Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:29:04 (816783): wrapper (7.7.26015): starting
20:29:04 (816783): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:29:04] Arguments: --nthreads 4
[2025-10-11 20:29:04] Threads: 4
[2025-10-11 20:29:04] Checking for CVMFS
[2025-10-11 20:29:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:29:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:29:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:29:04] 2.11.5.0 2691367 3676 108900 151601 3 133 2987466 4096001 5626 130560 0 18142918 99.998 125554 2770 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 20:29:04] CVMFS is ok
[2025-10-11 20:29:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:29:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 20:29:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 20:29:04] Further information can be found at the LHC@home message board.
[2025-10-11 20:29:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:29:04] Checking for apptainer binary...
[2025-10-11 20:29:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 20:29:04] Running /usr/bin/apptainer --version
[2025-10-11 20:29:04] apptainer version 1.4.3
[2025-10-11 20:29:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:29:04] x32-linux3
[2025-10-11 20:29:04] apptainer works
[2025-10-11 20:29:04] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:29:04] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:29:04] Starting ATLAS job with PandaID=6837705708
[2025-10-11 20:29:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:28:50]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:28:50] 2025-10-12 02:28:17,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:28:50] 2025-10-12 02:28:17,926 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:28:50] 2025-10-12 02:28:17,926 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,926 | INFO     | sum of deviations: -471783394.00000286
[2025-10-11 22:28:50] 2025-10-12 02:28:17,926 | INFO     | mean x: 1760232512.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,926 | INFO     | mean y: 2344750.7264957265
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | -- intersect: 1674622481.3289068
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | intersect: 1674622481.3289068
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | chi2: 1.121682849047821
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | sum of deviations: -71389398.00000082
[2025-10-11 22:28:50] 2025-10-12 02:28:17,927 | INFO     | mean x: 1760232359.5
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | mean y: 2345752.285714286
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | -- intersect: 290819204.2440471
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | sufficient remaining disk space (396615483392 B)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | intersect: 290819204.2440471
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | chi2: 1.1229164833616536
[2025-10-11 22:28:50] 2025-10-12 02:28:17,928 | INFO     | current chi2=1.1229164833616536 (change=-0.10998067010472906 %)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | right removable region: 111
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | sum of deviations: -10669590489.5
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | mean x: 1760232664.5
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | mean y: 2369437.3839285714
[2025-10-11 22:28:50] 2025-10-12 02:28:17,929 | INFO     | -- intersect: 43116532310.73367
[2025-10-11 22:28:50] 2025-10-12 02:28:17,930 | INFO     | intersect: 43116532310.73367
[2025-10-11 22:28:50] 2025-10-12 02:28:17,930 | INFO     | size of work directory /var/lib/boinc-client/slots/6/PanDA_Pilot-6837705708: 2431252 B (within 2537553920 B limit)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,930 | INFO     | chi2: 0.017736404564616715
[2025-10-11 22:28:50] 2025-10-12 02:28:17,930 | INFO     | current chi2=0.017736404564616715 (change=98.41876831943425 %)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,930 | INFO     | pfn file=/var/lib/boinc-client/slots/6/PanDA_Pilot-6837705708/HITS.46676269._042514.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | total size of present files: 0 B (workdir size: 2431252 B)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | sum of deviations: -9200407350.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | mean x: 1760232817.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | mean y: 2365410.121495327
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/6/PanDA_Pilot-6837705708/HITS.46676269._042514.pool.root.1 since it does not exist
[2025-10-11 22:28:50] 2025-10-12 02:28:17,931 | INFO     | -- intersect: 42639238553.14841
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | intersect: 42639238553.14841
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | chi2: 0.01762752832861624
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | current chi2=0.01762752832861624 (change=0.6138574230409687 %)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | left removable region: 20
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | sum of square deviations: 233641590.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | sum of deviations: -6317007317.000001
[2025-10-11 22:28:50] 2025-10-12 02:28:17,932 | INFO     | mean x: 1760232939.0
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | mean y: 2360772.3516483516
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | -- intersect: 47594077449.538345
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | intersect: 47594077449.538345
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | chi2: 0.01571689236306211
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | -- intersect: 47594077449.538345
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | current memory leak: -27.04 B/s (using 91 data points, chi2=0.02)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,933 | INFO     | could have reported an average CPU frequency of 3832 MHz (7 samples)
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | ..............................
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . Timing measurements:
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . get job = 0 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . initial setup = 2 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . payload setup = 3 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . stage-in = 0 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . payload execution = 7119 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . stage-out = 0 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | . log creation = 0 s
[2025-10-11 22:28:50] 2025-10-12 02:28:17,934 | INFO     | ..............................
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | 
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | job summary report
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | --------------------------------------------------
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | PanDA job id: 6837705708
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | task id: 46676269
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | errors: (none)
[2025-10-11 22:28:50] 2025-10-12 02:28:18,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | pilot state: finished 
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | transexitcode: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | exeerrorcode: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | exeerrordiag: 
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | exitcode: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | exitmsg: OK
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | cpuconsumptiontime: 27470 s
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | nevents: 400
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | neventsw: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | pid: 835757
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | pgrp: 835757
[2025-10-11 22:28:50] 2025-10-12 02:28:18,001 | INFO     | corecount: 4
[2025-10-11 22:28:50] 2025-10-12 02:28:18,002 | INFO     | event service: False
[2025-10-11 22:28:50] 2025-10-12 02:28:18,002 | INFO     | sizes: {0: 2348863, 1: 2348863, 4: 2349153, 11: 2349181, 7126: 2376546, 7127: 2385741, 7128: 2385741, 7131: 2385963}
[2025-10-11 22:28:50] 2025-10-12 02:28:18,002 | INFO     | --------------------------------------------------
[2025-10-11 22:28:50] 2025-10-12 02:28:18,002 | INFO     | 
[2025-10-11 22:28:50] 2025-10-12 02:28:18,002 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-10-11 22:28:50] 2025-10-12 02:28:18,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | job 6837705708 has completed (purged errors)
[2025-10-11 22:28:50] 2025-10-12 02:28:18,021 | INFO     | overall cleanup function is called
[2025-10-11 22:28:50] 2025-10-12 02:28:18,142 | INFO     | number of running child processes to parent process 835757: 1
[2025-10-11 22:28:50] 2025-10-12 02:28:18,142 | INFO     | maximum number of monitored processes: 6
[2025-10-11 22:28:50] 2025-10-12 02:28:18,142 | INFO     | aborting job monitoring since job object (job id=6837705708) has expired
[2025-10-11 22:28:50] 2025-10-12 02:28:19,029 | INFO     | --- collectZombieJob: --- 10, [835757]
[2025-10-11 22:28:50] 2025-10-12 02:28:19,029 | INFO     | zombie collector waiting for pid 835757
[2025-10-11 22:28:50] 2025-10-12 02:28:19,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:28:50] 2025-10-12 02:28:19,029 | INFO     | collected zombie processes
[2025-10-11 22:28:50] 2025-10-12 02:28:19,029 | INFO     | will attempt to kill all subprocesses of pid=835757
[2025-10-11 22:28:50] 2025-10-12 02:28:19,150 | INFO     | process IDs to be killed: [835757] (in reverse order)
[2025-10-11 22:28:50] 2025-10-12 02:28:19,200 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:28:50] 2025-10-12 02:28:19,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:28:50] 2025-10-12 02:28:19,204 | INFO     | did not find any defunct processes belonging to 835757
[2025-10-11 22:28:50] 2025-10-12 02:28:19,208 | INFO     | did not find any defunct processes belonging to 835757
[2025-10-11 22:28:50] 2025-10-12 02:28:19,208 | INFO     | ready for new job
[2025-10-11 22:28:50] 2025-10-12 02:28:19,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:28:50] 2025-10-12 02:28:19,209 | INFO     | ***************************************
[2025-10-11 22:28:50] 2025-10-12 02:28:19,209 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:28:50] 2025-10-12 02:28:19,209 | INFO     | ***************************************
[2025-10-11 22:28:50] 2025-10-12 02:28:19,209 | INFO     | 
[2025-10-11 22:28:50] 2025-10-12 02:28:19,230 | INFO     | architecture information:
[2025-10-11 22:28:50] 2025-10-12 02:28:19,230 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:28:50] 2025-10-12 02:28:19,242 | INFO     | cat /etc/os-release:
[2025-10-11 22:28:50] NAME="CentOS Linux"
[2025-10-11 22:28:50] VERSION="7 (Core)"
[2025-10-11 22:28:50] ID="centos"
[2025-10-11 22:28:50] ID_LIKE="rhel fedora"
[2025-10-11 22:28:50] VERSION_ID="7"
[2025-10-11 22:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:28:50] ANSI_COLOR="0;31"
[2025-10-11 22:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:28:50] HOME_URL="https://www.centos.org/"
[2025-10-11 22:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:28:50] 
[2025-10-11 22:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:28:50] 
[2025-10-11 22:28:50] 2025-10-12 02:28:19,242 | INFO     | ***************************************
[2025-10-11 22:28:50] 2025-10-12 02:28:19,745 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-10-11 22:28:50] 2025-10-12 02:28:19,760 | INFO     | sufficient remaining disk space (396618629120 B)
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | INFO     | update_server=False
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:28:50] 2025-10-12 02:28:19,761 | INFO     | aborting loop
[2025-10-11 22:28:50] 2025-10-12 02:28:20,400 | INFO     | all payload control threads have been joined
[2025-10-11 22:28:50] 2025-10-12 02:28:20,761 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:20,764 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:20,764 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:20,832 | INFO     | all data control threads have been joined
[2025-10-11 22:28:50] 2025-10-12 02:28:20,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:28:50] 2025-10-12 02:28:20,848 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:20,864 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:20,880 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,405 | INFO     | [payload] control thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,408 | INFO     | all job control threads have been joined
[2025-10-11 22:28:50] 2025-10-12 02:28:21,504 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,732 | INFO     | [job] validate thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,767 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,837 | INFO     | [data] control thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:21,985 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:22,061 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:22,412 | INFO     | [job] control thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:24,346 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:28:50] 2025-10-12 02:28:24,852 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:29,856 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:28:50] 2025-10-12 02:28:30,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:28:50] 2025-10-12 02:28:32,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425812588352)>', '<ExcThread(monitor, started 140425130129152)>']
[2025-10-11 22:28:50] 2025-10-12 02:28:37,305 | INFO     | all workflow threads have been joined
[2025-10-11 22:28:50] 2025-10-12 02:28:37,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:28:50] 2025-10-12 02:28:37,306 | INFO     | traces error code: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:37,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | INFO     | PID=820678 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | INFO     | .. there are 8 such processes running
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:28:50] 2025-10-12 02:28:50,215 | INFO     | [monitor] control thread has ended
[2025-10-11 22:28:50] 2025-10-12 02:28:50,294 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:28:50] 2025-10-12 02:28:50,296 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:28:50] 2025-10-12 02:28:50,299 [wrapper] pilotpid: 820678
[2025-10-11 22:28:50] 2025-10-12 02:28:50,302 [wrapper] Pilot exit status: 0
[2025-10-11 22:28:50] 2025-10-12 02:28:50,310 [wrapper] pandaids: 6837705708
[2025-10-11 22:28:50] 2025-10-12 02:28:50,343 [wrapper] cleanup supervisor_pilot 1002196 820679
[2025-10-11 22:28:50] 2025-10-12 02:28:50,345 [wrapper] Test setup, not cleaning
[2025-10-11 22:28:50] 2025-10-12 02:28:50,347 [wrapper] apfmon messages muted
[2025-10-11 22:28:50] 2025-10-12 02:28:50,349 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:28:50] 2025-10-12 02:28:50,351 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:28:50]  *** Error codes and diagnostics ***
[2025-10-11 22:28:50]     "exeErrorCode": 0,
[2025-10-11 22:28:50]     "exeErrorDiag": "",
[2025-10-11 22:28:50]     "pilotErrorCode": 0,
[2025-10-11 22:28:50]     "pilotErrorDiag": "",
[2025-10-11 22:28:50]  *** Listing of results directory ***
[2025-10-11 22:28:50] total 412908
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc    557409 Oct 10 13:17 pilot3.tar.gz
[2025-10-11 22:28:50] -rwx------ 1 boinc boinc     36292 Oct 10 13:42 runpilot2-wrapper.sh
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:42 queuedata.json
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:28:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:29 run_atlas
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:29 job.xml
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:29 start_atlas.sh
[2025-10-11 22:28:50] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:29 shared
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:29 input.tar.gz
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc      9157 Oct 11 20:29 init_data.xml
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc 221488519 Oct 11 20:29 EVNT.46676267._001722.pool.root.1
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:29 boinc_setup_complete
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:29 boinc_lockfile
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc      2549 Oct 11 20:29 pandaJob.out
[2025-10-11 22:28:50] -rw------- 1 boinc boinc    975496 Oct 11 20:29 agis_schedconf.cvmfs.json
[2025-10-11 22:28:50] -rw------- 1 boinc boinc   1560580 Oct 11 20:29 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:28:50] drwx------ 5 boinc boinc      4096 Oct 11 20:29 pilot3
[2025-10-11 22:28:50] -rw------- 1 boinc boinc 194770163 Oct 11 22:27 HITS.46676269._042514.pool.root.1
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc       530 Oct 11 22:27 boinc_task_state.xml
[2025-10-11 22:28:50] -rw------- 1 boinc boinc        95 Oct 11 22:27 pilot_heartbeat.json
[2025-10-11 22:28:50] -rw------- 1 boinc boinc      1025 Oct 11 22:28 memory_monitor_summary.json
[2025-10-11 22:28:50] -rw------- 1 boinc boinc    288361 Oct 11 22:28 log.46676269._042514.job.log.tgz.1
[2025-10-11 22:28:50] -rw------- 1 boinc boinc      7745 Oct 11 22:28 heartbeat.json
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc      8192 Oct 11 22:28 boinc_mmap_file
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc        27 Oct 11 22:28 wrapper_checkpoint.txt
[2025-10-11 22:28:50] -rw------- 1 boinc boinc       821 Oct 11 22:28 pilotlog.txt
[2025-10-11 22:28:50] -rw------- 1 boinc boinc   1037199 Oct 11 22:28 log.46676269._042514.job.log.1
[2025-10-11 22:28:50] -rw------- 1 boinc boinc       357 Oct 11 22:28 output.list
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc       620 Oct 11 22:28 runtime_log
[2025-10-11 22:28:50] -rw------- 1 boinc boinc   1341440 Oct 11 22:28 result.tar.gz
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc      8764 Oct 11 22:28 runtime_log.err
[2025-10-11 22:28:50] -rw------- 1 boinc boinc       644 Oct 11 22:28 bIpNDmqJWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz0dNDml4rRTm.diag
[2025-10-11 22:28:50] -rw-r--r-- 1 boinc boinc     21429 Oct 11 22:28 stderr.txt
[2025-10-11 22:28:50] HITS file was successfully produced:
[2025-10-11 22:28:50] -rw------- 1 boinc boinc 194770163 Oct 11 22:27 shared/HITS.pool.root.1
[2025-10-11 22:28:50]  *** Contents of shared directory: ***
[2025-10-11 22:28:50] total 408404
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:29 start_atlas.sh
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:29 input.tar.gz
[2025-10-11 22:28:50] -rw-r--r-- 2 boinc boinc 221488519 Oct 11 20:29 ATLAS.root_0
[2025-10-11 22:28:50] -rw------- 1 boinc boinc 194770163 Oct 11 22:27 HITS.pool.root.1
[2025-10-11 22:28:50] -rw------- 1 boinc boinc   1341440 Oct 11 22:28 result.tar.gz
22:28:52 (816783): run_atlas exited; CPU time 27549.136189
22:28:52 (816783): called boinc_finish(0)

</stderr_txt>
]]>

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