Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:47:09 (1481580): wrapper (7.7.26015): starting
12:47:09 (1481580): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 12:47:09] Arguments: --nthreads 4
[2025-10-12 12:47:09] Threads: 4
[2025-10-12 12:47:09] Checking for CVMFS
[2025-10-12 12:47:09] No cvmfs_config command found, will try listing directly
[2025-10-12 12:47:09] CVMFS is ok
[2025-10-12 12:47:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:47:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:47:09] Further information can be found at the LHC@home message board.
[2025-10-12 12:47:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:47:09] Checking for apptainer binary...
[2025-10-12 12:47:09] which: no apptainer in ((null))
[2025-10-12 12:47:09] apptainer is not installed, using version from CVMFS
[2025-10-12 12:47:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:47:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-10-12 12:47:09] apptainer works
[2025-10-12 12:47:09] Set ATHENA_PROC_NUMBER=4
[2025-10-12 12:47:09] Set ATHENA_CORE_NUMBER=4
[2025-10-12 12:47:09] Starting ATLAS job with PandaID=6837448662
[2025-10-12 12:47:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:31:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:31:43] 2025-10-12 14:09:09,698 | INFO     | monitor loop #888: job 0:6837448662 is in state 'finished'
[2025-10-12 16:31:43] 2025-10-12 14:09:09,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,756 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:31:43] 2025-10-12 14:09:10,763 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2654.7284250000002
[2025-10-12 16:31:43] 2025-10-12 14:09:10,771 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6837448662/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,772 | INFO     | extracted standard info from prmon json
[2025-10-12 16:31:43] 2025-10-12 14:09:10,772 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:31:43] 2025-10-12 14:09:10,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:31:43] 2025-10-12 14:09:10,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:31:43] 2025-10-12 14:09:10,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:31:43] 2025-10-12 14:09:10,777 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:31:43] 2025-10-12 14:09:10,778 | INFO     | sum of square deviations: 2406926989.5
[2025-10-12 16:31:43] 2025-10-12 14:09:10,779 | INFO     | sum of deviations: 23005339310.000008
[2025-10-12 16:31:43] 2025-10-12 14:09:10,780 | INFO     | mean x: 1760272071.5
[2025-10-12 16:31:43] 2025-10-12 14:09:10,780 | INFO     | mean y: 2335111.212121212
[2025-10-12 16:31:43] 2025-10-12 14:09:10,780 | INFO     | -- intersect: -16822294991.583979
[2025-10-12 16:31:43] 2025-10-12 14:09:10,780 | INFO     | intersect: -16822294991.583979
[2025-10-12 16:31:43] 2025-10-12 14:09:10,780 | INFO     | chi2: 1.3472697022395688
[2025-10-12 16:31:43] 2025-10-12 14:09:10,781 | INFO     | sum of square deviations: 2229146912.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,782 | INFO     | sum of deviations: 22233500819.999992
[2025-10-12 16:31:43] 2025-10-12 14:09:10,782 | INFO     | mean x: 1760271919.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | mean y: 2334448.4715025905
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | -- intersect: -17554609395.752552
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | intersect: -17554609395.752552
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | chi2: 1.3481432541896374
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | current chi2=1.3481432541896374 (change=-0.06483868438639687 %)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,783 | INFO     | right removable region: 192
[2025-10-12 16:31:43] 2025-10-12 14:09:10,784 | INFO     | sum of square deviations: 2229146912.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,785 | INFO     | sum of deviations: -3009796608.0000014
[2025-10-12 16:31:43] 2025-10-12 14:09:10,785 | INFO     | mean x: 1760272224.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,786 | INFO     | mean y: 2357148.481865285
[2025-10-12 16:31:43] 2025-10-12 14:09:10,786 | INFO     | -- intersect: 2379078637.958921
[2025-10-12 16:31:43] 2025-10-12 14:09:10,786 | INFO     | intersect: 2379078637.958921
[2025-10-12 16:31:43] 2025-10-12 14:09:10,786 | INFO     | chi2: 0.025627345520618943
[2025-10-12 16:31:43] 2025-10-12 14:09:10,786 | INFO     | current chi2=0.025627345520618943 (change=98.09783108177832 %)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,787 | INFO     | sum of square deviations: 2060343747.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,788 | INFO     | sum of deviations: -1096548413.4999998
[2025-10-12 16:31:43] 2025-10-12 14:09:10,788 | INFO     | mean x: 1760272376.5
[2025-10-12 16:31:43] 2025-10-12 14:09:10,788 | INFO     | mean y: 2355415.6223404254
[2025-10-12 16:31:43] 2025-10-12 14:09:10,789 | INFO     | -- intersect: 939200970.9280926
[2025-10-12 16:31:43] 2025-10-12 14:09:10,789 | INFO     | intersect: 939200970.9280926
[2025-10-12 16:31:43] 2025-10-12 14:09:10,789 | INFO     | chi2: 0.022344879899462846
[2025-10-12 16:31:43] 2025-10-12 14:09:10,789 | INFO     | current chi2=0.022344879899462846 (change=12.808449546657613 %)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,789 | INFO     | left removable region: 20
[2025-10-12 16:31:43] 2025-10-12 14:09:10,790 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,791 | INFO     | sum of deviations: 4289473579.0000005
[2025-10-12 16:31:43] 2025-10-12 14:09:10,791 | INFO     | mean x: 1760272498.5
[2025-10-12 16:31:43] 2025-10-12 14:09:10,791 | INFO     | mean y: 2349321.406976744
[2025-10-12 16:31:43] 2025-10-12 14:09:10,791 | INFO     | -- intersect: -4783233278.143035
[2025-10-12 16:31:43] 2025-10-12 14:09:10,791 | INFO     | intersect: -4783233278.143035
[2025-10-12 16:31:43] 2025-10-12 14:09:10,792 | INFO     | chi2: 0.0006281879182634082
[2025-10-12 16:31:43] 2025-10-12 14:09:10,792 | INFO     | -- intersect: -4783233278.143035
[2025-10-12 16:31:43] 2025-10-12 14:09:10,792 | INFO     | current memory leak: 2.72 B/s (using 172 data points, chi2=0.00)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | could have reported an average CPU frequency of 2565 MHz (10 samples)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | ..............................
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | . Timing measurements:
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | . get job = 0 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | . initial setup = 1 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,793 | INFO     | . payload setup = 5 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,794 | INFO     | . stage-in = 0 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,794 | INFO     | . payload execution = 12078 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,794 | INFO     | . stage-out = 1 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,794 | INFO     | . log creation = 0 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,794 | INFO     | ..............................
[2025-10-12 16:31:43] 2025-10-12 14:09:10,898 | INFO     | time since job start (12111s) is within the limit (172800.0s)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | 
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | job summary report
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | --------------------------------------------------
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | PanDA job id: 6837448662
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | task id: 46676269
[2025-10-12 16:31:43] 2025-10-12 14:09:10,906 | INFO     | errors: (none)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | pilot state: finished 
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | transexitcode: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | exeerrorcode: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | exeerrordiag: 
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | exitcode: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | exitmsg: OK
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | cpuconsumptiontime: 46364 s
[2025-10-12 16:31:43] 2025-10-12 14:09:10,907 | INFO     | nevents: 400
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | neventsw: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | pid: 1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | pgrp: 1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | corecount: 4
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | event service: False
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | sizes: {0: 2348754, 1: 2348868, 4: 2349158, 11: 2349186, 12086: 2378803, 12087: 2378802, 12088: 2388006, 12091: 2388062, 12097: 2388256}
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | --------------------------------------------------
[2025-10-12 16:31:43] 2025-10-12 14:09:10,908 | INFO     | 
[2025-10-12 16:31:43] 2025-10-12 14:09:10,909 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-10-12 16:31:43] 2025-10-12 14:09:10,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:31:43] 2025-10-12 14:09:10,930 | INFO     | job 6837448662 has completed (purged errors)
[2025-10-12 16:31:43] 2025-10-12 14:09:10,931 | INFO     | overall cleanup function is called
[2025-10-12 16:31:43] 2025-10-12 14:09:11,939 | INFO     | --- collectZombieJob: --- 10, [1512635]
[2025-10-12 16:31:43] 2025-10-12 14:09:11,939 | INFO     | zombie collector waiting for pid 1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:11,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:31:43] 2025-10-12 14:09:11,940 | INFO     | collected zombie processes
[2025-10-12 16:31:43] 2025-10-12 14:09:11,940 | INFO     | will attempt to kill all subprocesses of pid=1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:12,254 | INFO     | process IDs to be killed: [1512635] (in reverse order)
[2025-10-12 16:31:43] 2025-10-12 14:09:12,330 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:31:43] 2025-10-12 14:09:12,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:31:43] 2025-10-12 14:09:12,339 | INFO     | did not find any defunct processes belonging to 1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:12,346 | INFO     | did not find any defunct processes belonging to 1512635
[2025-10-12 16:31:43] 2025-10-12 14:09:12,346 | INFO     | ready for new job
[2025-10-12 16:31:43] 2025-10-12 14:09:12,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:31:43] 2025-10-12 14:09:12,348 | INFO     | ***************************************
[2025-10-12 16:31:43] 2025-10-12 14:09:12,348 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:31:43] 2025-10-12 14:09:12,348 | INFO     | ***************************************
[2025-10-12 16:31:43] 2025-10-12 14:09:12,348 | INFO     | 
[2025-10-12 16:31:43] 2025-10-12 14:09:12,351 | INFO     | architecture information:
[2025-10-12 16:31:43] 2025-10-12 14:09:12,351 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:31:43] 2025-10-12 14:09:12,363 | INFO     | cat /etc/os-release:
[2025-10-12 16:31:43] NAME="CentOS Linux"
[2025-10-12 16:31:43] VERSION="7 (Core)"
[2025-10-12 16:31:43] ID="centos"
[2025-10-12 16:31:43] ID_LIKE="rhel fedora"
[2025-10-12 16:31:43] VERSION_ID="7"
[2025-10-12 16:31:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:31:43] ANSI_COLOR="0;31"
[2025-10-12 16:31:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:31:43] HOME_URL="https://www.centos.org/"
[2025-10-12 16:31:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:31:43] 
[2025-10-12 16:31:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:31:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:31:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:31:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:31:43] 
[2025-10-12 16:31:43] 2025-10-12 14:09:12,364 | INFO     | ***************************************
[2025-10-12 16:31:43] 2025-10-12 14:09:12,867 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-10-12 16:31:43] 2025-10-12 14:09:12,882 | INFO     | sufficient remaining disk space (1678878179328 B)
[2025-10-12 16:31:43] 2025-10-12 14:09:12,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:31:43] 2025-10-12 14:09:12,882 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:31:43] 2025-10-12 14:09:12,883 | INFO     | update_server=False
[2025-10-12 16:31:43] 2025-10-12 14:09:12,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:31:43] 2025-10-12 14:09:12,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:31:43] 2025-10-12 14:09:12,883 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 16:31:43] 2025-10-12 14:09:12,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:43] 2025-10-12 14:09:12,884 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:31:43] 2025-10-12 14:09:12,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:31:43] 2025-10-12 14:09:12,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:31:43] 2025-10-12 14:09:13,038 | INFO     | all data control threads have been joined
[2025-10-12 16:31:43] 2025-10-12 14:09:13,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:31:43] 2025-10-12 14:09:13,207 | INFO     | aborting loop
[2025-10-12 16:31:43] 2025-10-12 14:09:13,243 | INFO     | all payload control threads have been joined
[2025-10-12 16:31:43] 2025-10-12 14:09:13,354 | INFO     | all job control threads have been joined
[2025-10-12 16:31:43] 2025-10-12 14:09:13,888 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:13,889 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:13,948 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,043 | INFO     | [data] control thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,212 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,248 | INFO     | [payload] control thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,360 | INFO     | [job] control thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,555 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,602 | INFO     | [job] validate thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,818 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,838 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:14,888 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:15,049 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:15,369 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:16,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:31:43] 2025-10-12 14:09:20,072 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:23,740 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:31:43] 2025-10-12 14:09:24,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:31:43] 2025-10-12 14:09:37,420 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:31:43] 2025-10-12 14:09:38,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23084098869056)>', '<ExcThread(monitor, started 23083857438464)>']
[2025-10-12 16:31:43] 2025-10-12 14:09:39,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:31:43] 2025-10-12 14:09:39,005 | INFO     | [monitor] control thread has ended
[2025-10-12 16:31:43] 2025-10-12 14:09:43,406 | INFO     | all workflow threads have been joined
[2025-10-12 16:31:43] 2025-10-12 14:09:43,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:31:43] 2025-10-12 14:09:43,406 | INFO     | traces error code: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:43,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:31:43] 2025-10-12 14:09:43,528 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:31:43] 2025-10-12 14:09:43,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:31:43] 2025-10-12 14:09:43,533 [wrapper] pilotpid: 1491400
[2025-10-12 16:31:43] 2025-10-12 14:09:43,535 [wrapper] Pilot exit status: 0
[2025-10-12 16:31:43] 2025-10-12 14:09:43,544 [wrapper] pandaids: 6837448662
[2025-10-12 16:31:43] 2025-10-12 14:09:43,596 [wrapper] cleanup supervisor_pilot 1646105 1491401
[2025-10-12 16:31:43] 2025-10-12 14:09:43,598 [wrapper] Test setup, not cleaning
[2025-10-12 16:31:43] 2025-10-12 14:09:43,600 [wrapper] apfmon messages muted
[2025-10-12 16:31:43] 2025-10-12 14:09:43,603 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:31:43] 2025-10-12 14:09:43,605 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:31:43]  *** Error codes and diagnostics ***
[2025-10-12 16:31:43]     "exeErrorCode": 0,
[2025-10-12 16:31:43]     "exeErrorDiag": "",
[2025-10-12 16:31:43]     "pilotErrorCode": 0,
[2025-10-12 16:31:43]     "pilotErrorDiag": "",
[2025-10-12 16:31:43]  *** Listing of results directory ***
[2025-10-12 16:31:43] total 411056
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc    557409 Oct 10 06:44 pilot3.tar.gz
[2025-10-12 16:31:43] -rwx------ 1 boinc boinc     36292 Oct 10 06:47 runpilot2-wrapper.sh
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc      5112 Oct 10 06:47 queuedata.json
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:31:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:47 run_atlas
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:47 job.xml
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc      6421 Oct 12 12:47 init_data.xml
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc 222503340 Oct 12 12:47 EVNT.46676267._001328.pool.root.1
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:47 start_atlas.sh
[2025-10-12 16:31:43] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:47 shared
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc    569683 Oct 12 12:47 input.tar.gz
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:47 boinc_lockfile
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc      2550 Oct 12 12:47 pandaJob.out
[2025-10-12 16:31:43] -rw------- 1 boinc boinc    975520 Oct 12 12:47 agis_schedconf.cvmfs.json
[2025-10-12 16:31:43] drwx------ 5 boinc boinc      4096 Oct 12 12:47 pilot3
[2025-10-12 16:31:43] -rw------- 1 boinc boinc 190301350 Oct 12 16:08 HITS.46676269._032612.pool.root.1
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc       527 Oct 12 16:08 boinc_task_state.xml
[2025-10-12 16:31:43] -rw------- 1 boinc boinc        95 Oct 12 16:08 pilot_heartbeat.json
[2025-10-12 16:31:43] -rw------- 1 boinc boinc      1037 Oct 12 16:08 memory_monitor_summary.json
[2025-10-12 16:31:43] -rw------- 1 boinc boinc   1560580 Oct 12 16:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:31:43] -rw------- 1 boinc boinc    374936 Oct 12 16:09 log.46676269._032612.job.log.tgz.1
[2025-10-12 16:31:43] -rw------- 1 boinc boinc      7832 Oct 12 16:09 heartbeat.json
[2025-10-12 16:31:43] -rw------- 1 boinc boinc      4635 Oct 12 16:09 pilotlog.txt
[2025-10-12 16:31:43] -rw------- 1 boinc boinc   1728903 Oct 12 16:09 log.46676269._032612.job.log.1
[2025-10-12 16:31:43] -rw------- 1 boinc boinc       357 Oct 12 16:09 output.list
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:09 runtime_log
[2025-10-12 16:31:43] -rw------- 1 boinc boinc   2119680 Oct 12 16:09 result.tar.gz
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc      9070 Oct 12 16:09 runtime_log.err
[2025-10-12 16:31:43] -rw------- 1 boinc boinc       665 Oct 12 16:09 JWXMDmpDKR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtNPMDmJqQmvm.diag
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc        25 Oct 12 16:31 wrapper_checkpoint.txt
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:31 boinc_mmap_file
[2025-10-12 16:31:43] -rw-r--r-- 1 boinc boinc     20887 Oct 12 16:31 stderr.txt
[2025-10-12 16:31:43] HITS file was successfully produced:
[2025-10-12 16:31:43] -rw------- 1 boinc boinc 190301350 Oct 12 16:08 shared/HITS.pool.root.1
[2025-10-12 16:31:43]  *** Contents of shared directory: ***
[2025-10-12 16:31:43] total 405792
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc 222503340 Oct 12 12:47 ATLAS.root_0
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:47 start_atlas.sh
[2025-10-12 16:31:43] -rw-r--r-- 2 boinc boinc    569683 Oct 12 12:47 input.tar.gz
[2025-10-12 16:31:43] -rw------- 1 boinc boinc 190301350 Oct 12 16:08 HITS.pool.root.1
[2025-10-12 16:31:43] -rw------- 1 boinc boinc   2119680 Oct 12 16:09 result.tar.gz
16:31:45 (1481580): run_atlas exited; CPU time 46827.067918
16:31:45 (1481580): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN