | INFO     | mean x: 1760266344.8807693
[2025-10-12 13:30:33] 2025-10-12 17:29:50,000 | INFO     | mean y: 2135305.2217948716
[2025-10-12 13:30:33] 2025-10-12 17:29:50,000 | INFO     | -- intersect: -358346317.2607295
[2025-10-12 13:30:33] 2025-10-12 17:29:50,000 | INFO     | intersect: -358346317.2607295
[2025-10-12 13:30:33] 2025-10-12 17:29:50,001 | INFO     | chi2: 1.728470603412037
[2025-10-12 13:30:33] 2025-10-12 17:29:50,001 | INFO     | current chi2=1.728470603412037 (change=36.367911957408246 %)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,002 | INFO     | sum of square deviations: 144331735365.18225
[2025-10-12 13:30:33] 2025-10-12 17:29:50,120 | INFO     | sum of deviations: -48164137612.92773
[2025-10-12 13:30:33] 2025-10-12 17:29:50,121 | INFO     | mean x: 1760266497.383226
[2025-10-12 13:30:33] 2025-10-12 17:29:50,121 | INFO     | mean y: 2139545.067096774
[2025-10-12 13:30:33] 2025-10-12 17:29:50,121 | INFO     | -- intersect: 589548250.4421188
[2025-10-12 13:30:33] 2025-10-12 17:29:50,121 | INFO     | intersect: 589548250.4421188
[2025-10-12 13:30:33] 2025-10-12 17:29:50,122 | INFO     | chi2: 1.1505733435815961
[2025-10-12 13:30:33] 2025-10-12 17:29:50,122 | INFO     | current chi2=1.1505733435815961 (change=33.43402304266324 %)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,137 | INFO     | sum of square deviations: 141556068191.48047
[2025-10-12 13:30:33] 2025-10-12 17:29:50,224 | INFO     | sum of deviations: -58122104312.402565
[2025-10-12 13:30:33] 2025-10-12 17:29:50,231 | INFO     | mean x: 1760266649.883117
[2025-10-12 13:30:33] 2025-10-12 17:29:50,231 | INFO     | mean y: 2140091.3844155846
[2025-10-12 13:30:33] 2025-10-12 17:29:50,231 | INFO     | -- intersect: 724895414.7645224
[2025-10-12 13:30:33] 2025-10-12 17:29:50,231 | INFO     | intersect: 724895414.7645224
[2025-10-12 13:30:33] 2025-10-12 17:29:50,232 | INFO     | chi2: 1.1397362285438715
[2025-10-12 13:30:33] 2025-10-12 17:29:50,232 | INFO     | current chi2=1.1397362285438715 (change=0.941888241908163 %)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,232 | INFO     | left removable region: 40
[2025-10-12 13:30:33] 2025-10-12 17:29:50,233 | INFO     | sum of square deviations: 127695256034.86955
[2025-10-12 13:30:33] 2025-10-12 17:29:50,344 | INFO     | sum of deviations: -25372987985.407238
[2025-10-12 13:30:33] 2025-10-12 17:29:50,396 | INFO     | mean x: 1760267076.8723118
[2025-10-12 13:30:33] 2025-10-12 17:29:50,396 | INFO     | mean y: 2143934.8588709678
[2025-10-12 13:30:33] 2025-10-12 17:29:50,397 | INFO     | -- intersect: 351908184.36546946
[2025-10-12 13:30:33] 2025-10-12 17:29:50,397 | INFO     | intersect: 351908184.36546946
[2025-10-12 13:30:33] 2025-10-12 17:29:50,398 | INFO     | chi2: 0.43748377442985537
[2025-10-12 13:30:33] 2025-10-12 17:29:50,398 | INFO     | -- intersect: 351908184.36546946
[2025-10-12 13:30:33] 2025-10-12 17:29:50,398 | INFO     | current memory leak: -0.20 B/s (using 744 data points, chi2=0.44)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,399 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,399 | INFO     | ..............................
[2025-10-12 13:30:33] 2025-10-12 17:29:50,399 | INFO     | . Timing measurements:
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . get job = 0 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . initial setup = 7 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . payload setup = 56 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . stage-in = 0 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . payload execution = 48233 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . stage-out = 7 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | . log creation = 1 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,400 | INFO     | ..............................
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | 
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | job summary report
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | --------------------------------------------------
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | PanDA job id: 6838452865
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | task id: 46676269
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | errors: (none)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | pilot state: finished 
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | transexitcode: 0
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | exeerrorcode: 0
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | exeerrordiag: 
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | exitcode: 0
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | exitmsg: OK
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | cpuconsumptiontime: 51536 s
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | nevents: 400
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | neventsw: 0
[2025-10-12 13:30:33] 2025-10-12 17:29:50,703 | INFO     | pid: 2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | pgrp: 2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | corecount: 9
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | event service: False
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | sizes: {0: 2347972, 1: 2348657, 2: 2348685, 3: 2348856, 4: 2348884, 15: 2348912, 26: 2349068, 38: 2349096, 49: 2349414, 60: 2349414, 48294: 2394812, 48302: 2403810
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | --------------------------------------------------
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | 
[2025-10-12 13:30:33] 2025-10-12 17:29:50,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 13:30:33] 2025-10-12 17:29:50,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | job 6838452865 has completed (purged errors)
[2025-10-12 13:30:33] 2025-10-12 17:29:50,778 | INFO     | overall cleanup function is called
[2025-10-12 13:30:33] 2025-10-12 17:29:51,789 | INFO     | --- collectZombieJob: --- 10, [2118759]
[2025-10-12 13:30:33] 2025-10-12 17:29:51,789 | INFO     | zombie collector waiting for pid 2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:51,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:30:33] 2025-10-12 17:29:51,789 | INFO     | collected zombie processes
[2025-10-12 13:30:33] 2025-10-12 17:29:51,790 | INFO     | will attempt to kill all subprocesses of pid=2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:53,168 | INFO     | process IDs to be killed: [2118759] (in reverse order)
[2025-10-12 13:30:33] 2025-10-12 17:29:53,349 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:30:33] 2025-10-12 17:29:53,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:30:33] 2025-10-12 17:29:53,363 | INFO     | did not find any defunct processes belonging to 2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:53,386 | INFO     | did not find any defunct processes belonging to 2118759
[2025-10-12 13:30:33] 2025-10-12 17:29:53,387 | INFO     | ready for new job
[2025-10-12 13:30:33] 2025-10-12 17:29:53,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:30:33] 2025-10-12 17:29:53,433 | INFO     | ***************************************
[2025-10-12 13:30:33] 2025-10-12 17:29:53,433 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:30:33] 2025-10-12 17:29:53,433 | INFO     | ***************************************
[2025-10-12 13:30:33] 2025-10-12 17:29:53,433 | INFO     | 
[2025-10-12 13:30:33] 2025-10-12 17:29:53,451 | INFO     | architecture information:
[2025-10-12 13:30:33] 2025-10-12 17:29:53,451 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:30:33] 2025-10-12 17:29:53,551 | INFO     | cat /etc/os-release:
[2025-10-12 13:30:33] NAME="CentOS Linux"
[2025-10-12 13:30:33] VERSION="7 (Core)"
[2025-10-12 13:30:33] ID="centos"
[2025-10-12 13:30:33] ID_LIKE="rhel fedora"
[2025-10-12 13:30:33] VERSION_ID="7"
[2025-10-12 13:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:30:33] ANSI_COLOR="0;31"
[2025-10-12 13:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:30:33] HOME_URL="https://www.centos.org/"
[2025-10-12 13:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:30:33] 
[2025-10-12 13:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:30:33] 
[2025-10-12 13:30:33] 2025-10-12 17:29:53,551 | INFO     | ***************************************
[2025-10-12 13:30:33] 2025-10-12 17:29:54,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 13:30:33] 2025-10-12 17:29:54,098 | INFO     | sufficient remaining disk space (75656855552 B)
[2025-10-12 13:30:33] 2025-10-12 17:29:54,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:30:33] 2025-10-12 17:29:54,099 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:30:33] 2025-10-12 17:29:54,099 | INFO     | update_server=False
[2025-10-12 13:30:33] 2025-10-12 17:29:54,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:30:33] 2025-10-12 17:29:54,300 | INFO     | all data control threads have been joined
[2025-10-12 13:30:33] 2025-10-12 17:29:54,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:30:33] 2025-10-12 17:29:54,612 | INFO     | all job control threads have been joined
[2025-10-12 13:30:33] 2025-10-12 17:29:54,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:30:33] 2025-10-12 17:29:54,949 | INFO     | aborting loop
[2025-10-12 13:30:33] 2025-10-12 17:29:55,016 | INFO     | all payload control threads have been joined
[2025-10-12 13:30:33] 2025-10-12 17:29:55,104 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,326 | INFO     | [data] control thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:30:33] 2025-10-12 17:29:55,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,507 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,667 | INFO     | [job] control thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:30:33] 2025-10-12 17:29:55,741 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,786 | INFO     | [job] validate thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,955 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:55,995 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:56,022 | INFO     | [payload] control thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:56,076 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:56,524 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:56,610 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:56,741 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:57,365 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:29:58,325 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:30:33] 2025-10-12 17:30:23,182 | INFO     | PID=2100685 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:30:33] 2025-10-12 17:30:23,183 | INFO     | .. there are 40 such processes running
[2025-10-12 13:30:33] 2025-10-12 17:30:23,183 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:30:33] 2025-10-12 17:30:23,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:30:33] 2025-10-12 17:30:23,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:30:33] 2025-10-12 17:30:26,314 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:30:33] 2025-10-12 17:30:26,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432793442112)>', '<ExcThread(monitor, started 140431975233280)>']
[2025-10-12 13:30:33] 2025-10-12 17:30:27,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:30:33] 2025-10-12 17:30:27,208 | INFO     | [monitor] control thread has ended
[2025-10-12 13:30:33] 2025-10-12 17:30:31,973 | INFO     | all workflow threads have been joined
[2025-10-12 13:30:33] 2025-10-12 17:30:31,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:30:33] 2025-10-12 17:30:31,974 | INFO     | traces error code: 0
[2025-10-12 13:30:33] 2025-10-12 17:30:31,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:30:33] 2025-10-12 17:30:32,830 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:30:33] 2025-10-12 17:30:32,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:30:33] 2025-10-12 17:30:32,878 [wrapper] pilotpid: 2100685
[2025-10-12 13:30:33] 2025-10-12 17:30:32,900 [wrapper] Pilot exit status: 0
[2025-10-12 13:30:33] 2025-10-12 17:30:32,932 [wrapper] pandaids: 6838452865
[2025-10-12 13:30:33] 2025-10-12 17:30:33,017 [wrapper] cleanup supervisor_pilot  573685 2100686
[2025-10-12 13:30:33] 2025-10-12 17:30:33,020 [wrapper] Test setup, not cleaning
[2025-10-12 13:30:33] 2025-10-12 17:30:33,023 [wrapper] apfmon messages muted
[2025-10-12 13:30:33] 2025-10-12 17:30:33,026 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:30:33] 2025-10-12 17:30:33,029 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:30:33]  *** Error codes and diagnostics ***
[2025-10-12 13:30:33]     "exeErrorCode": 0,
[2025-10-12 13:30:33]     "exeErrorDiag": "",
[2025-10-12 13:30:33]     "pilotErrorCode": 0,
[2025-10-12 13:30:33]     "pilotErrorDiag": "",
[2025-10-12 13:30:33]  *** Listing of results directory ***
[2025-10-12 13:30:33] total 425740
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:53 queuedata.json
[2025-10-12 13:30:33] -rwx------. 1 boincer umatlas     36292 Oct 11 09:55 runpilot2-wrapper.sh
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:30:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas 220826641 Oct 12 00:01 EVNT.46676267._002359.pool.root.1
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 13:30:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:01 input.tar.gz
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas      2546 Oct 12 00:01 pandaJob.out
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 13:30:33] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas 199204739 Oct 12 13:27 HITS.46676269._058822.pool.root.1
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas       531 Oct 12 13:28 boinc_task_state.xml
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 13:28 init_data.xml
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas      1045 Oct 12 13:29 memory_monitor_summary.json
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas    838886 Oct 12 13:29 log.46676269._058822.job.log.tgz.1
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas        95 Oct 12 13:29 pilot_heartbeat.json
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas      7826 Oct 12 13:29 heartbeat.json
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:30 boinc_mmap_file
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas      4824 Oct 12 13:30 pilotlog.txt
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 13:30 wrapper_checkpoint.txt
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas   5173877 Oct 12 13:30 log.46676269._058822.job.log.1
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas       357 Oct 12 13:30 output.list
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:30 runtime_log
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas   6031360 Oct 12 13:30 result.tar.gz
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 13:30 runtime_log.err
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas       655 Oct 12 13:30 Q6RMDm7EpR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmU1RMDmVw08cn.diag
[2025-10-12 13:30:33] -rw-r--r--. 1 boincer umatlas     21029 Oct 12 13:30 stderr.txt
[2025-10-12 13:30:33] HITS file was successfully produced:
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas 199204739 Oct 12 13:27 shared/HITS.pool.root.1
[2025-10-12 13:30:33]  *** Contents of shared directory: ***
[2025-10-12 13:30:33] total 416660
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas 220826641 Oct 12 00:01 ATLAS.root_0
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 13:30:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:01 input.tar.gz
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas 199204739 Oct 12 13:27 HITS.pool.root.1
[2025-10-12 13:30:33] -rw-------. 1 boincer umatlas   6031360 Oct 12 13:30 result.tar.gz
13:30:35 (2087823): run_atlas exited; CPU time 53492.532270
13:30:35 (2087823): called boinc_finish(0)

</stderr_txt>
]]>

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