Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:26 (554296): wrapper (7.7.26015): starting
12:29:26 (554296): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 12:29:26] Arguments: --nthreads 2
[2025-10-12 12:29:26] Threads: 2
[2025-10-12 12:29:26] Checking for CVMFS
[2025-10-12 12:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:29:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:29:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:29:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:29:26] 2.9.2.0 3809310 4150 61584 151617 0 57 26766771 36864001 0 130560 0 2445516 99.988 142337 938 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 12:29:26] CVMFS is ok
[2025-10-12 12:29:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:29:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:29:26] Further information can be found at the LHC@home message board.
[2025-10-12 12:29:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:29:26] Checking for apptainer binary...
[2025-10-12 12:29:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:29:26] Running /usr/bin/apptainer --version
[2025-10-12 12:29:26] apptainer version 1.4.1-1.1
[2025-10-12 12:29:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:29:26] thA366
[2025-10-12 12:29:26] apptainer works
[2025-10-12 12:29:26] Set ATHENA_PROC_NUMBER=2
[2025-10-12 12:29:26] Set ATHENA_CORE_NUMBER=2
[2025-10-12 12:29:26] Starting ATLAS job with PandaID=6838452457
[2025-10-12 12:29:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:41:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:41:04] 2025-10-12 12:38:48,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:41:04] 2025-10-12 12:38:48,992 | INFO     | time since job start (7756s) is within the limit (172800.0s)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,132 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:41:04] 2025-10-12 12:38:50,133 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4605.207375
[2025-10-12 14:41:04] 2025-10-12 12:38:50,134 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838452457/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,135 | INFO     | extracted standard info from prmon json
[2025-10-12 14:41:04] 2025-10-12 12:38:50,135 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:41:04] 2025-10-12 12:38:50,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:41:04] 2025-10-12 12:38:50,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:41:04] 2025-10-12 12:38:50,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | sum of deviations: -18246169025.000004
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | mean x: 1760268834.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | mean y: 2370601.125984252
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | -- intersect: 50571797721.98498
[2025-10-12 14:41:04] 2025-10-12 12:38:50,136 | INFO     | intersect: 50571797721.98498
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | chi2: 1.7418185646531383
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | sum of deviations: -16866880426.500004
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | mean x: 1760268681.5
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | mean y: 2373519.8606557376
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | -- intersect: 52735678610.00531
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | intersect: 52735678610.00531
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | chi2: 1.7366329466159123
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | current chi2=1.7366329466159123 (change=0.29771286989691204 %)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | right removable region: 121
[2025-10-12 14:41:04] 2025-10-12 12:38:50,137 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | sum of deviations: -33292491672.000008
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | mean x: 1760268986.5
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | mean y: 2401615.7540983604
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | -- intersect: 104089427808.6616
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | intersect: 104089427808.6616
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | chi2: 0.2755589573124603
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | current chi2=0.2755589573124603 (change=84.17981281722449 %)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | sum of deviations: -28157164094.000004
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | mean x: 1760269139.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | mean y: 2389813.1025641025
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | -- intersect: 99810010959.35535
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | intersect: 99810010959.35535
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | chi2: 0.2714514909777509
[2025-10-12 14:41:04] 2025-10-12 12:38:50,138 | INFO     | current chi2=0.2714514909777509 (change=1.4905943812422908 %)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | left removable region: 20
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | sum of deviations: -15920923994.000004
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | mean x: 1760269261.0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | mean y: 2364570.287128713
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | -- intersect: 87732218170.35222
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | intersect: 87732218170.35222
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | chi2: 0.23023536584862925
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | -- intersect: 87732218170.35222
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | current memory leak: -49.84 B/s (using 101 data points, chi2=0.23)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | could have reported an average CPU frequency of 4515 MHz (8 samples)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | ..............................
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | . Timing measurements:
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | . get job = 0 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | . initial setup = 1 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,139 | INFO     | . payload setup = 2 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,140 | INFO     | . stage-in = 0 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,140 | INFO     | . payload execution = 7734 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,140 | INFO     | . stage-out = 0 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,140 | INFO     | . log creation = 0 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,140 | INFO     | ..............................
[2025-10-12 14:41:04] 2025-10-12 12:38:50,181 | INFO     | PID=557996 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | 
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | job summary report
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | --------------------------------------------------
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | PanDA job id: 6838452457
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | task id: 46676269
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | errors: (none)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | pilot state: finished 
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | transexitcode: 0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | exeerrorcode: 0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | exeerrordiag: 
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | exitcode: 0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | exitmsg: OK
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | cpuconsumptiontime: 15052 s
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | nevents: 400
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | neventsw: 0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | pid: 564404
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | pgrp: 564404
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | corecount: 2
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | event service: False
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | sizes: {0: 2348859, 1: 2348859, 3: 2349149, 11: 2349177, 7740: 2376943, 7741: 2386130, 7743: 2386130, 7745: 2386324}
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | --------------------------------------------------
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | 
[2025-10-12 14:41:04] 2025-10-12 12:38:50,191 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:41:04] 2025-10-12 12:38:50,202 | INFO     | job 6838452457 has completed (purged errors)
[2025-10-12 14:41:04] 2025-10-12 12:38:50,203 | INFO     | overall cleanup function is called
[2025-10-12 14:41:04] 2025-10-12 12:38:51,208 | INFO     | --- collectZombieJob: --- 10, [564404]
[2025-10-12 14:41:04] 2025-10-12 12:38:51,208 | INFO     | zombie collector waiting for pid 564404
[2025-10-12 14:41:04] 2025-10-12 12:38:51,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:41:04] 2025-10-12 12:38:51,208 | INFO     | collected zombie processes
[2025-10-12 14:41:04] 2025-10-12 12:38:51,208 | INFO     | will attempt to kill all subprocesses of pid=564404
[2025-10-12 14:41:04] 2025-10-12 12:38:51,244 | INFO     | process IDs to be killed: [564404] (in reverse order)
[2025-10-12 14:41:04] 2025-10-12 12:38:51,261 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:41:04] 2025-10-12 12:38:51,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:41:04] 2025-10-12 12:38:51,262 | INFO     | did not find any defunct processes belonging to 564404
[2025-10-12 14:41:04] 2025-10-12 12:38:51,263 | INFO     | did not find any defunct processes belonging to 564404
[2025-10-12 14:41:04] 2025-10-12 12:38:51,263 | INFO     | ready for new job
[2025-10-12 14:41:04] 2025-10-12 12:38:51,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | ***************************************
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | ***************************************
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | 
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | architecture information:
[2025-10-12 14:41:04] 2025-10-12 12:38:51,264 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:41:04] 2025-10-12 12:38:51,273 | INFO     | cat /etc/os-release:
[2025-10-12 14:41:04] NAME="CentOS Linux"
[2025-10-12 14:41:04] VERSION="7 (Core)"
[2025-10-12 14:41:04] ID="centos"
[2025-10-12 14:41:04] ID_LIKE="rhel fedora"
[2025-10-12 14:41:04] VERSION_ID="7"
[2025-10-12 14:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:41:04] ANSI_COLOR="0;31"
[2025-10-12 14:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:41:04] HOME_URL="https://www.centos.org/"
[2025-10-12 14:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:41:04] 
[2025-10-12 14:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:41:04] 
[2025-10-12 14:41:04] 2025-10-12 12:38:51,273 | INFO     | ***************************************
[2025-10-12 14:41:04] 2025-10-12 12:38:51,775 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | INFO     | sufficient remaining disk space (497065918464 B)
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | INFO     | update_server=False
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:41:04] 2025-10-12 12:38:51,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:41:04] 2025-10-12 12:38:51,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:41:04] 2025-10-12 12:38:52,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:41:04] 2025-10-12 12:38:52,058 | INFO     | aborting loop
[2025-10-12 14:41:04] 2025-10-12 12:38:52,114 | INFO     | all job control threads have been joined
[2025-10-12 14:41:04] 2025-10-12 12:38:52,671 | INFO     | all data control threads have been joined
[2025-10-12 14:41:04] 2025-10-12 12:38:52,790 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:52,791 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:52,822 | INFO     | [job] validate thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:52,862 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:52,917 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,063 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,119 | INFO     | [job] control thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,126 | INFO     | all payload control threads have been joined
[2025-10-12 14:41:04] 2025-10-12 12:38:53,276 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,609 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,676 | INFO     | [data] control thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,791 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:53,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:41:04] 2025-10-12 12:38:53,914 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:54,131 | INFO     | [payload] control thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:54,340 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:38:57,803 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:39:02,706 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:41:04] 2025-10-12 12:39:03,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:41:04] 2025-10-12 12:39:22,285 | INFO     | PID=557996 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 14:41:04] 2025-10-12 12:39:22,285 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:41:04] 2025-10-12 12:39:22,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:41:04] 2025-10-12 12:39:22,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:41:04] 2025-10-12 12:39:44,081 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:41:04] 2025-10-12 12:39:44,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441358440256)>', '<ExcThread(monitor, started 140440724563712)>']
[2025-10-12 14:41:04] 2025-10-12 12:39:45,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:41:04] 2025-10-12 12:39:45,391 | INFO     | [monitor] control thread has ended
[2025-10-12 14:41:04] 2025-10-12 12:39:49,459 | INFO     | all workflow threads have been joined
[2025-10-12 14:41:04] 2025-10-12 12:39:49,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:41:04] 2025-10-12 12:39:49,460 | INFO     | traces error code: 0
[2025-10-12 14:41:04] 2025-10-12 12:39:49,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:41:04] 2025-10-12 12:39:49,501 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:41:04] 2025-10-12 12:39:49,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:41:04] 2025-10-12 12:39:49,506 [wrapper] pilotpid: 557996
[2025-10-12 14:41:04] 2025-10-12 12:39:49,508 [wrapper] Pilot exit status: 0
[2025-10-12 14:41:04] 2025-10-12 12:39:49,514 [wrapper] pandaids: 6838452457
[2025-10-12 14:41:04] 2025-10-12 12:39:49,527 [wrapper] cleanup supervisor_pilot  579121 557997
[2025-10-12 14:41:04] 2025-10-12 12:39:49,529 [wrapper] Test setup, not cleaning
[2025-10-12 14:41:04] 2025-10-12 12:39:49,532 [wrapper] apfmon messages muted
[2025-10-12 14:41:04] 2025-10-12 12:39:49,534 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:41:04] 2025-10-12 12:39:49,536 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:41:04]  *** Error codes and diagnostics ***
[2025-10-12 14:41:04]     "exeErrorCode": 0,
[2025-10-12 14:41:04]     "exeErrorDiag": "",
[2025-10-12 14:41:04]     "pilotErrorCode": 0,
[2025-10-12 14:41:04]     "pilotErrorDiag": "",
[2025-10-12 14:41:04]  *** Listing of results directory ***
[2025-10-12 14:41:04] total 408488
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:51 pilot3.tar.gz
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 15:38 queuedata.json
[2025-10-12 14:41:04] -rwx------ 1 boinc boinc     36292 Oct 11 15:39 runpilot2-wrapper.sh
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:41:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:29 run_atlas
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:29 job.xml
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc 219565661 Oct 12 12:29 EVNT.46676267._002345.pool.root.1
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc    569683 Oct 12 12:29 input.tar.gz
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 14:41:04] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:29 shared
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:29 boinc_setup_complete
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc      6207 Oct 12 12:29 init_data.xml
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:29 boinc_lockfile
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc      2549 Oct 12 12:29 pandaJob.out
[2025-10-12 14:41:04] -rw------- 1 boinc boinc    975520 Oct 12 12:29 agis_schedconf.cvmfs.json
[2025-10-12 14:41:04] -rw------- 1 boinc boinc   1560580 Oct 12 12:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:41:04] drwx------ 5 boinc boinc      4096 Oct 12 12:29 pilot3
[2025-10-12 14:41:04] -rw------- 1 boinc boinc 192034914 Oct 12 14:38 HITS.46676269._058485.pool.root.1
[2025-10-12 14:41:04] -rw------- 1 boinc boinc      1017 Oct 12 14:38 memory_monitor_summary.json
[2025-10-12 14:41:04] -rw------- 1 boinc boinc    281223 Oct 12 14:38 log.46676269._058485.job.log.tgz.1
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:38 boinc_task_state.xml
[2025-10-12 14:41:04] -rw------- 1 boinc boinc      7757 Oct 12 14:38 heartbeat.json
[2025-10-12 14:41:04] -rw------- 1 boinc boinc        95 Oct 12 14:39 pilot_heartbeat.json
[2025-10-12 14:41:04] -rw------- 1 boinc boinc      4823 Oct 12 14:39 pilotlog.txt
[2025-10-12 14:41:04] -rw------- 1 boinc boinc   1113975 Oct 12 14:39 log.46676269._058485.job.log.1
[2025-10-12 14:41:04] -rw------- 1 boinc boinc       357 Oct 12 14:39 output.list
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:39 runtime_log
[2025-10-12 14:41:04] -rw------- 1 boinc boinc   1413120 Oct 12 14:39 result.tar.gz
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc      8777 Oct 12 14:39 runtime_log.err
[2025-10-12 14:41:04] -rw------- 1 boinc boinc       660 Oct 12 14:39 fnpLDm6zoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjyRMDmpOWYkm.diag
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:41 boinc_mmap_file
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:41 wrapper_checkpoint.txt
[2025-10-12 14:41:04] -rw-r--r-- 1 boinc boinc     21196 Oct 12 14:41 stderr.txt
[2025-10-12 14:41:04] HITS file was successfully produced:
[2025-10-12 14:41:04] -rw------- 1 boinc boinc 192034914 Oct 12 14:38 shared/HITS.pool.root.1
[2025-10-12 14:41:04]  *** Contents of shared directory: ***
[2025-10-12 14:41:04] total 403920
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc 219565661 Oct 12 12:29 ATLAS.root_0
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc    569683 Oct 12 12:29 input.tar.gz
[2025-10-12 14:41:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 14:41:04] -rw------- 1 boinc boinc 192034914 Oct 12 14:38 HITS.pool.root.1
[2025-10-12 14:41:04] -rw------- 1 boinc boinc   1413120 Oct 12 14:39 result.tar.gz
14:41:06 (554296): run_atlas exited; CPU time 15088.471495
14:41:06 (554296): called boinc_finish(0)

</stderr_txt>
]]>

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