Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:41 (8070): wrapper (7.7.26015): starting
18:09:41 (8070): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:09:41] Arguments: --nthreads 8
[2025-10-11 18:09:41] Threads: 8
[2025-10-11 18:09:41] Checking for CVMFS
[2025-10-11 18:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:09:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:09:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:09:42] 2.11.2.0 16446 52006 130892 151597 1 188 13369675 18432000 1833 130560 0 45914026 99.974 2226555 38052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 18:09:42] CVMFS is ok
[2025-10-11 18:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:09:42] Further information can be found at the LHC@home message board.
[2025-10-11 18:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:09:42] Checking for apptainer binary...
[2025-10-11 18:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:09:42] Running /usr/bin/apptainer --version
[2025-10-11 18:09:42] apptainer version 1.3.2-1.el7
[2025-10-11 18:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:09:42] c-206-26.aglt2.org
[2025-10-11 18:09:42] apptainer works
[2025-10-11 18:09:42] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:09:42] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:09:42] Starting ATLAS job with PandaID=6838453104
[2025-10-11 18:09:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:01:16]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:01:16] 2025-10-12 01:00:18,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:01:16] 2025-10-12 01:00:18,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:01:16] 2025-10-12 01:00:18,753 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:01:16] 2025-10-12 01:00:18,753 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,754 | INFO     | sum of deviations: 12100703284.999998
[2025-10-11 21:01:16] 2025-10-12 01:00:18,754 | INFO     | mean x: 1760225713.5
[2025-10-11 21:01:16] 2025-10-12 01:00:18,754 | INFO     | mean y: 2448012.976190476
[2025-10-11 21:01:16] 2025-10-12 01:00:18,754 | INFO     | -- intersect: -14484873266.758823
[2025-10-11 21:01:16] 2025-10-12 01:00:18,754 | INFO     | intersect: -14484873266.758823
[2025-10-11 21:01:16] 2025-10-12 01:00:18,755 | INFO     | chi2: 2.2401268459443915
[2025-10-11 21:01:16] 2025-10-12 01:00:18,755 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | sum of deviations: 22962925095.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | mean x: 1760225561.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | mean y: 2460685.8957055216
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | -- intersect: -30097826656.44968
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | intersect: -30097826656.44968
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | chi2: 1.4139676375105228
[2025-10-11 21:01:16] 2025-10-12 01:00:18,756 | INFO     | current chi2=1.4139676375105228 (change=36.88001909041793 %)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,757 | INFO     | sum of square deviations: 1223016419.5
[2025-10-11 21:01:16] 2025-10-12 01:00:18,757 | INFO     | sum of deviations: 22244549994.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,757 | INFO     | mean x: 1760225408.5
[2025-10-11 21:01:16] 2025-10-12 01:00:18,757 | INFO     | mean y: 2459771.8481012657
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | -- intersect: -32012991105.00525
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | intersect: -32012991105.00525
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | chi2: 1.414920752880812
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | current chi2=1.414920752880812 (change=-0.06740715593515205 %)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | right removable region: 157
[2025-10-11 21:01:16] 2025-10-12 01:00:18,758 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,759 | INFO     | sum of deviations: -12595237178.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,759 | INFO     | mean x: 1760225866.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,759 | INFO     | mean y: 2477185.2576687117
[2025-10-11 21:01:16] 2025-10-12 01:00:18,759 | INFO     | -- intersect: 16512583033.085413
[2025-10-11 21:01:16] 2025-10-12 01:00:18,760 | INFO     | intersect: 16512583033.085413
[2025-10-11 21:01:16] 2025-10-12 01:00:18,760 | INFO     | chi2: 0.8823069193395778
[2025-10-11 21:01:16] 2025-10-12 01:00:18,760 | INFO     | current chi2=0.8823069193395778 (change=60.61352860723316 %)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,760 | INFO     | sum of square deviations: 1223016419.5
[2025-10-11 21:01:16] 2025-10-12 01:00:18,761 | INFO     | sum of deviations: -15066529995.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,761 | INFO     | mean x: 1760226018.5
[2025-10-11 21:01:16] 2025-10-12 01:00:18,761 | INFO     | mean y: 2480273.2151898732
[2025-10-11 21:01:16] 2025-10-12 01:00:18,761 | INFO     | -- intersect: 21686979093.396137
[2025-10-11 21:01:16] 2025-10-12 01:00:18,761 | INFO     | intersect: 21686979093.396137
[2025-10-11 21:01:16] 2025-10-12 01:00:18,762 | INFO     | chi2: 0.8555659733585477
[2025-10-11 21:01:16] 2025-10-12 01:00:18,762 | INFO     | current chi2=0.8555659733585477 (change=3.030798625159398 %)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,762 | INFO     | left removable region: 20
[2025-10-11 21:01:16] 2025-10-12 01:00:18,762 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | sum of deviations: -3875832273.9999995
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | mean x: 1760225988.0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | mean y: 2494979.576642336
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | -- intersect: 8559394208.1530485
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | intersect: 8559394208.1530485
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | chi2: 0.0037976067861204355
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | -- intersect: 8559394208.1530485
[2025-10-11 21:01:16] 2025-10-12 01:00:18,763 | INFO     | current memory leak: -4.86 B/s (using 137 data points, chi2=0.00)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | could have reported an average CPU frequency of 2498 MHz (9 samples)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | ..............................
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . Timing measurements:
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . get job = 0 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . initial setup = 2 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . payload setup = 5 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . stage-in = 0 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,764 | INFO     | . payload execution = 10195 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,765 | INFO     | . stage-out = 1 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,765 | INFO     | . log creation = 0 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,765 | INFO     | ..............................
[2025-10-11 21:01:16] 2025-10-12 01:00:18,841 | INFO     | 
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | job summary report
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | --------------------------------------------------
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | PanDA job id: 6838453104
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | task id: 46676269
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | errors: (none)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | pilot state: finished 
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | transexitcode: 0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | exeerrorcode: 0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | exeerrordiag: 
[2025-10-11 21:01:16] 2025-10-12 01:00:18,842 | INFO     | exitcode: 0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | exitmsg: OK
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | cpuconsumptiontime: 77767 s
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | nevents: 400
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | neventsw: 0
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | pid: 19105
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | pgrp: 19105
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | corecount: 8
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | event service: False
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | sizes: {0: 2348685, 1: 2348884, 2: 2348884, 5: 2349174, 12: 2349230, 10204: 2377932, 10205: 2386986, 10209: 2387188}
[2025-10-11 21:01:16] 2025-10-12 01:00:18,843 | INFO     | --------------------------------------------------
[2025-10-11 21:01:16] 2025-10-12 01:00:18,844 | INFO     | 
[2025-10-11 21:01:16] 2025-10-12 01:00:18,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 21:01:16] 2025-10-12 01:00:18,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:01:16] 2025-10-12 01:00:18,860 | INFO     | job 6838453104 has completed (purged errors)
[2025-10-11 21:01:16] 2025-10-12 01:00:18,860 | INFO     | overall cleanup function is called
[2025-10-11 21:01:16] 2025-10-12 01:00:19,867 | INFO     | --- collectZombieJob: --- 10, [19105]
[2025-10-11 21:01:16] 2025-10-12 01:00:19,867 | INFO     | zombie collector waiting for pid 19105
[2025-10-11 21:01:16] 2025-10-12 01:00:19,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:01:16] 2025-10-12 01:00:19,867 | INFO     | collected zombie processes
[2025-10-11 21:01:16] 2025-10-12 01:00:19,867 | INFO     | will attempt to kill all subprocesses of pid=19105
[2025-10-11 21:01:16] 2025-10-12 01:00:19,978 | INFO     | process IDs to be killed: [19105] (in reverse order)
[2025-10-11 21:01:16] 2025-10-12 01:00:20,016 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:01:16] 2025-10-12 01:00:20,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:01:16] 2025-10-12 01:00:20,019 | INFO     | did not find any defunct processes belonging to 19105
[2025-10-11 21:01:16] 2025-10-12 01:00:20,022 | INFO     | did not find any defunct processes belonging to 19105
[2025-10-11 21:01:16] 2025-10-12 01:00:20,022 | INFO     | ready for new job
[2025-10-11 21:01:16] 2025-10-12 01:00:20,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:01:16] 2025-10-12 01:00:20,023 | INFO     | ***************************************
[2025-10-11 21:01:16] 2025-10-12 01:00:20,023 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:01:16] 2025-10-12 01:00:20,023 | INFO     | ***************************************
[2025-10-11 21:01:16] 2025-10-12 01:00:20,023 | INFO     | 
[2025-10-11 21:01:16] 2025-10-12 01:00:20,024 | INFO     | architecture information:
[2025-10-11 21:01:16] 2025-10-12 01:00:20,025 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:01:16] 2025-10-12 01:00:20,035 | INFO     | cat /etc/os-release:
[2025-10-11 21:01:16] NAME="CentOS Linux"
[2025-10-11 21:01:16] VERSION="7 (Core)"
[2025-10-11 21:01:16] ID="centos"
[2025-10-11 21:01:16] ID_LIKE="rhel fedora"
[2025-10-11 21:01:16] VERSION_ID="7"
[2025-10-11 21:01:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:01:16] ANSI_COLOR="0;31"
[2025-10-11 21:01:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:01:16] HOME_URL="https://www.centos.org/"
[2025-10-11 21:01:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:01:16] 
[2025-10-11 21:01:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:01:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:01:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:01:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:01:16] 
[2025-10-11 21:01:16] 2025-10-12 01:00:20,035 | INFO     | ***************************************
[2025-10-11 21:01:16] 2025-10-12 01:00:20,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | INFO     | sufficient remaining disk space (27844935680 B)
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | INFO     | update_server=False
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:01:16] 2025-10-12 01:00:20,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:01:16] 2025-10-12 01:00:20,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:01:16] 2025-10-12 01:00:20,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:01:16] 2025-10-12 01:00:20,549 | INFO     | aborting loop
[2025-10-11 21:01:16] 2025-10-12 01:00:20,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:01:16] 2025-10-12 01:00:21,117 | INFO     | all data control threads have been joined
[2025-10-11 21:01:16] 2025-10-12 01:00:21,185 | INFO     | all job control threads have been joined
[2025-10-11 21:01:16] 2025-10-12 01:00:21,554 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:21,554 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:21,554 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:21,630 | INFO     | all payload control threads have been joined
[2025-10-11 21:01:16] 2025-10-12 01:00:21,712 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:21,712 | INFO     | [job] validate thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:21,971 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,123 | INFO     | [data] control thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,191 | INFO     | [job] control thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,233 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,554 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,598 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,635 | INFO     | [payload] control thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:22,840 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:23,114 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:24,914 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:31,228 | INFO     | job.realtimelogging is not enabled
[2025-10-11 21:01:16] 2025-10-12 01:00:32,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:01:16] 2025-10-12 01:00:51,003 | INFO     | PID=11741 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 21:01:16] 2025-10-12 01:00:51,003 | INFO     | .. there are 3 such processes running
[2025-10-11 21:01:16] 2025-10-12 01:00:51,004 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:01:16] 2025-10-12 01:00:51,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:01:16] 2025-10-12 01:00:51,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:01:16] 2025-10-12 01:01:10,215 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:01:16] 2025-10-12 01:01:10,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803776980800)>', '<ExcThread(monitor, started 139803047745280)>']
[2025-10-11 21:01:16] 2025-10-12 01:01:11,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:01:16] 2025-10-12 01:01:11,094 | INFO     | [monitor] control thread has ended
[2025-10-11 21:01:16] 2025-10-12 01:01:16,012 | INFO     | all workflow threads have been joined
[2025-10-11 21:01:16] 2025-10-12 01:01:16,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:01:16] 2025-10-12 01:01:16,013 | INFO     | traces error code: 0
[2025-10-11 21:01:16] 2025-10-12 01:01:16,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:01:16] 2025-10-12 01:01:16,127 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:01:16] 2025-10-12 01:01:16,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:01:16] 2025-10-12 01:01:16,131 [wrapper] pilotpid: 11741
[2025-10-11 21:01:16] 2025-10-12 01:01:16,133 [wrapper] Pilot exit status: 0
[2025-10-11 21:01:16] 2025-10-12 01:01:16,141 [wrapper] pandaids: 6838453104
[2025-10-11 21:01:16] 2025-10-12 01:01:16,168 [wrapper] cleanup supervisor_pilot 20624 11742
[2025-10-11 21:01:16] 2025-10-12 01:01:16,171 [wrapper] Test setup, not cleaning
[2025-10-11 21:01:16] 2025-10-12 01:01:16,173 [wrapper] apfmon messages muted
[2025-10-11 21:01:16] 2025-10-12 01:01:16,175 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:01:16] 2025-10-12 01:01:16,177 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:01:16]  *** Error codes and diagnostics ***
[2025-10-11 21:01:16]     "exeErrorCode": 0,
[2025-10-11 21:01:16]     "exeErrorDiag": "",
[2025-10-11 21:01:16]     "pilotErrorCode": 0,
[2025-10-11 21:01:16]     "pilotErrorDiag": "",
[2025-10-11 21:01:16]  *** Listing of results directory ***
[2025-10-11 21:01:16] total 406552
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 10:01 pilot3.tar.gz
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 10:02 queuedata.json
[2025-10-11 21:01:16] -rwx------ 1 boincer umatlas     36292 Oct 11 10:03 runpilot2-wrapper.sh
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas       100 Oct 11 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:01:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 18:09 run_atlas
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas       105 Oct 11 18:09 job.xml
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas 221435817 Oct 11 18:09 EVNT.46676267._002365.pool.root.1
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 18:09 input.tar.gz
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:09 start_atlas.sh
[2025-10-11 21:01:16] drwxrwx--x 2 boincer umatlas      4096 Oct 11 18:09 shared
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas         0 Oct 11 18:09 boinc_lockfile
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 18:09 pandaJob.out
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas    975528 Oct 11 18:09 agis_schedconf.cvmfs.json
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas   1560580 Oct 11 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:01:16] drwx------ 5 boincer umatlas      4096 Oct 11 18:09 pilot3
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 20:54 init_data.xml
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas 187255341 Oct 11 20:59 HITS.46676269._058968.pool.root.1
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas       530 Oct 11 20:59 boinc_task_state.xml
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas      1054 Oct 11 21:00 memory_monitor_summary.json
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas    415457 Oct 11 21:00 log.46676269._058968.job.log.tgz.1
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas      7857 Oct 11 21:00 heartbeat.json
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas        95 Oct 11 21:00 pilot_heartbeat.json
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas        28 Oct 11 21:01 wrapper_checkpoint.txt
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 21:01 boinc_mmap_file
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas      4893 Oct 11 21:01 pilotlog.txt
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas   1438821 Oct 11 21:01 log.46676269._058968.job.log.1
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas       357 Oct 11 21:01 output.list
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas       620 Oct 11 21:01 runtime_log
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas   1873920 Oct 11 21:01 result.tar.gz
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 21:01 runtime_log.err
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas       661 Oct 11 21:01 RJINDmxMpR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmk1RMDmGhso7n.diag
[2025-10-11 21:01:16] -rw-r--r-- 1 boincer umatlas     20864 Oct 11 21:01 stderr.txt
[2025-10-11 21:01:16] HITS file was successfully produced:
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas 187255341 Oct 11 20:59 shared/HITS.pool.root.1
[2025-10-11 21:01:16]  *** Contents of shared directory: ***
[2025-10-11 21:01:16] total 401532
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas 221435817 Oct 11 18:09 ATLAS.root_0
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 18:09 input.tar.gz
[2025-10-11 21:01:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 18:09 start_atlas.sh
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas 187255341 Oct 11 20:59 HITS.pool.root.1
[2025-10-11 21:01:16] -rw------- 1 boincer umatlas   1873920 Oct 11 21:01 result.tar.gz
21:01:18 (8070): run_atlas exited; CPU time 77885.206545
21:01:18 (8070): called boinc_finish(0)

</stderr_txt>
]]>

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