Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:30:31 (3684403): wrapper (7.7.26015): starting
19:30:31 (3684403): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 19:30:31] Arguments: --nthreads 9
[2025-10-11 19:30:31] Threads: 9
[2025-10-11 19:30:31] Checking for CVMFS
[2025-10-11 19:30:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:30:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:30:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:30:33] 2.13.2.0 5359 4899 109108 151600 2 65 36501931 40960000 12927 16776704 0 7812152 99.862 2677211 36337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 19:30:33] CVMFS is ok
[2025-10-11 19:30:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:30:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:30:33] Further information can be found at the LHC@home message board.
[2025-10-11 19:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:30:33] Checking for apptainer binary...
[2025-10-11 19:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:30:33] Running /usr/bin/apptainer --version
[2025-10-11 19:30:33] apptainer version 1.4.3-1.el9
[2025-10-11 19:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:30:34] c-210-35-2.aglt2.org
[2025-10-11 19:30:34] apptainer works
[2025-10-11 19:30:34] Set ATHENA_PROC_NUMBER=9
[2025-10-11 19:30:34] Set ATHENA_CORE_NUMBER=9
[2025-10-11 19:30:34] Starting ATLAS job with PandaID=6838633994
[2025-10-11 19:30:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:18:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:18:09] 2025-10-12 02:17:33,391 | INFO     | extracted standard info from prmon json
[2025-10-11 22:18:09] 2025-10-12 02:17:33,392 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:18:09] 2025-10-12 02:17:33,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:18:09] 2025-10-12 02:17:33,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:18:09] 2025-10-12 02:17:33,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:18:09] 2025-10-12 02:17:33,395 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:18:09] 2025-10-12 02:17:33,396 | INFO     | sum of square deviations: 1294147391.2795026
[2025-10-11 22:18:09] 2025-10-12 02:17:33,397 | INFO     | sum of deviations: -21958917925.136642
[2025-10-11 22:18:09] 2025-10-12 02:17:33,398 | INFO     | mean x: 1760230483.5776398
[2025-10-11 22:18:09] 2025-10-12 02:17:33,398 | INFO     | mean y: 2637246.850931677
[2025-10-11 22:18:09] 2025-10-12 02:17:33,398 | INFO     | -- intersect: 29869990052.770214
[2025-10-11 22:18:09] 2025-10-12 02:17:33,398 | INFO     | intersect: 29869990052.770214
[2025-10-11 22:18:09] 2025-10-12 02:17:33,399 | INFO     | chi2: 1.9279815371817781
[2025-10-11 22:18:09] 2025-10-12 02:17:33,399 | INFO     | sum of square deviations: 1177288409.0769258
[2025-10-11 22:18:09] 2025-10-12 02:17:33,400 | INFO     | sum of deviations: -20881024392.384617
[2025-10-11 22:18:09] 2025-10-12 02:17:33,400 | INFO     | mean x: 1760230331.0769231
[2025-10-11 22:18:09] 2025-10-12 02:17:33,400 | INFO     | mean y: 2638662.3653846155
[2025-10-11 22:18:09] 2025-10-12 02:17:33,401 | INFO     | -- intersect: 31223036481.665436
[2025-10-11 22:18:09] 2025-10-12 02:17:33,401 | INFO     | intersect: 31223036481.665436
[2025-10-11 22:18:09] 2025-10-12 02:17:33,401 | INFO     | chi2: 1.9233104958955585
[2025-10-11 22:18:09] 2025-10-12 02:17:33,401 | INFO     | current chi2=1.9233104958955585 (change=0.2422762457075978 %)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,401 | INFO     | right removable region: 155
[2025-10-11 22:18:09] 2025-10-12 02:17:33,402 | INFO     | sum of square deviations: 1177261019.5576892
[2025-10-11 22:18:09] 2025-10-12 02:17:33,403 | INFO     | sum of deviations: -48858417922.576965
[2025-10-11 22:18:09] 2025-10-12 02:17:33,403 | INFO     | mean x: 1760230636.0961537
[2025-10-11 22:18:09] 2025-10-12 02:17:33,403 | INFO     | mean y: 2671875.0384615385
[2025-10-11 22:18:09] 2025-10-12 02:17:33,403 | INFO     | -- intersect: 73055361660.7084
[2025-10-11 22:18:09] 2025-10-12 02:17:33,403 | INFO     | intersect: 73055361660.7084
[2025-10-11 22:18:09] 2025-10-12 02:17:33,404 | INFO     | chi2: 0.2946773518870939
[2025-10-11 22:18:09] 2025-10-12 02:17:33,404 | INFO     | current chi2=0.2946773518870939 (change=84.71575862091306 %)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,404 | INFO     | sum of square deviations: 1067639869.9470165
[2025-10-11 22:18:09] 2025-10-12 02:17:33,405 | INFO     | sum of deviations: -46562059242.21854
[2025-10-11 22:18:09] 2025-10-12 02:17:33,405 | INFO     | mean x: 1760230788.6092715
[2025-10-11 22:18:09] 2025-10-12 02:17:33,405 | INFO     | mean y: 2668592.013245033
[2025-10-11 22:18:09] 2025-10-12 02:17:33,405 | INFO     | -- intersect: 76770099788.8918
[2025-10-11 22:18:09] 2025-10-12 02:17:33,405 | INFO     | intersect: 76770099788.8918
[2025-10-11 22:18:09] 2025-10-12 02:17:33,406 | INFO     | chi2: 0.27252916693360885
[2025-10-11 22:18:09] 2025-10-12 02:17:33,406 | INFO     | current chi2=0.27252916693360885 (change=7.516079811240853 %)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,406 | INFO     | left removable region: 20
[2025-10-11 22:18:09] 2025-10-12 02:17:33,406 | INFO     | sum of square deviations: 762951085.9703674
[2025-10-11 22:18:09] 2025-10-12 02:17:33,407 | INFO     | sum of deviations: -31757355044.6963
[2025-10-11 22:18:09] 2025-10-12 02:17:33,407 | INFO     | mean x: 1760230910.6148148
[2025-10-11 22:18:09] 2025-10-12 02:17:33,407 | INFO     | mean y: 2650491.948148148
[2025-10-11 22:18:09] 2025-10-12 02:17:33,408 | INFO     | -- intersect: 73271145703.46802
[2025-10-11 22:18:09] 2025-10-12 02:17:33,408 | INFO     | intersect: 73271145703.46802
[2025-10-11 22:18:09] 2025-10-12 02:17:33,408 | INFO     | chi2: 0.2439300809600908
[2025-10-11 22:18:09] 2025-10-12 02:17:33,408 | INFO     | -- intersect: 73271145703.46802
[2025-10-11 22:18:09] 2025-10-12 02:17:33,408 | INFO     | current memory leak: -41.62 B/s (using 135 data points, chi2=0.24)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | could have reported an average CPU frequency of 2587 MHz (9 samples)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | ..............................
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | . Timing measurements:
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | . get job = 0 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | . initial setup = 4 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,409 | INFO     | . payload setup = 30 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,410 | INFO     | . stage-in = 0 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,410 | INFO     | . payload execution = 9836 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,410 | INFO     | . stage-out = 2 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,410 | INFO     | . log creation = 0 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,410 | INFO     | ..............................
[2025-10-11 22:18:09] 2025-10-12 02:17:33,628 | INFO     | 
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | job summary report
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | --------------------------------------------------
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | PanDA job id: 6838633994
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | task id: 46676269
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | errors: (none)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | pilot state: finished 
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | transexitcode: 0
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | exeerrorcode: 0
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | exeerrordiag: 
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | exitcode: 0
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | exitmsg: OK
[2025-10-11 22:18:09] 2025-10-12 02:17:33,629 | INFO     | cpuconsumptiontime: 40058 s
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | nevents: 400
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | neventsw: 0
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | pid: 3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | pgrp: 3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | corecount: 9
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | event service: False
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 27: 2349259, 34: 2349415, 9871: 2378063, 9874: 2387061, 9875: 2387117, 9907: 2387375}
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | --------------------------------------------------
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | 
[2025-10-11 22:18:09] 2025-10-12 02:17:33,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 22:18:09] 2025-10-12 02:17:33,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:18:09] 2025-10-12 02:17:33,689 | INFO     | job 6838633994 has completed (purged errors)
[2025-10-11 22:18:09] 2025-10-12 02:17:33,689 | INFO     | overall cleanup function is called
[2025-10-11 22:18:09] 2025-10-12 02:17:34,381 | INFO     | PID=3688218 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:18:09] 2025-10-12 02:17:34,381 | INFO     | .. there are 10 such processes running
[2025-10-11 22:18:09] 2025-10-12 02:17:34,704 | INFO     | --- collectZombieJob: --- 10, [3697921]
[2025-10-11 22:18:09] 2025-10-12 02:17:34,704 | INFO     | zombie collector waiting for pid 3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:34,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:18:09] 2025-10-12 02:17:34,705 | INFO     | collected zombie processes
[2025-10-11 22:18:09] 2025-10-12 02:17:34,705 | INFO     | will attempt to kill all subprocesses of pid=3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:35,363 | INFO     | process IDs to be killed: [3697921] (in reverse order)
[2025-10-11 22:18:09] 2025-10-12 02:17:35,493 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:18:09] 2025-10-12 02:17:35,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:18:09] 2025-10-12 02:17:35,508 | INFO     | did not find any defunct processes belonging to 3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:35,527 | INFO     | did not find any defunct processes belonging to 3697921
[2025-10-11 22:18:09] 2025-10-12 02:17:35,527 | INFO     | ready for new job
[2025-10-11 22:18:09] 2025-10-12 02:17:35,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:18:09] 2025-10-12 02:17:35,533 | INFO     | ***************************************
[2025-10-11 22:18:09] 2025-10-12 02:17:35,533 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:18:09] 2025-10-12 02:17:35,533 | INFO     | ***************************************
[2025-10-11 22:18:09] 2025-10-12 02:17:35,533 | INFO     | 
[2025-10-11 22:18:09] 2025-10-12 02:17:35,536 | INFO     | architecture information:
[2025-10-11 22:18:09] 2025-10-12 02:17:35,537 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:18:09] 2025-10-12 02:17:35,735 | INFO     | cat /etc/os-release:
[2025-10-11 22:18:09] NAME="CentOS Linux"
[2025-10-11 22:18:09] VERSION="7 (Core)"
[2025-10-11 22:18:09] ID="centos"
[2025-10-11 22:18:09] ID_LIKE="rhel fedora"
[2025-10-11 22:18:09] VERSION_ID="7"
[2025-10-11 22:18:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:18:09] ANSI_COLOR="0;31"
[2025-10-11 22:18:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:18:09] HOME_URL="https://www.centos.org/"
[2025-10-11 22:18:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:18:09] 
[2025-10-11 22:18:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:18:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:18:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:18:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:18:09] 
[2025-10-11 22:18:09] 2025-10-12 02:17:35,735 | INFO     | ***************************************
[2025-10-11 22:18:09] 2025-10-12 02:17:36,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 22:18:09] 2025-10-12 02:17:36,310 | INFO     | sufficient remaining disk space (74188849152 B)
[2025-10-11 22:18:09] 2025-10-12 02:17:36,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:18:09] 2025-10-12 02:17:36,311 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:18:09] 2025-10-12 02:17:36,312 | INFO     | update_server=False
[2025-10-11 22:18:09] 2025-10-12 02:17:36,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:18:09] 2025-10-12 02:17:36,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:18:09] 2025-10-12 02:17:36,446 | INFO     | all data control threads have been joined
[2025-10-11 22:18:09] 2025-10-12 02:17:36,502 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 22:18:09] 2025-10-12 02:17:36,503 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 22:18:09] 2025-10-12 02:17:36,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:18:09] 2025-10-12 02:17:36,503 | INFO     | will abort loop
[2025-10-11 22:18:09] 2025-10-12 02:17:36,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:18:09] 2025-10-12 02:17:37,064 | INFO     | all job control threads have been joined
[2025-10-11 22:18:09] 2025-10-12 02:17:37,317 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:37,467 | INFO     | [data] control thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:37,492 | INFO     | all payload control threads have been joined
[2025-10-11 22:18:09] 2025-10-12 02:17:37,509 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:37,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,072 | INFO     | [job] control thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,168 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,178 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,382 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,390 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,498 | INFO     | [payload] control thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:18:09] 2025-10-12 02:17:38,716 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,769 | INFO     | [job] validate thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:38,834 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:39,652 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:40,328 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:44,768 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:18:09] 2025-10-12 02:17:47,153 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:18:09] 2025-10-12 02:17:48,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:18:09] 2025-10-12 02:17:50,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173435496256)>', '<ExcThread(monitor, started 140172935018240)>']
[2025-10-11 22:18:09] 2025-10-12 02:17:55,216 | INFO     | all workflow threads have been joined
[2025-10-11 22:18:09] 2025-10-12 02:17:55,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:18:09] 2025-10-12 02:17:55,217 | INFO     | traces error code: 0
[2025-10-11 22:18:09] 2025-10-12 02:17:55,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:18:09] 2025-10-12 02:18:07,930 | INFO     | PID=3688218 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:18:09] 2025-10-12 02:18:07,930 | INFO     | .. there are 10 such processes running
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 22:18:09] 2025-10-12 02:18:07,931 | INFO     | [monitor] control thread has ended
[2025-10-11 22:18:09] 2025-10-12 02:18:08,147 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:18:09] 2025-10-12 02:18:08,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:18:09] 2025-10-12 02:18:08,183 [wrapper] pilotpid: 3688218
[2025-10-11 22:18:09] 2025-10-12 02:18:08,205 [wrapper] Pilot exit status: 0
[2025-10-11 22:18:09] 2025-10-12 02:18:08,304 [wrapper] pandaids: 6838633994
[2025-10-11 22:18:09] 2025-10-12 02:18:08,424 [wrapper] cleanup supervisor_pilot 3948569 3688219
[2025-10-11 22:18:09] 2025-10-12 02:18:08,427 [wrapper] Test setup, not cleaning
[2025-10-11 22:18:09] 2025-10-12 02:18:08,447 [wrapper] apfmon messages muted
[2025-10-11 22:18:09] 2025-10-12 02:18:08,467 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:18:09] 2025-10-12 02:18:08,485 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:18:09]  *** Error codes and diagnostics ***
[2025-10-11 22:18:09]     "exeErrorCode": 0,
[2025-10-11 22:18:09]     "exeErrorDiag": "",
[2025-10-11 22:18:09]     "pilotErrorCode": 0,
[2025-10-11 22:18:09]     "pilotErrorDiag": "",
[2025-10-11 22:18:09]  *** Listing of results directory ***
[2025-10-11 22:18:09] total 407516
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:07 pilot3.tar.gz
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:13 queuedata.json
[2025-10-11 22:18:09] -rwx------. 1 boincer umatlas     36292 Oct 11 13:13 runpilot2-wrapper.sh
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:18:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:30 run_atlas
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:30 job.xml
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas 219246705 Oct 11 19:30 EVNT.46676267._002470.pool.root.1
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 19:30 input.tar.gz
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:30 start_atlas.sh
[2025-10-11 22:18:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:30 shared
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:30 boinc_lockfile
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:30 pandaJob.out
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas    975528 Oct 11 19:31 agis_schedconf.cvmfs.json
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:31 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:18:09] drwx------. 5 boincer umatlas      4096 Oct 11 19:31 pilot3
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas      6838 Oct 11 22:11 init_data.xml
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas 190573321 Oct 11 22:16 HITS.46676269._061514.pool.root.1
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas       530 Oct 11 22:16 boinc_task_state.xml
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas      1043 Oct 11 22:16 memory_monitor_summary.json
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas    423438 Oct 11 22:17 log.46676269._061514.job.log.tgz.1
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas        95 Oct 11 22:17 pilot_heartbeat.json
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas      7831 Oct 11 22:17 heartbeat.json
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas        27 Oct 11 22:17 wrapper_checkpoint.txt
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:17 boinc_mmap_file
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas       893 Oct 11 22:18 pilotlog.txt
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas   1364242 Oct 11 22:18 log.46676269._061514.job.log.1
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas       357 Oct 11 22:18 output.list
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:18 runtime_log
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas   1802240 Oct 11 22:18 result.tar.gz
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 22:18 runtime_log.err
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas       657 Oct 11 22:18 OxsNDm1KsR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyHSMDmRkiJQm.diag
[2025-10-11 22:18:09] -rw-r--r--. 1 boincer umatlas     21201 Oct 11 22:18 stderr.txt
[2025-10-11 22:18:09] HITS file was successfully produced:
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas 190573321 Oct 11 22:16 shared/HITS.pool.root.1
[2025-10-11 22:18:09]  *** Contents of shared directory: ***
[2025-10-11 22:18:09] total 402564
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas 219246705 Oct 11 19:30 ATLAS.root_0
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 19:30 input.tar.gz
[2025-10-11 22:18:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:30 start_atlas.sh
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas 190573321 Oct 11 22:16 HITS.pool.root.1
[2025-10-11 22:18:09] -rw-------. 1 boincer umatlas   1802240 Oct 11 22:18 result.tar.gz
22:18:10 (3684403): run_atlas exited; CPU time 40282.699025
22:18:10 (3684403): called boinc_finish(0)

</stderr_txt>
]]>

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