Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:48 (3477293): wrapper (7.7.26015): starting
00:00:48 (3477293): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:00:48] Arguments: --nthreads 9
[2025-10-12 00:00:48] Threads: 9
[2025-10-12 00:00:48] Checking for CVMFS
[2025-10-12 00:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:00:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:00:53] 2.13.2.0 1969590 128755 282884 151606 0 114 24271069 32935937 29860 16776704 0 90985815 99.692 76873604 29723 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:00:53] CVMFS is ok
[2025-10-12 00:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:00:53] Further information can be found at the LHC@home message board.
[2025-10-12 00:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:00:53] Checking for apptainer binary...
[2025-10-12 00:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:00:53] Running /usr/bin/apptainer --version
[2025-10-12 00:00:53] apptainer version 1.4.3-1.el9
[2025-10-12 00:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:00:55] c-8-36.aglt2.org
[2025-10-12 00:00:55] apptainer works
[2025-10-12 00:00:56] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:00:56] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:00:56] Starting ATLAS job with PandaID=6838851954
[2025-10-12 00:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:35:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:35:18] 2025-10-12 16:34:18,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:35:18] 2025-10-12 16:34:18,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:35:18] 2025-10-12 16:34:18,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:35:18] 2025-10-12 16:34:18,174 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:35:18] 2025-10-12 16:34:18,175 | INFO     | sum of square deviations: 124122132550.16034
[2025-10-12 12:35:18] 2025-10-12 16:34:18,189 | INFO     | sum of deviations: 514803520127.68164
[2025-10-12 12:35:18] 2025-10-12 16:34:18,189 | INFO     | mean x: 1760264353.8127544
[2025-10-12 12:35:18] 2025-10-12 16:34:18,189 | INFO     | mean y: 2119774.0339213028
[2025-10-12 12:35:18] 2025-10-12 16:34:18,189 | INFO     | -- intersect: -7298675556.177428
[2025-10-12 12:35:18] 2025-10-12 16:34:18,189 | INFO     | intersect: -7298675556.177428
[2025-10-12 12:35:18] 2025-10-12 16:34:18,190 | INFO     | chi2: 5.252988612729374
[2025-10-12 12:35:18] 2025-10-12 16:34:18,191 | INFO     | sum of square deviations: 121612958242.47005
[2025-10-12 12:35:18] 2025-10-12 16:34:18,204 | INFO     | sum of deviations: 546663330273.63403
[2025-10-12 12:35:18] 2025-10-12 16:34:18,205 | INFO     | mean x: 1760264201.3169398
[2025-10-12 12:35:18] 2025-10-12 16:34:18,205 | INFO     | mean y: 2121696.2472677594
[2025-10-12 12:35:18] 2025-10-12 16:34:18,205 | INFO     | -- intersect: -7910455255.748375
[2025-10-12 12:35:18] 2025-10-12 16:34:18,205 | INFO     | intersect: -7910455255.748375
[2025-10-12 12:35:18] 2025-10-12 16:34:18,206 | INFO     | chi2: 4.583569971403227
[2025-10-12 12:35:18] 2025-10-12 16:34:18,206 | INFO     | current chi2=4.583569971403227 (change=12.743576860303287 %)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,206 | INFO     | right removable region: 731
[2025-10-12 12:35:18] 2025-10-12 16:34:18,207 | INFO     | sum of square deviations: 121612637686.83447
[2025-10-12 12:35:18] 2025-10-12 16:34:18,221 | INFO     | sum of deviations: 340528742161.3268
[2025-10-12 12:35:18] 2025-10-12 16:34:18,221 | INFO     | mean x: 1760264506.318306
[2025-10-12 12:35:18] 2025-10-12 16:34:18,221 | INFO     | mean y: 2130354.908469945
[2025-10-12 12:35:18] 2025-10-12 16:34:18,221 | INFO     | -- intersect: -4926803591.507311
[2025-10-12 12:35:18] 2025-10-12 16:34:18,221 | INFO     | intersect: -4926803591.507311
[2025-10-12 12:35:18] 2025-10-12 16:34:18,222 | INFO     | chi2: 2.3895763244090187
[2025-10-12 12:35:18] 2025-10-12 16:34:18,223 | INFO     | current chi2=2.3895763244090187 (change=54.510156016359026 %)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,224 | INFO     | sum of square deviations: 119137234870.10999
[2025-10-12 12:35:18] 2025-10-12 16:34:18,237 | INFO     | sum of deviations: 255365342139.18143
[2025-10-12 12:35:18] 2025-10-12 16:34:18,238 | INFO     | mean x: 1760264658.8225584
[2025-10-12 12:35:18] 2025-10-12 16:34:18,238 | INFO     | mean y: 2135599.257221458
[2025-10-12 12:35:18] 2025-10-12 16:34:18,238 | INFO     | -- intersect: -3770913081.500003
[2025-10-12 12:35:18] 2025-10-12 16:34:18,238 | INFO     | intersect: -3770913081.500003
[2025-10-12 12:35:18] 2025-10-12 16:34:18,239 | INFO     | chi2: 1.7562471882780042
[2025-10-12 12:35:18] 2025-10-12 16:34:18,239 | INFO     | current chi2=1.7562471882780042 (change=26.503825371120847 %)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,240 | INFO     | sum of square deviations: 116695734970.16066
[2025-10-12 12:35:18] 2025-10-12 16:34:18,262 | INFO     | sum of deviations: 193309013881.5097
[2025-10-12 12:35:18] 2025-10-12 16:34:18,263 | INFO     | mean x: 1760264811.3240998
[2025-10-12 12:35:18] 2025-10-12 16:34:18,263 | INFO     | mean y: 2139470.476454294
[2025-10-12 12:35:18] 2025-10-12 16:34:18,263 | INFO     | -- intersect: -2913777336.0323052
[2025-10-12 12:35:18] 2025-10-12 16:34:18,263 | INFO     | intersect: -2913777336.0323052
[2025-10-12 12:35:18] 2025-10-12 16:34:18,264 | INFO     | chi2: 1.397053453907189
[2025-10-12 12:35:18] 2025-10-12 16:34:18,264 | INFO     | current chi2=1.397053453907189 (change=20.452345021147263 %)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,264 | INFO     | left removable region: 30
[2025-10-12 12:35:18] 2025-10-12 16:34:18,265 | INFO     | sum of square deviations: 106806021889.35245
[2025-10-12 12:35:18] 2025-10-12 16:34:18,283 | INFO     | sum of deviations: 176630233909.9071
[2025-10-12 12:35:18] 2025-10-12 16:34:18,284 | INFO     | mean x: 1760265085.8202567
[2025-10-12 12:35:18] 2025-10-12 16:34:18,284 | INFO     | mean y: 2144439.6262482167
[2025-10-12 12:35:18] 2025-10-12 16:34:18,284 | INFO     | -- intersect: -2908890241.301888
[2025-10-12 12:35:18] 2025-10-12 16:34:18,284 | INFO     | intersect: -2908890241.301888
[2025-10-12 12:35:18] 2025-10-12 16:34:18,285 | INFO     | chi2: 0.6063362033597604
[2025-10-12 12:35:18] 2025-10-12 16:34:18,285 | INFO     | -- intersect: -2908890241.301888
[2025-10-12 12:35:18] 2025-10-12 16:34:18,285 | INFO     | current memory leak: 1.65 B/s (using 701 data points, chi2=0.61)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,286 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | ..............................
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . Timing measurements:
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . get job = 0 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . initial setup = 7 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . payload setup = 40 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . stage-in = 0 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . payload execution = 44962 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . stage-out = 3 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,287 | INFO     | . log creation = 0 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,288 | INFO     | ..............................
[2025-10-12 12:35:18] 2025-10-12 16:34:18,393 | INFO     | 
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | job summary report
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | --------------------------------------------------
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | PanDA job id: 6838851954
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | task id: 46676269
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | errors: (none)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | pilot state: finished 
[2025-10-12 12:35:18] 2025-10-12 16:34:18,394 | INFO     | transexitcode: 0
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | exeerrorcode: 0
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | exeerrordiag: 
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | exitcode: 0
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | exitmsg: OK
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | cpuconsumptiontime: 49458 s
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | nevents: 400
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | neventsw: 0
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | pid: 3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:18,395 | INFO     | pgrp: 3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | corecount: 9
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | event service: False
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | sizes: {0: 2347978, 1: 2348579, 2: 2348663, 3: 2348691, 4: 2348890, 5: 2348918, 6: 2349102, 17: 2349130, 28: 2349158, 37: 2349448, 39: 2349476, 45007: 2393078, 450
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | --------------------------------------------------
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | 
[2025-10-12 12:35:18] 2025-10-12 16:34:18,396 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:35:18] 2025-10-12 16:34:18,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:35:18] 2025-10-12 16:34:18,418 | INFO     | job 6838851954 has completed (purged errors)
[2025-10-12 12:35:18] 2025-10-12 16:34:18,418 | INFO     | overall cleanup function is called
[2025-10-12 12:35:18] 2025-10-12 16:34:19,429 | INFO     | --- collectZombieJob: --- 10, [3517286]
[2025-10-12 12:35:18] 2025-10-12 16:34:19,430 | INFO     | zombie collector waiting for pid 3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:19,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:35:18] 2025-10-12 16:34:19,430 | INFO     | collected zombie processes
[2025-10-12 12:35:18] 2025-10-12 16:34:19,430 | INFO     | will attempt to kill all subprocesses of pid=3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:20,023 | INFO     | process IDs to be killed: [3517286] (in reverse order)
[2025-10-12 12:35:18] 2025-10-12 16:34:20,269 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:35:18] 2025-10-12 16:34:20,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:35:18] 2025-10-12 16:34:20,290 | INFO     | did not find any defunct processes belonging to 3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:20,306 | INFO     | did not find any defunct processes belonging to 3517286
[2025-10-12 12:35:18] 2025-10-12 16:34:20,306 | INFO     | ready for new job
[2025-10-12 12:35:18] 2025-10-12 16:34:20,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:35:18] 2025-10-12 16:34:20,311 | INFO     | ***************************************
[2025-10-12 12:35:18] 2025-10-12 16:34:20,311 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:35:18] 2025-10-12 16:34:20,311 | INFO     | ***************************************
[2025-10-12 12:35:18] 2025-10-12 16:34:20,312 | INFO     | 
[2025-10-12 12:35:18] 2025-10-12 16:34:20,313 | INFO     | architecture information:
[2025-10-12 12:35:18] 2025-10-12 16:34:20,314 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:35:18] 2025-10-12 16:34:20,334 | INFO     | cat /etc/os-release:
[2025-10-12 12:35:18] NAME="CentOS Linux"
[2025-10-12 12:35:18] VERSION="7 (Core)"
[2025-10-12 12:35:18] ID="centos"
[2025-10-12 12:35:18] ID_LIKE="rhel fedora"
[2025-10-12 12:35:18] VERSION_ID="7"
[2025-10-12 12:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:35:18] ANSI_COLOR="0;31"
[2025-10-12 12:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:35:18] HOME_URL="https://www.centos.org/"
[2025-10-12 12:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:35:18] 
[2025-10-12 12:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:35:18] 
[2025-10-12 12:35:18] 2025-10-12 16:34:20,334 | INFO     | ***************************************
[2025-10-12 12:35:18] 2025-10-12 16:34:20,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:35:18] 2025-10-12 16:34:20,872 | INFO     | sufficient remaining disk space (75652661248 B)
[2025-10-12 12:35:18] 2025-10-12 16:34:20,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:35:18] 2025-10-12 16:34:20,872 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:35:18] 2025-10-12 16:34:20,872 | INFO     | update_server=False
[2025-10-12 12:35:18] 2025-10-12 16:34:20,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:35:18] 2025-10-12 16:34:20,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:35:18] 2025-10-12 16:34:21,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:35:18] 2025-10-12 16:34:21,282 | INFO     | aborting loop
[2025-10-12 12:35:18] 2025-10-12 16:34:21,285 | INFO     | all job control threads have been joined
[2025-10-12 12:35:18] 2025-10-12 16:34:21,440 | INFO     | all payload control threads have been joined
[2025-10-12 12:35:18] 2025-10-12 16:34:21,564 | INFO     | all data control threads have been joined
[2025-10-12 12:35:18] 2025-10-12 16:34:21,878 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:21,948 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,288 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,292 | INFO     | [job] control thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,306 | INFO     | [job] validate thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,447 | INFO     | [payload] control thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,509 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,582 | INFO     | [data] control thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,708 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:22,884 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:23,217 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:23,240 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:23,369 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:23,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:35:18] 2025-10-12 16:34:24,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:35:18] 2025-10-12 16:34:24,427 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:28,288 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:35:18] 2025-10-12 16:34:50,154 | INFO     | PID=3491539 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:35:18] 2025-10-12 16:34:50,155 | INFO     | .. there are 41 such processes running
[2025-10-12 12:35:18] 2025-10-12 16:34:50,155 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:35:18] 2025-10-12 16:34:50,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:35:18] 2025-10-12 16:34:50,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:35:18] 2025-10-12 16:35:11,509 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:35:18] 2025-10-12 16:35:13,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355143849792)>', '<ExcThread(monitor, started 140354791646976)>']
[2025-10-12 12:35:18] 2025-10-12 16:35:13,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:35:18] 2025-10-12 16:35:13,311 | INFO     | [monitor] control thread has ended
[2025-10-12 12:35:18] 2025-10-12 16:35:18,039 | INFO     | all workflow threads have been joined
[2025-10-12 12:35:18] 2025-10-12 16:35:18,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:35:18] 2025-10-12 16:35:18,039 | INFO     | traces error code: 0
[2025-10-12 12:35:18] 2025-10-12 16:35:18,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:35:18] 2025-10-12 16:35:18,420 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:35:18] 2025-10-12 16:35:18,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:35:18] 2025-10-12 16:35:18,435 [wrapper] pilotpid: 3491539
[2025-10-12 12:35:18] 2025-10-12 16:35:18,438 [wrapper] Pilot exit status: 0
[2025-10-12 12:35:18] 2025-10-12 16:35:18,530 [wrapper] pandaids: 6838851954
[2025-10-12 12:35:18] 2025-10-12 16:35:18,658 [wrapper] cleanup supervisor_pilot 1637295 3491540
[2025-10-12 12:35:18] 2025-10-12 16:35:18,661 [wrapper] Test setup, not cleaning
[2025-10-12 12:35:18] 2025-10-12 16:35:18,664 [wrapper] apfmon messages muted
[2025-10-12 12:35:18] 2025-10-12 16:35:18,667 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:35:18] 2025-10-12 16:35:18,674 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:35:18]  *** Error codes and diagnostics ***
[2025-10-12 12:35:18]     "exeErrorCode": 0,
[2025-10-12 12:35:18]     "exeErrorDiag": "",
[2025-10-12 12:35:18]     "pilotErrorCode": 0,
[2025-10-12 12:35:18]     "pilotErrorDiag": "",
[2025-10-12 12:35:18]  *** Listing of results directory ***
[2025-10-12 12:35:18] total 418676
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:58 queuedata.json
[2025-10-12 12:35:18] -rwx------. 1 boincer umatlas     36292 Oct 11 15:59 runpilot2-wrapper.sh
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:59 pilot3.tar.gz
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:35:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas 218845635 Oct 12 00:00 EVNT.46676267._002574.pool.root.1
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 12:35:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:00 shared
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 00:00 input.tar.gz
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:00 boinc_lockfile
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:00 pandaJob.out
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 12:35:18] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 12:30 init_data.xml
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas 194745621 Oct 12 12:33 HITS.46676269._064049.pool.root.1
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:33 boinc_task_state.xml
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas      1042 Oct 12 12:33 memory_monitor_summary.json
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas    816098 Oct 12 12:33 log.46676269._064049.job.log.tgz.1
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas        95 Oct 12 12:34 pilot_heartbeat.json
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas      7824 Oct 12 12:34 heartbeat.json
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:35 boinc_mmap_file
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:35 wrapper_checkpoint.txt
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas      4824 Oct 12 12:35 pilotlog.txt
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas   4797886 Oct 12 12:35 log.46676269._064049.job.log.1
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas       357 Oct 12 12:35 output.list
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:35 runtime_log
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas   5632000 Oct 12 12:35 result.tar.gz
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 12:35 runtime_log.err
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas       656 Oct 12 12:35 8JNMDmKvuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxUSMDm7jeFUm.diag
[2025-10-12 12:35:18] -rw-r--r--. 1 boincer umatlas     21031 Oct 12 12:35 stderr.txt
[2025-10-12 12:35:18] HITS file was successfully produced:
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas 194745621 Oct 12 12:33 shared/HITS.pool.root.1
[2025-10-12 12:35:18]  *** Contents of shared directory: ***
[2025-10-12 12:35:18] total 409984
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas 218845635 Oct 12 00:00 ATLAS.root_0
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 12:35:18] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 00:00 input.tar.gz
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas 194745621 Oct 12 12:33 HITS.pool.root.1
[2025-10-12 12:35:18] -rw-------. 1 boincer umatlas   5632000 Oct 12 12:35 result.tar.gz
12:35:20 (3477293): run_atlas exited; CPU time 51234.218747
12:35:20 (3477293): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN