Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:42 (3337563): wrapper (7.7.26015): starting
05:09:42 (3337563): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:09:42] Arguments: --nthreads 4
[2025-10-13 05:09:42] Threads: 4
[2025-10-13 05:09:42] Checking for CVMFS
[2025-10-13 05:09:42] No cvmfs_config command found, will try listing directly
[2025-10-13 05:09:42] CVMFS is ok
[2025-10-13 05:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:09:42] Further information can be found at the LHC@home message board.
[2025-10-13 05:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:09:42] Checking for apptainer binary...
[2025-10-13 05:09:42] which: no apptainer in ((null))
[2025-10-13 05:09:42] apptainer is not installed, using version from CVMFS
[2025-10-13 05:09:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:09:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-13 05:09:42] apptainer works
[2025-10-13 05:09:42] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:09:42] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:09:42] Starting ATLAS job with PandaID=6838634748
[2025-10-13 05:09:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:41:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:41:52] 2025-10-13 05:36:33,532 | INFO     | intersect: -29780772624.385048
[2025-10-13 07:41:52] 2025-10-13 05:36:33,532 | INFO     | chi2: 1.3492863075602572
[2025-10-13 07:41:52] 2025-10-13 05:36:33,533 | INFO     | current chi2=1.3492863075602572 (change=-0.10631584183288356 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,533 | INFO     | right removable region: 138
[2025-10-13 07:41:52] 2025-10-13 05:36:33,533 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | sum of deviations: -3445721030.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | mean x: 1760329543.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | mean y: 2343984.81294964
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | -- intersect: 7286407848.200383
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | intersect: 7286407848.200383
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | chi2: 0.009926011447613037
[2025-10-13 07:41:52] 2025-10-13 05:36:33,534 | INFO     | current chi2=0.009926011447613037 (change=99.2635688723314 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,535 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 07:41:52] 2025-10-13 05:36:33,535 | INFO     | sum of deviations: -3705433227.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,535 | INFO     | mean x: 1760329695.5
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | mean y: 2344402.4776119404
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | -- intersect: 8745422848.083206
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | intersect: 8745422848.083206
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | chi2: 0.004957852609843369
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | current chi2=0.004957852609843369 (change=50.051915253073666 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,536 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,537 | INFO     | sum of deviations: -2591420421.9999995
[2025-10-13 07:41:52] 2025-10-13 05:36:33,537 | INFO     | mean x: 1760329848.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,537 | INFO     | mean y: 2342283.798449612
[2025-10-13 07:41:52] 2025-10-13 05:36:33,537 | INFO     | -- intersect: 6855811614.1261425
[2025-10-13 07:41:52] 2025-10-13 05:36:33,537 | INFO     | intersect: 6855811614.1261425
[2025-10-13 07:41:52] 2025-10-13 05:36:33,538 | INFO     | chi2: 0.0036135065906264625
[2025-10-13 07:41:52] 2025-10-13 05:36:33,538 | INFO     | current chi2=0.0036135065906264625 (change=27.115489810000177 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,538 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | sum of deviations: -1618062179.5
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | mean x: 1760330000.5
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | mean y: 2340293.5887096776
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | -- intersect: 4820420925.531836
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | intersect: 4820420925.531836
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | chi2: 0.0020296481166986887
[2025-10-13 07:41:52] 2025-10-13 05:36:33,539 | INFO     | current chi2=0.0020296481166986887 (change=43.831619901741625 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,540 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,540 | INFO     | sum of deviations: -1320134062.0000002
[2025-10-13 07:41:52] 2025-10-13 05:36:33,540 | INFO     | mean x: 1760330153.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,540 | INFO     | mean y: 2339631.899159664
[2025-10-13 07:41:52] 2025-10-13 05:36:33,540 | INFO     | -- intersect: 4449917149.932405
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | intersect: 4449917149.932405
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | chi2: 0.001993024659929031
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | current chi2=0.001993024659929031 (change=1.804423952523716 %)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | left removable region: 50
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | sum of square deviations: 211285822.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,541 | INFO     | sum of deviations: -54968869.0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | mean x: 1760330732.5
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | mean y: 2334448.7954545454
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | -- intersect: 460308337.03612673
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | intersect: 460308337.03612673
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | chi2: 0.0007497123251496242
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | -- intersect: 460308337.03612673
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | current memory leak: -0.26 B/s (using 88 data points, chi2=0.00)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,542 | INFO     | could have reported an average CPU frequency of 2731 MHz (8 samples)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | ..............................
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . Timing measurements:
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . get job = 0 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . initial setup = 1 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . payload setup = 8 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . stage-in = 0 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . payload execution = 8756 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . stage-out = 0 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | . log creation = 0 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,543 | INFO     | ..............................
[2025-10-13 07:41:52] 2025-10-13 05:36:33,634 | INFO     | 
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | job summary report
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | --------------------------------------------------
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | PanDA job id: 6838634748
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | task id: 46676269
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | errors: (none)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:41:52] 2025-10-13 05:36:33,635 | INFO     | pilot state: finished 
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | transexitcode: 0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | exeerrorcode: 0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | exeerrordiag: 
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | exitcode: 0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | exitmsg: OK
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | cpuconsumptiontime: 33285 s
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | nevents: 400
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | neventsw: 0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | pid: 3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | pgrp: 3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | corecount: 4
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | event service: False
[2025-10-13 07:41:52] 2025-10-13 05:36:33,636 | INFO     | sizes: {0: 2348642, 1: 2348897, 7: 2349159, 12: 2349187, 8768: 2377664, 8769: 2377663, 8770: 2386869, 8772: 2386925, 8780: 2387119}
[2025-10-13 07:41:52] 2025-10-13 05:36:33,637 | INFO     | --------------------------------------------------
[2025-10-13 07:41:52] 2025-10-13 05:36:33,637 | INFO     | 
[2025-10-13 07:41:52] 2025-10-13 05:36:33,637 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-10-13 07:41:52] 2025-10-13 05:36:33,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | job 6838634748 has completed (purged errors)
[2025-10-13 07:41:52] 2025-10-13 05:36:33,665 | INFO     | overall cleanup function is called
[2025-10-13 07:41:52] 2025-10-13 05:36:34,675 | INFO     | --- collectZombieJob: --- 10, [3349559]
[2025-10-13 07:41:52] 2025-10-13 05:36:34,675 | INFO     | zombie collector waiting for pid 3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:34,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:41:52] 2025-10-13 05:36:34,675 | INFO     | collected zombie processes
[2025-10-13 07:41:52] 2025-10-13 05:36:34,675 | INFO     | will attempt to kill all subprocesses of pid=3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:35,279 | INFO     | process IDs to be killed: [3349559] (in reverse order)
[2025-10-13 07:41:52] 2025-10-13 05:36:35,503 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:41:52] 2025-10-13 05:36:35,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:41:52] 2025-10-13 05:36:35,531 | INFO     | did not find any defunct processes belonging to 3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:35,556 | INFO     | did not find any defunct processes belonging to 3349559
[2025-10-13 07:41:52] 2025-10-13 05:36:35,557 | INFO     | ready for new job
[2025-10-13 07:41:52] 2025-10-13 05:36:35,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:41:52] 2025-10-13 05:36:35,559 | INFO     | ***************************************
[2025-10-13 07:41:52] 2025-10-13 05:36:35,559 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:41:52] 2025-10-13 05:36:35,559 | INFO     | ***************************************
[2025-10-13 07:41:52] 2025-10-13 05:36:35,559 | INFO     | 
[2025-10-13 07:41:52] 2025-10-13 05:36:35,567 | INFO     | architecture information:
[2025-10-13 07:41:52] 2025-10-13 05:36:35,567 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:41:52] 2025-10-13 05:36:35,589 | INFO     | cat /etc/os-release:
[2025-10-13 07:41:52] NAME="CentOS Linux"
[2025-10-13 07:41:52] VERSION="7 (Core)"
[2025-10-13 07:41:52] ID="centos"
[2025-10-13 07:41:52] ID_LIKE="rhel fedora"
[2025-10-13 07:41:52] VERSION_ID="7"
[2025-10-13 07:41:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:41:52] ANSI_COLOR="0;31"
[2025-10-13 07:41:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:41:52] HOME_URL="https://www.centos.org/"
[2025-10-13 07:41:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:41:52] 
[2025-10-13 07:41:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:41:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:41:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:41:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:41:52] 
[2025-10-13 07:41:52] 2025-10-13 05:36:35,589 | INFO     | ***************************************
[2025-10-13 07:41:52] 2025-10-13 05:36:36,092 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-10-13 07:41:52] 2025-10-13 05:36:36,118 | INFO     | sufficient remaining disk space (3340258770944 B)
[2025-10-13 07:41:52] 2025-10-13 05:36:36,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:41:52] 2025-10-13 05:36:36,118 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:41:52] 2025-10-13 05:36:36,118 | INFO     | update_server=False
[2025-10-13 07:41:52] 2025-10-13 05:36:36,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:41:52] 2025-10-13 05:36:36,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:41:52] 2025-10-13 05:36:36,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:41:52] 2025-10-13 05:36:36,119 | INFO     | aborting loop
[2025-10-13 07:41:52] 2025-10-13 05:36:36,224 | INFO     | all data control threads have been joined
[2025-10-13 07:41:52] 2025-10-13 05:36:37,122 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,125 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:41:52] 2025-10-13 05:36:37,230 | INFO     | [data] control thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,261 | INFO     | all payload control threads have been joined
[2025-10-13 07:41:52] 2025-10-13 05:36:37,291 | INFO     | [job] validate thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,669 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:37,787 | INFO     | all job control threads have been joined
[2025-10-13 07:41:52] 2025-10-13 05:36:37,832 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,019 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,266 | INFO     | [payload] control thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,282 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,332 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,531 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:38,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:41:52] 2025-10-13 05:36:38,793 | INFO     | [job] control thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:39,147 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:39,651 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:36:40,125 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:41:52] 2025-10-13 05:37:06,765 | INFO     | PID=3341566 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:41:52] 2025-10-13 05:37:06,765 | INFO     | .. there are 4 such processes running
[2025-10-13 07:41:52] 2025-10-13 05:37:06,766 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:41:52] 2025-10-13 05:37:06,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:41:52] 2025-10-13 05:37:06,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:41:52] 2025-10-13 05:37:09,426 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:41:52] 2025-10-13 05:37:10,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23221765883712)>', '<ExcThread(monitor, started 23221524981504)>']
[2025-10-13 07:41:52] 2025-10-13 05:37:10,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:41:52] 2025-10-13 05:37:10,776 | INFO     | [monitor] control thread has ended
[2025-10-13 07:41:52] 2025-10-13 05:37:15,421 | INFO     | all workflow threads have been joined
[2025-10-13 07:41:52] 2025-10-13 05:37:15,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:41:52] 2025-10-13 05:37:15,422 | INFO     | traces error code: 0
[2025-10-13 07:41:52] 2025-10-13 05:37:15,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:41:52] 2025-10-13 05:37:15,567 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:41:52] 2025-10-13 05:37:15,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:41:52] 2025-10-13 05:37:15,575 [wrapper] pilotpid: 3341566
[2025-10-13 07:41:52] 2025-10-13 05:37:15,578 [wrapper] Pilot exit status: 0
[2025-10-13 07:41:52] 2025-10-13 05:37:15,592 [wrapper] pandaids: 6838634748
[2025-10-13 07:41:52] 2025-10-13 05:37:15,742 [wrapper] cleanup supervisor_pilot 3608833 3341567
[2025-10-13 07:41:52] 2025-10-13 05:37:15,747 [wrapper] Test setup, not cleaning
[2025-10-13 07:41:52] 2025-10-13 05:37:15,751 [wrapper] apfmon messages muted
[2025-10-13 07:41:52] 2025-10-13 05:37:15,755 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:41:52] 2025-10-13 05:37:15,758 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:41:52]  *** Error codes and diagnostics ***
[2025-10-13 07:41:52]     "exeErrorCode": 0,
[2025-10-13 07:41:52]     "exeErrorDiag": "",
[2025-10-13 07:41:52]     "pilotErrorCode": 0,
[2025-10-13 07:41:52]     "pilotErrorDiag": "",
[2025-10-13 07:41:52]  *** Listing of results directory ***
[2025-10-13 07:41:52] total 408980
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc      5112 Oct 11 19:33 queuedata.json
[2025-10-13 07:41:52] -rwx------ 1 boinc boinc     36292 Oct 11 19:33 runpilot2-wrapper.sh
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc    557409 Oct 11 19:33 pilot3.tar.gz
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:41:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:09 run_atlas
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:09 job.xml
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc 218195370 Oct 13 05:09 EVNT.46676267._002492.pool.root.1
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc      6688 Oct 13 05:09 init_data.xml
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:09 start_atlas.sh
[2025-10-13 07:41:52] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:09 shared
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:09 input.tar.gz
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:09 boinc_lockfile
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:09 pandaJob.out
[2025-10-13 07:41:52] -rw------- 1 boinc boinc    974373 Oct 13 05:09 agis_schedconf.cvmfs.json
[2025-10-13 07:41:52] -rw------- 1 boinc boinc   1560580 Oct 13 05:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:41:52] drwx------ 5 boinc boinc      4096 Oct 13 05:09 pilot3
[2025-10-13 07:41:52] -rw------- 1 boinc boinc 193533041 Oct 13 07:35 HITS.46676269._062043.pool.root.1
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc       528 Oct 13 07:36 boinc_task_state.xml
[2025-10-13 07:41:52] -rw------- 1 boinc boinc      1024 Oct 13 07:36 memory_monitor_summary.json
[2025-10-13 07:41:52] -rw------- 1 boinc boinc    337752 Oct 13 07:36 log.46676269._062043.job.log.tgz.1
[2025-10-13 07:41:52] -rw------- 1 boinc boinc      7780 Oct 13 07:36 heartbeat.json
[2025-10-13 07:41:52] -rw------- 1 boinc boinc        95 Oct 13 07:37 pilot_heartbeat.json
[2025-10-13 07:41:52] -rw------- 1 boinc boinc      4835 Oct 13 07:37 pilotlog.txt
[2025-10-13 07:41:52] -rw------- 1 boinc boinc   1245295 Oct 13 07:37 log.46676269._062043.job.log.1
[2025-10-13 07:41:52] -rw------- 1 boinc boinc       357 Oct 13 07:37 output.list
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:37 runtime_log
[2025-10-13 07:41:52] -rw------- 1 boinc boinc   1597440 Oct 13 07:37 result.tar.gz
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc      9084 Oct 13 07:37 runtime_log.err
[2025-10-13 07:41:52] -rw------- 1 boinc boinc       662 Oct 13 07:37 bvLMDmxdsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu6gNDmJyGrnn.diag
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc        26 Oct 13 07:41 wrapper_checkpoint.txt
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:41 boinc_mmap_file
[2025-10-13 07:41:52] -rw-r--r-- 1 boinc boinc     20728 Oct 13 07:41 stderr.txt
[2025-10-13 07:41:52] HITS file was successfully produced:
[2025-10-13 07:41:52] -rw------- 1 boinc boinc 193533041 Oct 13 07:35 shared/HITS.pool.root.1
[2025-10-13 07:41:52]  *** Contents of shared directory: ***
[2025-10-13 07:41:52] total 404228
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc 218195370 Oct 13 05:09 ATLAS.root_0
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:09 start_atlas.sh
[2025-10-13 07:41:52] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:09 input.tar.gz
[2025-10-13 07:41:52] -rw------- 1 boinc boinc 193533041 Oct 13 07:35 HITS.pool.root.1
[2025-10-13 07:41:52] -rw------- 1 boinc boinc   1597440 Oct 13 07:37 result.tar.gz
07:41:53 (3337563): run_atlas exited; CPU time 33845.009226
07:41:53 (3337563): called boinc_finish(0)

</stderr_txt>
]]>

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