Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:36:34 (3198723): wrapper (7.7.26015): starting
18:36:34 (3198723): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:36:34] Arguments: --nthreads 8
[2025-10-11 18:36:34] Threads: 8
[2025-10-11 18:36:34] Checking for CVMFS
[2025-10-11 18:36:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:36:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:36:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:36:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:36:35] 2.13.1.0 4140 3406 72372 151599 0 188 34243267 39288833 3664 16776704 0 11717285 99.997 116644 33547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:36:35] CVMFS is ok
[2025-10-11 18:36:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:36:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:36:35] Further information can be found at the LHC@home message board.
[2025-10-11 18:36:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:36:35] Checking for apptainer binary...
[2025-10-11 18:36:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:36:35] Running /usr/bin/apptainer --version
[2025-10-11 18:36:35] apptainer version 1.4.3-1.el9
[2025-10-11 18:36:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:36:35] c-210-16.aglt2.org
[2025-10-11 18:36:35] apptainer works
[2025-10-11 18:36:35] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:36:35] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:36:35] Starting ATLAS job with PandaID=6838634662
[2025-10-11 18:36:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:17:02]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:17:02]  mtime=0
[2025-10-11 20:17:02]  protocol_id=None
[2025-10-11 20:17:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 20:17:02]  replicas=None
[2025-10-11 20:17:02]  scope=mc23_13p6TeV
[2025-10-11 20:17:02]  status=None
[2025-10-11 20:17:02]  status_code=0
[2025-10-11 20:17:02]  storage_token=
[2025-10-11 20:17:02]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6838634662/log.46676269._061957.job.log.tgz.1
[2025-10-11 20:17:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/a9/log.46676269._061957.job.log.tgz.1
[2025-10-11 20:17:02]  workdir=None
[2025-10-11 20:17:02] ]
[2025-10-11 20:17:02] 2025-10-12 00:15:55,485 | INFO     | transferring file log.46676269._061957.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6838634662/log.46676269._061957.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 20:17:02] 2025-10-12 00:15:55,486 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6838634662/log.46676269._061957.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._061957.job
[2025-10-11 20:17:02] 2025-10-12 00:15:55,501 | INFO     | adding to output.list: log.46676269._061957.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/a9/log.46676269._061957.job.log.tg
[2025-10-11 20:17:02] 2025-10-12 00:15:55,502 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 20:17:02] 2025-10-12 00:15:55,502 | INFO     | summary of transferred files:
[2025-10-11 20:17:02] 2025-10-12 00:15:55,503 | INFO     |  -- lfn=log.46676269._061957.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 20:17:02] 2025-10-12 00:15:55,503 | INFO     | stage-out finished correctly
[2025-10-11 20:17:02] 2025-10-12 00:15:55,747 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:17:02] 2025-10-12 00:15:56,181 | INFO     | time since job start (5950s) is within the limit (172800.0s)
[2025-10-11 20:17:02] 2025-10-12 00:15:56,342 | INFO     | job 6838634662 has state=finished
[2025-10-11 20:17:02] 2025-10-12 00:15:56,342 | INFO     | preparing for final server update for job 6838634662 in state='finished'
[2025-10-11 20:17:02] 2025-10-12 00:15:56,343 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:17:02] 2025-10-12 00:15:56,343 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:17:02] 2025-10-12 00:15:56,343 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:17:02] 2025-10-12 00:15:56,343 | INFO     | job 6838634662 has finished - writing final server update
[2025-10-11 20:17:02] 2025-10-12 00:15:56,343 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:17:02] 2025-10-12 00:15:56,344 | INFO     | executing command: lscpu
[2025-10-11 20:17:02] 2025-10-12 00:15:56,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:17:02] 2025-10-12 00:15:56,658 | INFO     | monitor loop #445: job 0:6838634662 is in state 'finished'
[2025-10-11 20:17:02] 2025-10-12 00:15:56,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:17:02] 2025-10-12 00:15:58,187 | INFO     | time since job start (5952s) is within the limit (172800.0s)
[2025-10-11 20:17:02] 2025-10-12 00:15:59,161 | INFO     | monitor loop #446: job 0:6838634662 is in state 'finished'
[2025-10-11 20:17:02] 2025-10-12 00:15:59,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:17:02] 2025-10-12 00:15:59,676 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:17:02] 2025-10-12 00:15:59,683 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1930250000005
[2025-10-11 20:17:02] 2025-10-12 00:15:59,689 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838634662/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:17:02] 2025-10-12 00:15:59,690 | INFO     | extracted standard info from prmon json
[2025-10-11 20:17:02] 2025-10-12 00:15:59,690 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:17:02] 2025-10-12 00:15:59,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:17:02] 2025-10-12 00:15:59,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:17:02] 2025-10-12 00:15:59,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:17:02] 2025-10-12 00:15:59,693 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:17:02] 2025-10-12 00:15:59,694 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 20:17:02] 2025-10-12 00:15:59,694 | INFO     | sum of deviations: -7920718301.0
[2025-10-11 20:17:02] 2025-10-12 00:15:59,694 | INFO     | mean x: 1760225280.0
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | mean y: 2563125.967032967
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | -- intersect: 59676222208.57664
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | intersect: 59676222208.57664
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | chi2: 0.043155060240460466
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | -- intersect: 59676222208.57664
[2025-10-11 20:17:02] 2025-10-12 00:15:59,695 | INFO     | current memory leak: -33.90 B/s (using 91 data points, chi2=0.04)
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | could have reported an average CPU frequency of 2605 MHz (7 samples)
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | ..............................
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | . Timing measurements:
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | . get job = 0 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | . initial setup = 2 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,696 | INFO     | . payload setup = 4 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,697 | INFO     | . stage-in = 0 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,697 | INFO     | . payload execution = 5924 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,697 | INFO     | . stage-out = 0 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,697 | INFO     | . log creation = 0 s
[2025-10-11 20:17:02] 2025-10-12 00:15:59,697 | INFO     | ..............................
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | 
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | job summary report
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | --------------------------------------------------
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | PanDA job id: 6838634662
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | task id: 46676269
[2025-10-11 20:17:02] 2025-10-12 00:16:00,152 | INFO     | errors: (none)
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | pilot state: finished 
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | transexitcode: 0
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | exeerrorcode: 0
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | exeerrordiag: 
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | exitcode: 0
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | exitmsg: OK
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | cpuconsumptiontime: 43378 s
[2025-10-11 20:17:02] 2025-10-12 00:16:00,153 | INFO     | nevents: 400
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | neventsw: 0
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | pid: 3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | pgrp: 3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | corecount: 8
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | event service: False
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 5932: 2375941, 5933: 2375940, 5934: 2385122, 5935: 2385178, 5939: 2385372}
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | --------------------------------------------------
[2025-10-11 20:17:02] 2025-10-12 00:16:00,154 | INFO     | 
[2025-10-11 20:17:02] 2025-10-12 00:16:00,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 20:17:02] 2025-10-12 00:16:00,171 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,171 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,171 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:17:02] 2025-10-12 00:16:00,174 | INFO     | job 6838634662 has completed (purged errors)
[2025-10-11 20:17:02] 2025-10-12 00:16:00,174 | INFO     | overall cleanup function is called
[2025-10-11 20:17:02] 2025-10-12 00:16:01,180 | INFO     | --- collectZombieJob: --- 10, [3210963]
[2025-10-11 20:17:02] 2025-10-12 00:16:01,180 | INFO     | zombie collector waiting for pid 3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:01,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:17:02] 2025-10-12 00:16:01,181 | INFO     | collected zombie processes
[2025-10-11 20:17:02] 2025-10-12 00:16:01,181 | INFO     | will attempt to kill all subprocesses of pid=3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:01,407 | INFO     | process IDs to be killed: [3210963] (in reverse order)
[2025-10-11 20:17:02] 2025-10-12 00:16:01,470 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:17:02] 2025-10-12 00:16:01,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:17:02] 2025-10-12 00:16:01,477 | INFO     | did not find any defunct processes belonging to 3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:01,483 | INFO     | did not find any defunct processes belonging to 3210963
[2025-10-11 20:17:02] 2025-10-12 00:16:01,483 | INFO     | ready for new job
[2025-10-11 20:17:02] 2025-10-12 00:16:01,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:17:02] 2025-10-12 00:16:01,485 | INFO     | ***************************************
[2025-10-11 20:17:02] 2025-10-12 00:16:01,485 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:17:02] 2025-10-12 00:16:01,485 | INFO     | ***************************************
[2025-10-11 20:17:02] 2025-10-12 00:16:01,486 | INFO     | 
[2025-10-11 20:17:02] 2025-10-12 00:16:01,487 | INFO     | architecture information:
[2025-10-11 20:17:02] 2025-10-12 00:16:01,488 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:17:02] 2025-10-12 00:16:01,501 | INFO     | cat /etc/os-release:
[2025-10-11 20:17:02] NAME="CentOS Linux"
[2025-10-11 20:17:02] VERSION="7 (Core)"
[2025-10-11 20:17:02] ID="centos"
[2025-10-11 20:17:02] ID_LIKE="rhel fedora"
[2025-10-11 20:17:02] VERSION_ID="7"
[2025-10-11 20:17:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:17:02] ANSI_COLOR="0;31"
[2025-10-11 20:17:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:17:02] HOME_URL="https://www.centos.org/"
[2025-10-11 20:17:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:17:02] 
[2025-10-11 20:17:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:17:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:17:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:17:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:17:02] 
[2025-10-11 20:17:02] 2025-10-12 00:16:01,501 | INFO     | ***************************************
[2025-10-11 20:17:02] 2025-10-12 00:16:02,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 20:17:02] 2025-10-12 00:16:02,018 | INFO     | sufficient remaining disk space (51664388096 B)
[2025-10-11 20:17:02] 2025-10-12 00:16:02,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:17:02] 2025-10-12 00:16:02,018 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:17:02] 2025-10-12 00:16:02,019 | INFO     | update_server=False
[2025-10-11 20:17:02] 2025-10-12 00:16:02,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:17:02] 2025-10-12 00:16:02,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:17:02] 2025-10-12 00:16:02,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:17:02] 2025-10-12 00:16:02,315 | INFO     | all payload control threads have been joined
[2025-10-11 20:17:02] 2025-10-12 00:16:02,477 | INFO     | all data control threads have been joined
[2025-10-11 20:17:02] 2025-10-12 00:16:02,504 | INFO     | all job control threads have been joined
[2025-10-11 20:17:02] 2025-10-12 00:16:02,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:17:02] 2025-10-12 00:16:02,669 | INFO     | aborting loop
[2025-10-11 20:17:02] 2025-10-12 00:16:03,020 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,128 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,159 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,320 | INFO     | [payload] control thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,482 | INFO     | [data] control thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,510 | INFO     | [job] control thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,525 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:03,674 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,025 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,117 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,186 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,393 | INFO     | [job] validate thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,620 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:04,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:17:02] 2025-10-12 00:16:05,817 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:06,025 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:12,840 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:17:02] 2025-10-12 00:16:13,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:17:02] 2025-10-12 00:16:31,527 | INFO     | PID=3202378 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:17:02] 2025-10-12 00:16:31,528 | INFO     | .. there are 5 such processes running
[2025-10-11 20:17:02] 2025-10-12 00:16:31,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:17:02] 2025-10-12 00:16:31,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:17:02] 2025-10-12 00:16:31,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:17:02] 2025-10-12 00:16:55,502 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:17:02] 2025-10-12 00:16:57,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333616965440)>', '<ExcThread(monitor, started 140332687685376)>']
[2025-10-11 20:17:02] 2025-10-12 00:16:57,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:17:02] 2025-10-12 00:16:57,650 | INFO     | [monitor] control thread has ended
[2025-10-11 20:17:02] 2025-10-12 00:17:02,159 | INFO     | all workflow threads have been joined
[2025-10-11 20:17:02] 2025-10-12 00:17:02,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:17:02] 2025-10-12 00:17:02,160 | INFO     | traces error code: 0
[2025-10-11 20:17:02] 2025-10-12 00:17:02,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:17:02] 2025-10-12 00:17:02,256 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:17:02] 2025-10-12 00:17:02,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:17:02] 2025-10-12 00:17:02,261 [wrapper] pilotpid: 3202378
[2025-10-11 20:17:02] 2025-10-12 00:17:02,264 [wrapper] Pilot exit status: 0
[2025-10-11 20:17:02] 2025-10-12 00:17:02,273 [wrapper] pandaids: 6838634662
[2025-10-11 20:17:02] 2025-10-12 00:17:02,316 [wrapper] cleanup supervisor_pilot 3397847 3202379
[2025-10-11 20:17:02] 2025-10-12 00:17:02,319 [wrapper] Test setup, not cleaning
[2025-10-11 20:17:02] 2025-10-12 00:17:02,322 [wrapper] apfmon messages muted
[2025-10-11 20:17:02] 2025-10-12 00:17:02,324 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:17:02] 2025-10-12 00:17:02,327 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:17:02]  *** Error codes and diagnostics ***
[2025-10-11 20:17:02]     "exeErrorCode": 0,
[2025-10-11 20:17:02]     "exeErrorDiag": "",
[2025-10-11 20:17:02]     "pilotErrorCode": 0,
[2025-10-11 20:17:02]     "pilotErrorDiag": "",
[2025-10-11 20:17:02]  *** Listing of results directory ***
[2025-10-11 20:17:02] total 412304
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:18 pilot3.tar.gz
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:28 queuedata.json
[2025-10-11 20:17:02] -rwx------. 1 boincer umatlas     36292 Oct 11 13:28 runpilot2-wrapper.sh
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:17:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:36 run_atlas
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:36 job.xml
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas 223329399 Oct 11 18:36 EVNT.46676267._002489.pool.root.1
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:36 start_atlas.sh
[2025-10-11 20:17:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:36 shared
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 18:36 input.tar.gz
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:36 boinc_lockfile
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 18:36 pandaJob.out
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas    975520 Oct 11 18:36 agis_schedconf.cvmfs.json
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas   1560580 Oct 11 18:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:17:02] drwx------. 5 boincer umatlas      4096 Oct 11 18:36 pilot3
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 20:09 init_data.xml
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas 192524545 Oct 11 20:15 HITS.46676269._061957.pool.root.1
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas       529 Oct 11 20:15 boinc_task_state.xml
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas      1034 Oct 11 20:15 memory_monitor_summary.json
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas    345244 Oct 11 20:15 log.46676269._061957.job.log.tgz.1
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas      7817 Oct 11 20:15 heartbeat.json
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas        95 Oct 11 20:16 pilot_heartbeat.json
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas        27 Oct 11 20:16 wrapper_checkpoint.txt
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 20:16 boinc_mmap_file
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas      4895 Oct 11 20:17 pilotlog.txt
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas    871652 Oct 11 20:17 log.46676269._061957.job.log.1
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas       357 Oct 11 20:17 output.list
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas       620 Oct 11 20:17 runtime_log
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas   1239040 Oct 11 20:17 result.tar.gz
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 20:17 runtime_log.err
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas       651 Oct 11 20:17 oxtNDm2ZsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiKSMDmH4BCmn.diag
[2025-10-11 20:17:02] -rw-r--r--. 1 boincer umatlas     21688 Oct 11 20:17 stderr.txt
[2025-10-11 20:17:02] HITS file was successfully produced:
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas 192524545 Oct 11 20:15 shared/HITS.pool.root.1
[2025-10-11 20:17:02]  *** Contents of shared directory: ***
[2025-10-11 20:17:02] total 407908
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas 223329399 Oct 11 18:36 ATLAS.root_0
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:36 start_atlas.sh
[2025-10-11 20:17:02] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 18:36 input.tar.gz
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas 192524545 Oct 11 20:15 HITS.pool.root.1
[2025-10-11 20:17:02] -rw-------. 1 boincer umatlas   1239040 Oct 11 20:17 result.tar.gz
20:17:04 (3198723): run_atlas exited; CPU time 43480.752210
20:17:04 (3198723): called boinc_finish(0)

</stderr_txt>
]]>

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