Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:34 (2165990): wrapper (7.7.26015): starting
18:40:34 (2165990): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:40:34] Arguments: --nthreads 8
[2025-10-11 18:40:34] Threads: 8
[2025-10-11 18:40:34] Checking for CVMFS
[2025-10-11 18:40:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:40:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:40:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:40:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:40:36] 2.13.2.0 136315 21932 239032 151599 0 470 20985596 40960001 18499 16776704 0 56773419 99.704 49362769 32419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 18:40:36] CVMFS is ok
[2025-10-11 18:40:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:40:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:40:36] Further information can be found at the LHC@home message board.
[2025-10-11 18:40:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:40:36] Checking for apptainer binary...
[2025-10-11 18:40:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:40:36] Running /usr/bin/apptainer --version
[2025-10-11 18:40:36] apptainer version 1.4.3-1.el9
[2025-10-11 18:40:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:40:36] c6-8-12-2.aglt2.org
[2025-10-11 18:40:36] apptainer works
[2025-10-11 18:40:36] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:40:36] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:40:36] Starting ATLAS job with PandaID=6838633877
[2025-10-11 18:40:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:01:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:01:43] 2025-10-12 10:01:08,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:01:43] 2025-10-12 10:01:08,844 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:01:43] 2025-10-12 10:01:08,845 | INFO     | sum of square deviations: 92011954627.13647
[2025-10-12 06:01:43] 2025-10-12 10:01:08,853 | INFO     | sum of deviations: -26922763390.562332
[2025-10-12 06:01:43] 2025-10-12 10:01:08,854 | INFO     | mean x: 1760242900.311844
[2025-10-12 06:01:43] 2025-10-12 10:01:08,854 | INFO     | mean y: 2508874.2863568217
[2025-10-12 06:01:43] 2025-10-12 10:01:08,854 | INFO     | -- intersect: 517557199.3334196
[2025-10-12 06:01:43] 2025-10-12 10:01:08,854 | INFO     | intersect: 517557199.3334196
[2025-10-12 06:01:43] 2025-10-12 10:01:08,855 | INFO     | chi2: 4.076371018373674
[2025-10-12 06:01:43] 2025-10-12 10:01:08,856 | INFO     | sum of square deviations: 89958202814.1462
[2025-10-12 06:01:43] 2025-10-12 10:01:08,864 | INFO     | sum of deviations: 99653896531.3476
[2025-10-12 06:01:43] 2025-10-12 10:01:08,864 | INFO     | mean x: 1760242747.8141994
[2025-10-12 06:01:43] 2025-10-12 10:01:08,864 | INFO     | mean y: 2518244.580060423
[2025-10-12 06:01:43] 2025-10-12 10:01:08,864 | INFO     | -- intersect: -1947443439.5493903
[2025-10-12 06:01:43] 2025-10-12 10:01:08,864 | INFO     | intersect: -1947443439.5493903
[2025-10-12 06:01:43] 2025-10-12 10:01:08,865 | INFO     | chi2: 1.9986200233129392
[2025-10-12 06:01:43] 2025-10-12 10:01:08,865 | INFO     | current chi2=1.9986200233129392 (change=50.970605612088846 %)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,866 | INFO     | sum of square deviations: 87935242276.14917
[2025-10-12 06:01:43] 2025-10-12 10:01:08,874 | INFO     | sum of deviations: 98009060250.42928
[2025-10-12 06:01:43] 2025-10-12 10:01:08,875 | INFO     | mean x: 1760242595.3165905
[2025-10-12 06:01:43] 2025-10-12 10:01:08,875 | INFO     | mean y: 2518120.584474886
[2025-10-12 06:01:43] 2025-10-12 10:01:08,875 | INFO     | -- intersect: -1959376998.0754592
[2025-10-12 06:01:43] 2025-10-12 10:01:08,875 | INFO     | intersect: -1959376998.0754592
[2025-10-12 06:01:43] 2025-10-12 10:01:08,876 | INFO     | chi2: 1.9987320560915474
[2025-10-12 06:01:43] 2025-10-12 10:01:08,876 | INFO     | current chi2=1.9987320560915474 (change=-0.005605506664666305 %)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,876 | INFO     | right removable region: 656
[2025-10-12 06:01:43] 2025-10-12 10:01:08,877 | INFO     | sum of square deviations: 89958075934.1462
[2025-10-12 06:01:43] 2025-10-12 10:01:08,884 | INFO     | sum of deviations: -160728083753.79904
[2025-10-12 06:01:43] 2025-10-12 10:01:08,885 | INFO     | mean x: 1760243052.8141994
[2025-10-12 06:01:43] 2025-10-12 10:01:08,885 | INFO     | mean y: 2518785.7658610274
[2025-10-12 06:01:43] 2025-10-12 10:01:08,885 | INFO     | -- intersect: 3147544842.4244704
[2025-10-12 06:01:43] 2025-10-12 10:01:08,885 | INFO     | intersect: 3147544842.4244704
[2025-10-12 06:01:43] 2025-10-12 10:01:08,886 | INFO     | chi2: 2.2338092689415534
[2025-10-12 06:01:43] 2025-10-12 10:01:08,886 | INFO     | current chi2=2.2338092689415534 (change=45.20103153336707 %)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,887 | INFO     | sum of square deviations: 87935028897.78085
[2025-10-12 06:01:43] 2025-10-12 10:01:08,895 | INFO     | sum of deviations: -163754141346.80826
[2025-10-12 06:01:43] 2025-10-12 10:01:08,895 | INFO     | mean x: 1760243205.3150685
[2025-10-12 06:01:43] 2025-10-12 10:01:08,895 | INFO     | mean y: 2519008.404870624
[2025-10-12 06:01:43] 2025-10-12 10:01:08,895 | INFO     | -- intersect: 3280474542.859659
[2025-10-12 06:01:43] 2025-10-12 10:01:08,895 | INFO     | intersect: 3280474542.859659
[2025-10-12 06:01:43] 2025-10-12 10:01:08,896 | INFO     | chi2: 2.205911973758297
[2025-10-12 06:01:43] 2025-10-12 10:01:08,896 | INFO     | current chi2=2.205911973758297 (change=1.2488664798349112 %)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,896 | INFO     | left removable region: 20
[2025-10-12 06:01:43] 2025-10-12 10:01:08,897 | INFO     | sum of square deviations: 79769765732.59665
[2025-10-12 06:01:43] 2025-10-12 10:01:08,905 | INFO     | sum of deviations: -9543839272.103775
[2025-10-12 06:01:43] 2025-10-12 10:01:08,905 | INFO     | mean x: 1760243174.808176
[2025-10-12 06:01:43] 2025-10-12 10:01:08,905 | INFO     | mean y: 2526212.212264151
[2025-10-12 06:01:43] 2025-10-12 10:01:08,905 | INFO     | -- intersect: 213125776.92080212
[2025-10-12 06:01:43] 2025-10-12 10:01:08,905 | INFO     | intersect: 213125776.92080212
[2025-10-12 06:01:43] 2025-10-12 10:01:08,906 | INFO     | chi2: 0.07479777983348765
[2025-10-12 06:01:43] 2025-10-12 10:01:08,906 | INFO     | -- intersect: 213125776.92080212
[2025-10-12 06:01:43] 2025-10-12 10:01:08,906 | INFO     | current memory leak: -0.12 B/s (using 636 data points, chi2=0.07)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | could have reported an average CPU frequency of 2713 MHz (26 samples)
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | ..............................
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | . Timing measurements:
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | . get job = 0 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | . initial setup = 3 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | . payload setup = 43 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,909 | INFO     | . stage-in = 0 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,910 | INFO     | . payload execution = 40679 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,910 | INFO     | . stage-out = 6 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,910 | INFO     | . log creation = 2 s
[2025-10-12 06:01:43] 2025-10-12 10:01:08,910 | INFO     | ..............................
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | 
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | job summary report
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | --------------------------------------------------
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | PanDA job id: 6838633877
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | task id: 46676269
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | errors: (none)
[2025-10-12 06:01:43] 2025-10-12 10:01:09,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | pilot state: finished 
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | transexitcode: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | exeerrorcode: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | exeerrordiag: 
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | exitcode: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | exitmsg: OK
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | cpuconsumptiontime: 47174 s
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | nevents: 400
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | neventsw: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | pid: 2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | pgrp: 2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | corecount: 8
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | event service: False
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | sizes: {0: 2348022, 1: 2348878, 2: 2348878, 12: 2348906, 15: 2349196, 23: 2349224, 40726: 2391813, 40727: 2391812, 40735: 2400866, 40737: 2400922, 40757: 2401116}
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | --------------------------------------------------
[2025-10-12 06:01:43] 2025-10-12 10:01:09,076 | INFO     | 
[2025-10-12 06:01:43] 2025-10-12 10:01:09,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 06:01:43] 2025-10-12 10:01:09,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | job 6838633877 has completed (purged errors)
[2025-10-12 06:01:43] 2025-10-12 10:01:09,147 | INFO     | overall cleanup function is called
[2025-10-12 06:01:43] 2025-10-12 10:01:10,163 | INFO     | PID=2169817 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:01:43] 2025-10-12 10:01:10,163 | INFO     | .. there are 24 such processes running
[2025-10-12 06:01:43] 2025-10-12 10:01:10,164 | INFO     | --- collectZombieJob: --- 10, [2177597]
[2025-10-12 06:01:43] 2025-10-12 10:01:10,164 | INFO     | zombie collector waiting for pid 2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:10,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:01:43] 2025-10-12 10:01:10,164 | INFO     | collected zombie processes
[2025-10-12 06:01:43] 2025-10-12 10:01:10,164 | INFO     | will attempt to kill all subprocesses of pid=2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:10,483 | INFO     | process IDs to be killed: [2177597] (in reverse order)
[2025-10-12 06:01:43] 2025-10-12 10:01:10,599 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:01:43] 2025-10-12 10:01:10,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:01:43] 2025-10-12 10:01:10,613 | INFO     | did not find any defunct processes belonging to 2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:10,628 | INFO     | did not find any defunct processes belonging to 2177597
[2025-10-12 06:01:43] 2025-10-12 10:01:10,628 | INFO     | ready for new job
[2025-10-12 06:01:43] 2025-10-12 10:01:10,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:01:43] 2025-10-12 10:01:10,633 | INFO     | ***************************************
[2025-10-12 06:01:43] 2025-10-12 10:01:10,633 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:01:43] 2025-10-12 10:01:10,633 | INFO     | ***************************************
[2025-10-12 06:01:43] 2025-10-12 10:01:10,633 | INFO     | 
[2025-10-12 06:01:43] 2025-10-12 10:01:10,636 | INFO     | architecture information:
[2025-10-12 06:01:43] 2025-10-12 10:01:10,637 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:01:43] 2025-10-12 10:01:10,654 | INFO     | cat /etc/os-release:
[2025-10-12 06:01:43] NAME="CentOS Linux"
[2025-10-12 06:01:43] VERSION="7 (Core)"
[2025-10-12 06:01:43] ID="centos"
[2025-10-12 06:01:43] ID_LIKE="rhel fedora"
[2025-10-12 06:01:43] VERSION_ID="7"
[2025-10-12 06:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:01:43] ANSI_COLOR="0;31"
[2025-10-12 06:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:01:43] HOME_URL="https://www.centos.org/"
[2025-10-12 06:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:01:43] 
[2025-10-12 06:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:01:43] 
[2025-10-12 06:01:43] 2025-10-12 10:01:10,654 | INFO     | ***************************************
[2025-10-12 06:01:43] 2025-10-12 10:01:11,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 06:01:43] 2025-10-12 10:01:11,236 | INFO     | sufficient remaining disk space (73545023488 B)
[2025-10-12 06:01:43] 2025-10-12 10:01:11,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:01:43] 2025-10-12 10:01:11,237 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:01:43] 2025-10-12 10:01:11,237 | INFO     | update_server=False
[2025-10-12 06:01:43] 2025-10-12 10:01:11,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:01:43] 2025-10-12 10:01:11,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:01:43] 2025-10-12 10:01:11,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:01:43] 2025-10-12 10:01:11,265 | INFO     | aborting loop
[2025-10-12 06:01:43] 2025-10-12 10:01:11,382 | INFO     | all data control threads have been joined
[2025-10-12 06:01:43] 2025-10-12 10:01:12,134 | INFO     | all job control threads have been joined
[2025-10-12 06:01:43] 2025-10-12 10:01:12,243 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:12,244 | INFO     | all payload control threads have been joined
[2025-10-12 06:01:43] 2025-10-12 10:01:12,271 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:12,390 | INFO     | [data] control thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:12,717 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:12,720 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:12,952 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,022 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,107 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,140 | INFO     | [job] control thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,250 | INFO     | [payload] control thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,277 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,417 | INFO     | [job] validate thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:13,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:01:43] 2025-10-12 10:01:13,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:14,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:01:43] 2025-10-12 10:01:15,117 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:17,546 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:01:43] 2025-10-12 10:01:22,374 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:01:43] 2025-10-12 10:01:23,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708068476736)>', '<ExcThread(monitor, started 139707400828672)>']
[2025-10-12 06:01:43] 2025-10-12 10:01:28,656 | INFO     | all workflow threads have been joined
[2025-10-12 06:01:43] 2025-10-12 10:01:28,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:01:43] 2025-10-12 10:01:28,658 | INFO     | traces error code: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:28,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:01:43] 2025-10-12 10:01:42,644 | INFO     | PID=2169817 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:01:43] 2025-10-12 10:01:42,645 | INFO     | .. there are 24 such processes running
[2025-10-12 06:01:43] 2025-10-12 10:01:42,646 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:01:43] 2025-10-12 10:01:42,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:01:43] 2025-10-12 10:01:42,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:01:43] 2025-10-12 10:01:42,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:01:43] 2025-10-12 10:01:42,646 | INFO     | [monitor] control thread has ended
[2025-10-12 06:01:43] 2025-10-12 10:01:42,887 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:01:43] 2025-10-12 10:01:42,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:01:43] 2025-10-12 10:01:42,918 [wrapper] pilotpid: 2169817
[2025-10-12 06:01:43] 2025-10-12 10:01:42,921 [wrapper] Pilot exit status: 0
[2025-10-12 06:01:43] 2025-10-12 10:01:42,969 [wrapper] pandaids: 6838633877
[2025-10-12 06:01:43] 2025-10-12 10:01:43,121 [wrapper] cleanup supervisor_pilot 3872109 2169818
[2025-10-12 06:01:43] 2025-10-12 10:01:43,151 [wrapper] Test setup, not cleaning
[2025-10-12 06:01:43] 2025-10-12 10:01:43,155 [wrapper] apfmon messages muted
[2025-10-12 06:01:43] 2025-10-12 10:01:43,158 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:01:43] 2025-10-12 10:01:43,161 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:01:43]  *** Error codes and diagnostics ***
[2025-10-12 06:01:43]     "exeErrorCode": 0,
[2025-10-12 06:01:43]     "exeErrorDiag": "",
[2025-10-12 06:01:43]     "pilotErrorCode": 0,
[2025-10-12 06:01:43]     "pilotErrorDiag": "",
[2025-10-12 06:01:43]  *** Listing of results directory ***
[2025-10-12 06:01:43] total 417696
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 12:20 pilot3.tar.gz
[2025-10-12 06:01:43] -rwx------. 1 boincer umatlas     36292 Oct 11 13:01 runpilot2-wrapper.sh
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:01 queuedata.json
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:01:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:40 run_atlas
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:40 job.xml
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas 223092905 Oct 11 18:40 EVNT.46676267._002466.pool.root.1
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 18:40 input.tar.gz
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:40 start_atlas.sh
[2025-10-12 06:01:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:40 shared
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:40 boinc_lockfile
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas      2546 Oct 11 18:40 pandaJob.out
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas    975520 Oct 11 18:41 agis_schedconf.cvmfs.json
[2025-10-12 06:01:43] drwx------. 5 boincer umatlas      4096 Oct 11 18:41 pilot3
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas 189357751 Oct 12 05:57 HITS.46676269._061397.pool.root.1
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:57 boinc_task_state.xml
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas      1047 Oct 12 06:00 memory_monitor_summary.json
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas    764842 Oct 12 06:00 log.46676269._061397.job.log.tgz.1
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas      7831 Oct 12 06:01 heartbeat.json
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 06:01 init_data.xml
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:01 boinc_mmap_file
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:01 wrapper_checkpoint.txt
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas        95 Oct 12 06:01 pilot_heartbeat.json
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas       823 Oct 12 06:01 pilotlog.txt
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas   4920942 Oct 12 06:01 log.46676269._061397.job.log.1
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas       357 Oct 12 06:01 output.list
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:01 runtime_log
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas   5703680 Oct 12 06:01 result.tar.gz
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas       660 Oct 12 06:01 X5KMDm18rR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1GSMDmwRANin.diag
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 06:01 runtime_log.err
[2025-10-12 06:01:43] -rw-r--r--. 1 boincer umatlas     20903 Oct 12 06:01 stderr.txt
[2025-10-12 06:01:43] HITS file was successfully produced:
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas 189357751 Oct 12 05:57 shared/HITS.pool.root.1
[2025-10-12 06:01:43]  *** Contents of shared directory: ***
[2025-10-12 06:01:43] total 408940
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas 223092905 Oct 11 18:40 ATLAS.root_0
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 18:40 input.tar.gz
[2025-10-12 06:01:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:40 start_atlas.sh
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas 189357751 Oct 12 05:57 HITS.pool.root.1
[2025-10-12 06:01:43] -rw-------. 1 boincer umatlas   5703680 Oct 12 06:01 result.tar.gz
06:01:44 (2165990): run_atlas exited; CPU time 48566.472334
06:01:44 (2165990): called boinc_finish(0)

</stderr_txt>
]]>

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