Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:07 (2959): wrapper (7.7.26015): starting
00:03:07 (2959): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:03:07] Arguments: --nthreads 9
[2025-10-12 00:03:07] Threads: 9
[2025-10-12 00:03:07] Checking for CVMFS
[2025-10-12 00:03:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:12] 2.13.2.0 128451 108647 449880 151606 0 220 38734713 39288832 13458 16776704 0 76698341 99.558 84384076 22054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:03:12] CVMFS is ok
[2025-10-12 00:03:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:12] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:12] Checking for apptainer binary...
[2025-10-12 00:03:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:12] Running /usr/bin/apptainer --version
[2025-10-12 00:03:12] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:13] c-211-30.aglt2.org
[2025-10-12 00:03:13] apptainer works
[2025-10-12 00:03:13] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:03:13] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:03:13] Starting ATLAS job with PandaID=6838633903
[2025-10-12 00:03:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:02:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:02:25] 2025-10-12 20:01:51,108 | INFO     | intersect: -6569107147.388951
[2025-10-12 16:02:25] 2025-10-12 20:01:51,110 | INFO     | chi2: 2.0091085843469076
[2025-10-12 16:02:25] 2025-10-12 20:01:51,110 | INFO     | current chi2=2.0091085843469076 (change=53.52925129167726 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,112 | INFO     | sum of square deviations: 243014937328.2514
[2025-10-12 16:02:25] 2025-10-12 20:01:51,140 | INFO     | sum of deviations: 752083632792.1025
[2025-10-12 16:02:25] 2025-10-12 20:01:51,140 | INFO     | mean x: 1760271161.681128
[2025-10-12 16:02:25] 2025-10-12 20:01:51,140 | INFO     | mean y: 2527554.5173535794
[2025-10-12 16:02:25] 2025-10-12 20:01:51,140 | INFO     | -- intersect: -5445166914.518942
[2025-10-12 16:02:25] 2025-10-12 20:01:51,141 | INFO     | intersect: -5445166914.518942
[2025-10-12 16:02:25] 2025-10-12 20:01:51,142 | INFO     | chi2: 0.8780417070046916
[2025-10-12 16:02:25] 2025-10-12 20:01:51,143 | INFO     | current chi2=0.8780417070046916 (change=56.29695110331166 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,144 | INFO     | sum of square deviations: 239082338116.5876
[2025-10-12 16:02:25] 2025-10-12 20:01:51,168 | INFO     | sum of deviations: 654466334472.1758
[2025-10-12 16:02:25] 2025-10-12 20:01:51,169 | INFO     | mean x: 1760271314.1821156
[2025-10-12 16:02:25] 2025-10-12 20:01:51,169 | INFO     | mean y: 2531340.0229007634
[2025-10-12 16:02:25] 2025-10-12 20:01:51,169 | INFO     | -- intersect: -4816052599.487938
[2025-10-12 16:02:25] 2025-10-12 20:01:51,169 | INFO     | intersect: -4816052599.487938
[2025-10-12 16:02:25] 2025-10-12 20:01:51,171 | INFO     | chi2: 0.5579452945432238
[2025-10-12 16:02:25] 2025-10-12 20:01:51,171 | INFO     | current chi2=0.5579452945432238 (change=36.45571843659101 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,173 | INFO     | sum of square deviations: 235192279480.68332
[2025-10-12 16:02:25] 2025-10-12 20:01:51,195 | INFO     | sum of deviations: 576830460761.8461
[2025-10-12 16:02:25] 2025-10-12 20:01:51,196 | INFO     | mean x: 1760271466.685307
[2025-10-12 16:02:25] 2025-10-12 20:01:51,196 | INFO     | mean y: 2534383.048245614
[2025-10-12 16:02:25] 2025-10-12 20:01:51,196 | INFO     | -- intersect: -4314691520.097996
[2025-10-12 16:02:25] 2025-10-12 20:01:51,196 | INFO     | intersect: -4314691520.097996
[2025-10-12 16:02:25] 2025-10-12 20:01:51,198 | INFO     | chi2: 0.3608393702533821
[2025-10-12 16:02:25] 2025-10-12 20:01:51,198 | INFO     | current chi2=0.3608393702533821 (change=35.327105760647655 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,199 | INFO     | sum of square deviations: 231344862162.25168
[2025-10-12 16:02:25] 2025-10-12 20:01:51,223 | INFO     | sum of deviations: 513675230213.48755
[2025-10-12 16:02:25] 2025-10-12 20:01:51,224 | INFO     | mean x: 1760271619.1841235
[2025-10-12 16:02:25] 2025-10-12 20:01:51,224 | INFO     | mean y: 2536885.8533627344
[2025-10-12 16:02:25] 2025-10-12 20:01:51,224 | INFO     | -- intersect: -3905948138.501814
[2025-10-12 16:02:25] 2025-10-12 20:01:51,224 | INFO     | intersect: -3905948138.501814
[2025-10-12 16:02:25] 2025-10-12 20:01:51,226 | INFO     | chi2: 0.23408550959546573
[2025-10-12 16:02:25] 2025-10-12 20:01:51,226 | INFO     | current chi2=0.23408550959546573 (change=35.127503013019215 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,228 | INFO     | sum of square deviations: 227539742580.0443
[2025-10-12 16:02:25] 2025-10-12 20:01:51,250 | INFO     | sum of deviations: 472047000971.97766
[2025-10-12 16:02:25] 2025-10-12 20:01:51,251 | INFO     | mean x: 1760271771.6807096
[2025-10-12 16:02:25] 2025-10-12 20:01:51,251 | INFO     | mean y: 2538553.659645233
[2025-10-12 16:02:25] 2025-10-12 20:01:51,251 | INFO     | -- intersect: -3649267505.7816086
[2025-10-12 16:02:25] 2025-10-12 20:01:51,251 | INFO     | intersect: -3649267505.7816086
[2025-10-12 16:02:25] 2025-10-12 20:01:51,253 | INFO     | chi2: 0.18480895918240345
[2025-10-12 16:02:25] 2025-10-12 20:01:51,253 | INFO     | current chi2=0.18480895918240345 (change=21.050662425973922 %)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,253 | INFO     | left removable region: 70
[2025-10-12 16:02:25] 2025-10-12 20:01:51,255 | INFO     | sum of square deviations: 197899085557.2426
[2025-10-12 16:02:25] 2025-10-12 20:01:51,275 | INFO     | sum of deviations: 315006203395.99536
[2025-10-12 16:02:25] 2025-10-12 20:01:51,275 | INFO     | mean x: 1760272656.1695702
[2025-10-12 16:02:25] 2025-10-12 20:01:51,276 | INFO     | mean y: 2544561.068524971
[2025-10-12 16:02:25] 2025-10-12 20:01:51,276 | INFO     | -- intersect: -2799372409.89884
[2025-10-12 16:02:25] 2025-10-12 20:01:51,276 | INFO     | intersect: -2799372409.89884
[2025-10-12 16:02:25] 2025-10-12 20:01:51,277 | INFO     | chi2: 0.018587386000379715
[2025-10-12 16:02:25] 2025-10-12 20:01:51,278 | INFO     | -- intersect: -2799372409.89884
[2025-10-12 16:02:25] 2025-10-12 20:01:51,278 | INFO     | current memory leak: 1.59 B/s (using 861 data points, chi2=0.02)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,279 | INFO     | could have reported an average CPU frequency of 2899 MHz (11 samples)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,280 | INFO     | ..............................
[2025-10-12 16:02:25] 2025-10-12 20:01:51,280 | INFO     | . Timing measurements:
[2025-10-12 16:02:25] 2025-10-12 20:01:51,280 | INFO     | . get job = 2 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,280 | INFO     | . initial setup = 16 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,280 | INFO     | . payload setup = 72 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,281 | INFO     | . stage-in = 0 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,281 | INFO     | . payload execution = 57190 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,281 | INFO     | . stage-out = 2 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,281 | INFO     | . log creation = 0 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,281 | INFO     | ..............................
[2025-10-12 16:02:25] 2025-10-12 20:01:51,346 | INFO     | time since job start (57394s) is within the limit (172800.0s)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,426 | INFO     | 
[2025-10-12 16:02:25] 2025-10-12 20:01:51,427 | INFO     | job summary report
[2025-10-12 16:02:25] 2025-10-12 20:01:51,427 | INFO     | --------------------------------------------------
[2025-10-12 16:02:25] 2025-10-12 20:01:51,427 | INFO     | PanDA job id: 6838633903
[2025-10-12 16:02:25] 2025-10-12 20:01:51,427 | INFO     | task id: 46676269
[2025-10-12 16:02:25] 2025-10-12 20:01:51,427 | INFO     | errors: (none)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | pilot state: finished 
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | transexitcode: 0
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | exeerrorcode: 0
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | exeerrordiag: 
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | exitcode: 0
[2025-10-12 16:02:25] 2025-10-12 20:01:51,428 | INFO     | exitmsg: OK
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | cpuconsumptiontime: 81023 s
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | nevents: 400
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | neventsw: 0
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | pid: 28899
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | pgrp: 28899
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | corecount: 9
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | event service: False
[2025-10-12 16:02:25] 2025-10-12 20:01:51,429 | INFO     | sizes: {0: 2348628, 1: 2348684, 3: 2348740, 4: 2348939, 5: 2348939, 16: 2348995, 28: 2349151, 39: 2349179, 51: 2349207, 56: 2349497, 62: 2349525, 57267: 2379396, 5
[2025-10-12 16:02:25] 2025-10-12 20:01:51,430 | INFO     | --------------------------------------------------
[2025-10-12 16:02:25] 2025-10-12 20:01:51,430 | INFO     | 
[2025-10-12 16:02:25] 2025-10-12 20:01:51,430 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:02:25] 2025-10-12 20:01:51,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:02:25] 2025-10-12 20:01:51,456 | INFO     | job 6838633903 has completed (purged errors)
[2025-10-12 16:02:25] 2025-10-12 20:01:51,456 | INFO     | overall cleanup function is called
[2025-10-12 16:02:25] 2025-10-12 20:01:52,466 | INFO     | --- collectZombieJob: --- 10, [28899]
[2025-10-12 16:02:25] 2025-10-12 20:01:52,467 | INFO     | zombie collector waiting for pid 28899
[2025-10-12 16:02:25] 2025-10-12 20:01:52,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:02:25] 2025-10-12 20:01:52,467 | INFO     | collected zombie processes
[2025-10-12 16:02:25] 2025-10-12 20:01:52,467 | INFO     | will attempt to kill all subprocesses of pid=28899
[2025-10-12 16:02:25] 2025-10-12 20:01:52,796 | INFO     | process IDs to be killed: [28899] (in reverse order)
[2025-10-12 16:02:25] 2025-10-12 20:01:52,901 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:02:25] 2025-10-12 20:01:52,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:02:25] 2025-10-12 20:01:52,912 | INFO     | did not find any defunct processes belonging to 28899
[2025-10-12 16:02:25] 2025-10-12 20:01:52,923 | INFO     | did not find any defunct processes belonging to 28899
[2025-10-12 16:02:25] 2025-10-12 20:01:52,923 | INFO     | ready for new job
[2025-10-12 16:02:25] 2025-10-12 20:01:52,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:02:25] 2025-10-12 20:01:52,927 | INFO     | ***************************************
[2025-10-12 16:02:25] 2025-10-12 20:01:52,927 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:02:25] 2025-10-12 20:01:52,927 | INFO     | ***************************************
[2025-10-12 16:02:25] 2025-10-12 20:01:52,927 | INFO     | 
[2025-10-12 16:02:25] 2025-10-12 20:01:52,930 | INFO     | architecture information:
[2025-10-12 16:02:25] 2025-10-12 20:01:52,930 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:02:25] 2025-10-12 20:01:52,947 | INFO     | cat /etc/os-release:
[2025-10-12 16:02:25] NAME="CentOS Linux"
[2025-10-12 16:02:25] VERSION="7 (Core)"
[2025-10-12 16:02:25] ID="centos"
[2025-10-12 16:02:25] ID_LIKE="rhel fedora"
[2025-10-12 16:02:25] VERSION_ID="7"
[2025-10-12 16:02:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:02:25] ANSI_COLOR="0;31"
[2025-10-12 16:02:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:02:25] HOME_URL="https://www.centos.org/"
[2025-10-12 16:02:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:02:25] 
[2025-10-12 16:02:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:02:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:02:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:02:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:02:25] 
[2025-10-12 16:02:25] 2025-10-12 20:01:52,948 | INFO     | ***************************************
[2025-10-12 16:02:25] 2025-10-12 20:01:53,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:02:25] 2025-10-12 20:01:53,473 | INFO     | sufficient remaining disk space (53346304000 B)
[2025-10-12 16:02:25] 2025-10-12 20:01:53,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:02:25] 2025-10-12 20:01:53,474 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:02:25] 2025-10-12 20:01:53,474 | INFO     | update_server=False
[2025-10-12 16:02:25] 2025-10-12 20:01:53,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:02:25] 2025-10-12 20:01:53,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:02:25] 2025-10-12 20:01:53,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:02:25] 2025-10-12 20:01:53,725 | INFO     | all data control threads have been joined
[2025-10-12 16:02:25] 2025-10-12 20:01:53,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:02:25] 2025-10-12 20:01:53,801 | INFO     | aborting loop
[2025-10-12 16:02:25] 2025-10-12 20:01:53,886 | INFO     | all job control threads have been joined
[2025-10-12 16:02:25] 2025-10-12 20:01:54,481 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,731 | INFO     | [data] control thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,808 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,815 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,837 | INFO     | all payload control threads have been joined
[2025-10-12 16:02:25] 2025-10-12 20:01:54,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,891 | INFO     | [job] control thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:54,930 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,019 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,182 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,481 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,564 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,636 | INFO     | [job] validate thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:55,842 | INFO     | [payload] control thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:56,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:02:25] 2025-10-12 20:01:57,454 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:01:57,489 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:02:25] 2025-10-12 20:02:04,782 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:02:25] 2025-10-12 20:02:06,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682415150912)>', '<ExcThread(monitor, started 139681320658688)>']
[2025-10-12 16:02:25] 2025-10-12 20:02:11,166 | INFO     | all workflow threads have been joined
[2025-10-12 16:02:25] 2025-10-12 20:02:11,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:02:25] 2025-10-12 20:02:11,194 | INFO     | traces error code: 0
[2025-10-12 16:02:25] 2025-10-12 20:02:11,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:02:25] 2025-10-12 20:02:24,841 | INFO     | PID=11519 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:02:25] 2025-10-12 20:02:24,841 | INFO     | .. there are 10 such processes running
[2025-10-12 16:02:25] 2025-10-12 20:02:24,841 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:02:25] 2025-10-12 20:02:24,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:02:25] 2025-10-12 20:02:24,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:02:25] 2025-10-12 20:02:24,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:02:25] 2025-10-12 20:02:24,842 | INFO     | [monitor] control thread has ended
[2025-10-12 16:02:25] 2025-10-12 20:02:25,062 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:02:25] 2025-10-12 20:02:25,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:02:25] 2025-10-12 20:02:25,070 [wrapper] pilotpid: 11519
[2025-10-12 16:02:25] 2025-10-12 20:02:25,074 [wrapper] Pilot exit status: 0
[2025-10-12 16:02:25] 2025-10-12 20:02:25,112 [wrapper] pandaids: 6838633903
[2025-10-12 16:02:25] 2025-10-12 20:02:25,214 [wrapper] cleanup supervisor_pilot 1534409 11520
[2025-10-12 16:02:25] 2025-10-12 20:02:25,221 [wrapper] Test setup, not cleaning
[2025-10-12 16:02:25] 2025-10-12 20:02:25,225 [wrapper] apfmon messages muted
[2025-10-12 16:02:25] 2025-10-12 20:02:25,229 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:02:25] 2025-10-12 20:02:25,234 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:02:25]  *** Error codes and diagnostics ***
[2025-10-12 16:02:25]     "exeErrorCode": 0,
[2025-10-12 16:02:25]     "exeErrorDiag": "",
[2025-10-12 16:02:25]     "pilotErrorCode": 0,
[2025-10-12 16:02:25]     "pilotErrorDiag": "",
[2025-10-12 16:02:25]  *** Listing of results directory ***
[2025-10-12 16:02:25] total 417608
[2025-10-12 16:02:25] -rwx------. 1 boincer umatlas     36292 Oct 11 13:07 runpilot2-wrapper.sh
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:07 pilot3.tar.gz
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:07 queuedata.json
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:02:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas 220414798 Oct 12 00:03 EVNT.46676267._002467.pool.root.1
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 16:02:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas    569670 Oct 12 00:03 input.tar.gz
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:03 pandaJob.out
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 16:02:25] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas      6525 Oct 12 15:54 init_data.xml
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas 193787121 Oct 12 16:01 HITS.46676269._061423.pool.root.1
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:01 boinc_task_state.xml
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas      1041 Oct 12 16:01 memory_monitor_summary.json
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas    722073 Oct 12 16:01 log.46676269._061423.job.log.tgz.1
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas        95 Oct 12 16:01 pilot_heartbeat.json
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas      7818 Oct 12 16:01 heartbeat.json
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:02 boinc_mmap_file
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:02 wrapper_checkpoint.txt
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas       821 Oct 12 16:02 pilotlog.txt
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas   4042099 Oct 12 16:02 log.46676269._061423.job.log.1
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas       357 Oct 12 16:02 output.list
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:02 runtime_log
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas   4782080 Oct 12 16:02 result.tar.gz
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 16:02 runtime_log.err
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas       657 Oct 12 16:02 FexKDmwEsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2GSMDmKWCl4n.diag
[2025-10-12 16:02:25] -rw-r--r--. 1 boincer umatlas     21071 Oct 12 16:02 stderr.txt
[2025-10-12 16:02:25] HITS file was successfully produced:
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas 193787121 Oct 12 16:01 shared/HITS.pool.root.1
[2025-10-12 16:02:25]  *** Contents of shared directory: ***
[2025-10-12 16:02:25] total 409752
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas 220414798 Oct 12 00:03 ATLAS.root_0
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 16:02:25] -rw-r--r--. 2 boincer umatlas    569670 Oct 12 00:03 input.tar.gz
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas 193787121 Oct 12 16:01 HITS.pool.root.1
[2025-10-12 16:02:25] -rw-------. 1 boincer umatlas   4782080 Oct 12 16:02 result.tar.gz
16:02:26 (2959): run_atlas exited; CPU time 81904.085370
16:02:26 (2959): called boinc_finish(0)

</stderr_txt>
]]>

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