Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:03 (29642): wrapper (7.7.26015): starting
18:12:03 (29642): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:12:03] Arguments: --nthreads 8
[2025-10-11 18:12:03] Threads: 8
[2025-10-11 18:12:03] Checking for CVMFS
[2025-10-11 18:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:12:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:12:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:12:03] 2.11.2.0 2885 204927 79276 151598 0 56 11363406 20275201 1 130560 1 73000595 99.977 10482765 9952 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:12:03] CVMFS is ok
[2025-10-11 18:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:12:03] Further information can be found at the LHC@home message board.
[2025-10-11 18:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:12:03] Checking for apptainer binary...
[2025-10-11 18:12:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:12:03] Running /usr/bin/apptainer --version
[2025-10-11 18:12:03] apptainer version 1.3.2-1.el7
[2025-10-11 18:12:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:12:05] c-204-6.aglt2.org
[2025-10-11 18:12:05] apptainer works
[2025-10-11 18:12:05] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:12:05] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:12:05] Starting ATLAS job with PandaID=6838454866
[2025-10-11 18:12:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:17:42]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:17:42] 2025-10-12 00:16:41,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:17:42] 2025-10-12 00:16:41,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:17:42] 2025-10-12 00:16:41,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:17:42] 2025-10-12 00:16:41,276 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:17:42] 2025-10-12 00:16:41,277 | INFO     | sum of square deviations: 563026370.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,277 | INFO     | sum of deviations: 17822312111.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,278 | INFO     | mean x: 1760224466.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,278 | INFO     | mean y: 2472971.524590164
[2025-10-11 20:17:42] 2025-10-12 00:16:41,278 | INFO     | -- intersect: -55716533226.21702
[2025-10-11 20:17:42] 2025-10-12 00:16:41,278 | INFO     | intersect: -55716533226.21702
[2025-10-11 20:17:42] 2025-10-12 00:16:41,278 | INFO     | chi2: 1.4128015081346226
[2025-10-11 20:17:42] 2025-10-12 00:16:41,279 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,279 | INFO     | sum of deviations: 17430373996.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | mean x: 1760224314.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | mean y: 2472050.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | -- intersect: -61780733730.811554
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | intersect: -61780733730.811554
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | chi2: 1.4121723169539409
[2025-10-11 20:17:42] 2025-10-12 00:16:41,280 | INFO     | current chi2=1.4121723169539409 (change=0.04453500205506339 %)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,281 | INFO     | right removable region: 116
[2025-10-11 20:17:42] 2025-10-12 00:16:41,281 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,281 | INFO     | sum of deviations: -385873495.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | mean x: 1760224619.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | mean y: 2514068.5555555555
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | -- intersect: 1370270473.7446265
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | intersect: 1370270473.7446265
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | chi2: 0.03420809947819761
[2025-10-11 20:17:42] 2025-10-12 00:16:41,282 | INFO     | current chi2=0.03420809947819761 (change=97.5787044902462 %)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,283 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,283 | INFO     | sum of deviations: -2553059443.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,283 | INFO     | mean x: 1760224771.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,284 | INFO     | mean y: 2519359.2946428573
[2025-10-11 20:17:42] 2025-10-12 00:16:41,284 | INFO     | -- intersect: 10318990943.279171
[2025-10-11 20:17:42] 2025-10-12 00:16:41,284 | INFO     | intersect: 10318990943.279171
[2025-10-11 20:17:42] 2025-10-12 00:16:41,284 | INFO     | chi2: 0.0037057058821279598
[2025-10-11 20:17:42] 2025-10-12 00:16:41,284 | INFO     | current chi2=0.0037057058821279598 (change=89.16716818924776 %)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,285 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,285 | INFO     | sum of deviations: -2534486071.9999995
[2025-10-11 20:17:42] 2025-10-12 00:16:41,285 | INFO     | mean x: 1760224924.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,285 | INFO     | mean y: 2519303.9345794395
[2025-10-11 20:17:42] 2025-10-12 00:16:41,285 | INFO     | -- intersect: 11747877141.26817
[2025-10-11 20:17:42] 2025-10-12 00:16:41,286 | INFO     | intersect: 11747877141.26817
[2025-10-11 20:17:42] 2025-10-12 00:16:41,286 | INFO     | chi2: 0.003387945407542202
[2025-10-11 20:17:42] 2025-10-12 00:16:41,286 | INFO     | current chi2=0.003387945407542202 (change=8.574897325723198 %)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,286 | INFO     | left removable region: 30
[2025-10-11 20:17:42] 2025-10-12 00:16:41,286 | INFO     | sum of square deviations: 197203697.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | sum of deviations: -1590416522.0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | mean x: 1760225198.5
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | mean y: 2518705.8604651163
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | -- intersect: 14198455565.183954
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | intersect: 14198455565.183954
[2025-10-11 20:17:42] 2025-10-12 00:16:41,287 | INFO     | chi2: 0.0023985787839528234
[2025-10-11 20:17:42] 2025-10-12 00:16:41,288 | INFO     | -- intersect: 14198455565.183954
[2025-10-11 20:17:42] 2025-10-12 00:16:41,288 | INFO     | current memory leak: -8.06 B/s (using 86 data points, chi2=0.00)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,288 | INFO     | could have reported an average CPU frequency of 1966 MHz (8 samples)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,288 | INFO     | ..............................
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . Timing measurements:
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . get job = 0 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . initial setup = 2 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . payload setup = 8 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . stage-in = 0 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . payload execution = 7414 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . stage-out = 0 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | . log creation = 0 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,289 | INFO     | ..............................
[2025-10-11 20:17:42] 2025-10-12 00:16:41,686 | INFO     | 
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | job summary report
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | --------------------------------------------------
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | PanDA job id: 6838454866
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | task id: 46676269
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | errors: (none)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:17:42] 2025-10-12 00:16:41,688 | INFO     | pilot state: finished 
[2025-10-11 20:17:42] 2025-10-12 00:16:41,688 | INFO     | transexitcode: 0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,688 | INFO     | exeerrorcode: 0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,688 | INFO     | exeerrordiag: 
[2025-10-11 20:17:42] 2025-10-12 00:16:41,688 | INFO     | exitcode: 0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | exitmsg: OK
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | cpuconsumptiontime: 55380 s
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | nevents: 400
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | neventsw: 0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | pid: 7493
[2025-10-11 20:17:42] 2025-10-12 00:16:41,689 | INFO     | pgrp: 7493
[2025-10-11 20:17:42] 2025-10-12 00:16:41,690 | INFO     | corecount: 8
[2025-10-11 20:17:42] 2025-10-12 00:16:41,690 | INFO     | event service: False
[2025-10-11 20:17:42] 2025-10-12 00:16:41,690 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7426: 2376563, 7428: 2385561, 7431: 2385745, 7439: 2385939}
[2025-10-11 20:17:42] 2025-10-12 00:16:41,690 | INFO     | --------------------------------------------------
[2025-10-11 20:17:42] 2025-10-12 00:16:41,690 | INFO     | 
[2025-10-11 20:17:42] 2025-10-12 00:16:41,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 20:17:42] 2025-10-12 00:16:41,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:17:42] 2025-10-12 00:16:41,724 | INFO     | job 6838454866 has completed (purged errors)
[2025-10-11 20:17:42] 2025-10-12 00:16:41,724 | INFO     | overall cleanup function is called
[2025-10-11 20:17:42] 2025-10-12 00:16:42,377 | INFO     | PID=940 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-11 20:17:42] 2025-10-12 00:16:42,733 | INFO     | --- collectZombieJob: --- 10, [7493]
[2025-10-11 20:17:42] 2025-10-12 00:16:42,733 | INFO     | zombie collector waiting for pid 7493
[2025-10-11 20:17:42] 2025-10-12 00:16:42,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:17:42] 2025-10-12 00:16:42,733 | INFO     | collected zombie processes
[2025-10-11 20:17:42] 2025-10-12 00:16:42,733 | INFO     | will attempt to kill all subprocesses of pid=7493
[2025-10-11 20:17:42] 2025-10-12 00:16:42,825 | INFO     | process IDs to be killed: [7493] (in reverse order)
[2025-10-11 20:17:42] 2025-10-12 00:16:42,885 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:17:42] 2025-10-12 00:16:42,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:17:42] 2025-10-12 00:16:42,891 | INFO     | did not find any defunct processes belonging to 7493
[2025-10-11 20:17:42] 2025-10-12 00:16:42,895 | INFO     | did not find any defunct processes belonging to 7493
[2025-10-11 20:17:42] 2025-10-12 00:16:42,895 | INFO     | ready for new job
[2025-10-11 20:17:42] 2025-10-12 00:16:42,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:17:42] 2025-10-12 00:16:42,897 | INFO     | ***************************************
[2025-10-11 20:17:42] 2025-10-12 00:16:42,897 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:17:42] 2025-10-12 00:16:42,897 | INFO     | ***************************************
[2025-10-11 20:17:42] 2025-10-12 00:16:42,897 | INFO     | 
[2025-10-11 20:17:42] 2025-10-12 00:16:42,898 | INFO     | architecture information:
[2025-10-11 20:17:42] 2025-10-12 00:16:42,898 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:17:42] 2025-10-12 00:16:42,917 | INFO     | cat /etc/os-release:
[2025-10-11 20:17:42] NAME="CentOS Linux"
[2025-10-11 20:17:42] VERSION="7 (Core)"
[2025-10-11 20:17:42] ID="centos"
[2025-10-11 20:17:42] ID_LIKE="rhel fedora"
[2025-10-11 20:17:42] VERSION_ID="7"
[2025-10-11 20:17:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:17:42] ANSI_COLOR="0;31"
[2025-10-11 20:17:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:17:42] HOME_URL="https://www.centos.org/"
[2025-10-11 20:17:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:17:42] 
[2025-10-11 20:17:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:17:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:17:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:17:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:17:42] 
[2025-10-11 20:17:42] 2025-10-12 00:16:42,918 | INFO     | ***************************************
[2025-10-11 20:17:42] 2025-10-12 00:16:43,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 20:17:42] 2025-10-12 00:16:43,442 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-11 20:17:42] 2025-10-12 00:16:43,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:17:42] 2025-10-12 00:16:43,442 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:17:42] 2025-10-12 00:16:43,443 | INFO     | update_server=False
[2025-10-11 20:17:42] 2025-10-12 00:16:43,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:17:42] 2025-10-12 00:16:43,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:17:42] 2025-10-12 00:16:43,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:17:42] 2025-10-12 00:16:43,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:17:42] 2025-10-12 00:16:43,803 | INFO     | aborting loop
[2025-10-11 20:17:42] 2025-10-12 00:16:43,806 | INFO     | all data control threads have been joined
[2025-10-11 20:17:42] 2025-10-12 00:16:44,102 | INFO     | all job control threads have been joined
[2025-10-11 20:17:42] 2025-10-12 00:16:44,444 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:44,595 | INFO     | all payload control threads have been joined
[2025-10-11 20:17:42] 2025-10-12 00:16:44,710 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:44,808 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:44,812 | INFO     | [data] control thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,107 | INFO     | [job] control thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,441 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,449 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,601 | INFO     | [payload] control thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,826 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,836 | INFO     | [job] validate thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,855 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,859 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:45,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:46,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:17:42] 2025-10-12 00:16:47,399 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:16:47,451 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:17:42] 2025-10-12 00:17:14,576 | INFO     | PID=940 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-11 20:17:42] 2025-10-12 00:17:14,578 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:17:42] 2025-10-12 00:17:14,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:17:42] 2025-10-12 00:17:14,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:17:42] 2025-10-12 00:17:35,633 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:17:42] 2025-10-12 00:17:37,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506664503104)>', '<ExcThread(monitor, started 140506080204544)>']
[2025-10-11 20:17:42] 2025-10-12 00:17:37,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:17:42] 2025-10-12 00:17:37,679 | INFO     | [monitor] control thread has ended
[2025-10-11 20:17:42] 2025-10-12 00:17:42,550 | INFO     | all workflow threads have been joined
[2025-10-11 20:17:42] 2025-10-12 00:17:42,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:17:42] 2025-10-12 00:17:42,551 | INFO     | traces error code: 0
[2025-10-11 20:17:42] 2025-10-12 00:17:42,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:17:42] 2025-10-12 00:17:42,690 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:17:42] 2025-10-12 00:17:42,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:17:42] 2025-10-12 00:17:42,700 [wrapper] pilotpid: 940
[2025-10-11 20:17:42] 2025-10-12 00:17:42,704 [wrapper] Pilot exit status: 0
[2025-10-11 20:17:42] 2025-10-12 00:17:42,723 [wrapper] pandaids: 6838454866
[2025-10-11 20:17:42] 2025-10-12 00:17:42,788 [wrapper] cleanup supervisor_pilot  5488 941
[2025-10-11 20:17:42] 2025-10-12 00:17:42,793 [wrapper] Test setup, not cleaning
[2025-10-11 20:17:42] 2025-10-12 00:17:42,798 [wrapper] apfmon messages muted
[2025-10-11 20:17:42] 2025-10-12 00:17:42,803 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:17:42] 2025-10-12 00:17:42,809 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:17:42]  *** Error codes and diagnostics ***
[2025-10-11 20:17:42]     "exeErrorCode": 0,
[2025-10-11 20:17:42]     "exeErrorDiag": "",
[2025-10-11 20:17:42]     "pilotErrorCode": 0,
[2025-10-11 20:17:42]     "pilotErrorDiag": "",
[2025-10-11 20:17:42]  *** Listing of results directory ***
[2025-10-11 20:17:42] total 411968
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 20:17:42] -rwx------ 1 boincer umatlas     36292 Oct 11 10:53 runpilot2-wrapper.sh
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 10:53 queuedata.json
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas       100 Oct 11 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:17:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 18:12 run_atlas
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas       105 Oct 11 18:12 job.xml
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas 221066963 Oct 11 18:12 EVNT.46676267._002405.pool.root.1
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:12 start_atlas.sh
[2025-10-11 20:17:42] drwxrwx--x 2 boincer umatlas      4096 Oct 11 18:12 shared
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 18:12 input.tar.gz
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas         0 Oct 11 18:12 boinc_lockfile
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 18:12 pandaJob.out
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas    975528 Oct 11 18:12 agis_schedconf.cvmfs.json
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas   1560580 Oct 11 18:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:17:42] drwx------ 5 boincer umatlas      4096 Oct 11 18:12 pilot3
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 20:10 init_data.xml
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas 194074771 Oct 11 20:15 HITS.46676269._059552.pool.root.1
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas       530 Oct 11 20:16 boinc_task_state.xml
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas      1052 Oct 11 20:16 memory_monitor_summary.json
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas    355444 Oct 11 20:16 log.46676269._059552.job.log.tgz.1
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas      7849 Oct 11 20:16 heartbeat.json
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas        95 Oct 11 20:17 pilot_heartbeat.json
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 20:17 boinc_mmap_file
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas        27 Oct 11 20:17 wrapper_checkpoint.txt
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas      4744 Oct 11 20:17 pilotlog.txt
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas   1050449 Oct 11 20:17 log.46676269._059552.job.log.1
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas       357 Oct 11 20:17 output.list
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas       620 Oct 11 20:17 runtime_log
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas   1423360 Oct 11 20:17 result.tar.gz
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas      8698 Oct 11 20:17 runtime_log.err
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas       658 Oct 11 20:17 CHLMDms9pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmv5RMDmuUhhin.diag
[2025-10-11 20:17:42] -rw-r--r-- 1 boincer umatlas     20966 Oct 11 20:17 stderr.txt
[2025-10-11 20:17:42] HITS file was successfully produced:
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas 194074771 Oct 11 20:15 shared/HITS.pool.root.1
[2025-10-11 20:17:42]  *** Contents of shared directory: ***
[2025-10-11 20:17:42] total 407388
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas 221066963 Oct 11 18:12 ATLAS.root_0
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:12 start_atlas.sh
[2025-10-11 20:17:42] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 18:12 input.tar.gz
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas 194074771 Oct 11 20:15 HITS.pool.root.1
[2025-10-11 20:17:42] -rw------- 1 boincer umatlas   1423360 Oct 11 20:17 result.tar.gz
20:17:44 (29642): run_atlas exited; CPU time 55324.571411
20:17:44 (29642): called boinc_finish(0)

</stderr_txt>
]]>

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