Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:19:43 (3604505): wrapper (7.7.26015): starting
14:19:43 (3604505): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 14:19:43] Arguments: --nthreads 4
[2025-10-12 14:19:43] Threads: 4
[2025-10-12 14:19:43] Checking for CVMFS
[2025-10-12 14:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:19:43] 2.13.2.0 1261730 1915 51828 151604 3 188 3689751 6144000 2733 130560 0 5183421 99.997 60251 95 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 14:19:43] CVMFS is ok
[2025-10-12 14:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:19:43] Checking for apptainer binary...
[2025-10-12 14:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:19:43] Running /usr/bin/apptainer --version
[2025-10-12 14:19:43] apptainer version 1.4.0
[2025-10-12 14:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:19:43] Zen
[2025-10-12 14:19:43] apptainer works
[2025-10-12 14:19:43] Set ATHENA_PROC_NUMBER=4
[2025-10-12 14:19:43] Set ATHENA_CORE_NUMBER=4
[2025-10-12 14:19:43] Starting ATLAS job with PandaID=6838633937
[2025-10-12 14:19:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:58:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:58:08]  mtime=0
[2025-10-12 15:58:08]  protocol_id=None
[2025-10-12 15:58:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 15:58:08]  replicas=None
[2025-10-12 15:58:08]  scope=mc23_13p6TeV
[2025-10-12 15:58:08]  status=None
[2025-10-12 15:58:08]  status_code=0
[2025-10-12 15:58:08]  storage_token=
[2025-10-12 15:58:08]  surl=/home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6838633937/log.46676269._061457.job.log.tgz.1
[2025-10-12 15:58:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/65/log.46676269._061457.job.log.tgz.1
[2025-10-12 15:58:08]  workdir=None
[2025-10-12 15:58:08] ]
[2025-10-12 15:58:08] 2025-10-12 04:57:15,949 | INFO     | transferring file log.46676269._061457.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6838633937/log.46676269._061457.job.log.tgz.1 to /home/mich
[2025-10-12 15:58:08] 2025-10-12 04:57:15,949 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6838633937/log.46676269._061457.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/4/lo
[2025-10-12 15:58:08] 2025-10-12 04:57:15,963 | INFO     | adding to output.list: log.46676269._061457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/65/log.46676269._061457.job.log.tg
[2025-10-12 15:58:08] 2025-10-12 04:57:15,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:58:08] 2025-10-12 04:57:15,963 | INFO     | summary of transferred files:
[2025-10-12 15:58:08] 2025-10-12 04:57:15,963 | INFO     |  -- lfn=log.46676269._061457.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:58:08] 2025-10-12 04:57:15,964 | INFO     | stage-out finished correctly
[2025-10-12 15:58:08] 2025-10-12 04:57:16,200 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:58:08] 2025-10-12 04:57:16,263 | INFO     | job 6838633937 has state=finished
[2025-10-12 15:58:08] 2025-10-12 04:57:16,264 | INFO     | preparing for final server update for job 6838633937 in state='finished'
[2025-10-12 15:58:08] 2025-10-12 04:57:16,264 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:58:08] 2025-10-12 04:57:16,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:58:08] 2025-10-12 04:57:16,264 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:58:08] 2025-10-12 04:57:16,264 | INFO     | job 6838633937 has finished - writing final server update
[2025-10-12 15:58:08] 2025-10-12 04:57:16,265 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:58:08] 2025-10-12 04:57:16,265 | INFO     | executing command: lscpu
[2025-10-12 15:58:08] 2025-10-12 04:57:16,292 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:58:08] 2025-10-12 04:57:16,416 | INFO     | time since job start (5843s) is within the limit (172800.0s)
[2025-10-12 15:58:08] 2025-10-12 04:57:17,572 | INFO     | PID=3608313 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:58:08] 2025-10-12 04:57:17,572 | INFO     | .. there are 4 such processes running
[2025-10-12 15:58:08] 2025-10-12 04:57:17,714 | INFO     | monitor loop #442: job 0:6838633937 is in state 'finished'
[2025-10-12 15:58:08] 2025-10-12 04:57:17,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:58:08] 2025-10-12 04:57:18,572 | INFO     | time since job start (5845s) is within the limit (172800.0s)
[2025-10-12 15:58:08] 2025-10-12 04:57:18,975 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:58:08] 2025-10-12 04:57:18,978 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4227.138375
[2025-10-12 15:58:08] 2025-10-12 04:57:18,981 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6838633937/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:58:08] 2025-10-12 04:57:18,982 | INFO     | extracted standard info from prmon json
[2025-10-12 15:58:08] 2025-10-12 04:57:18,982 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:58:08] 2025-10-12 04:57:18,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:58:08] 2025-10-12 04:57:18,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:58:08] 2025-10-12 04:57:18,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:58:08] 2025-10-12 04:57:18,983 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | sum of deviations: -2431021531.9999995
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | mean x: 1760242202.0
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | mean y: 2371423.2808988765
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | -- intersect: 19580339783.649742
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | intersect: 19580339783.649742
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | chi2: 0.00826755841784344
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | -- intersect: 19580339783.649742
[2025-10-12 15:58:08] 2025-10-12 04:57:18,984 | INFO     | current memory leak: -11.12 B/s (using 89 data points, chi2=0.01)
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | could have reported an average CPU frequency of 4264 MHz (7 samples)
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | ..............................
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . Timing measurements:
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . get job = 0 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . initial setup = 4 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . payload setup = 3 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . stage-in = 0 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . payload execution = 5821 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . stage-out = 0 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | . log creation = 0 s
[2025-10-12 15:58:08] 2025-10-12 04:57:18,985 | INFO     | ..............................
[2025-10-12 15:58:08] 2025-10-12 04:57:19,380 | INFO     | 
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | job summary report
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | --------------------------------------------------
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | PanDA job id: 6838633937
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | task id: 46676269
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | errors: (none)
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | pilot state: finished 
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | transexitcode: 0
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | exeerrorcode: 0
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | exeerrordiag: 
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | exitcode: 0
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | exitmsg: OK
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | cpuconsumptiontime: 22181 s
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | nevents: 400
[2025-10-12 15:58:08] 2025-10-12 04:57:19,381 | INFO     | neventsw: 0
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | pid: 3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | pgrp: 3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | corecount: 4
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | event service: False
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | sizes: {0: 2348641, 1: 2348896, 3: 2349158, 11: 2349186, 5827: 2375995, 5828: 2385198, 5829: 2385198, 5831: 2385392}
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | --------------------------------------------------
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | 
[2025-10-12 15:58:08] 2025-10-12 04:57:19,382 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/4
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | job 6838633937 has completed (purged errors)
[2025-10-12 15:58:08] 2025-10-12 04:57:19,401 | INFO     | overall cleanup function is called
[2025-10-12 15:58:08] 2025-10-12 04:57:20,409 | INFO     | --- collectZombieJob: --- 10, [3614890]
[2025-10-12 15:58:08] 2025-10-12 04:57:20,409 | INFO     | zombie collector waiting for pid 3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:20,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:58:08] 2025-10-12 04:57:20,409 | INFO     | collected zombie processes
[2025-10-12 15:58:08] 2025-10-12 04:57:20,409 | INFO     | will attempt to kill all subprocesses of pid=3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:20,554 | INFO     | process IDs to be killed: [3614890] (in reverse order)
[2025-10-12 15:58:08] 2025-10-12 04:57:20,610 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:58:08] 2025-10-12 04:57:20,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:58:08] 2025-10-12 04:57:20,615 | INFO     | did not find any defunct processes belonging to 3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:20,618 | INFO     | did not find any defunct processes belonging to 3614890
[2025-10-12 15:58:08] 2025-10-12 04:57:20,619 | INFO     | ready for new job
[2025-10-12 15:58:08] 2025-10-12 04:57:20,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:58:08] 2025-10-12 04:57:20,620 | INFO     | ***************************************
[2025-10-12 15:58:08] 2025-10-12 04:57:20,620 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:58:08] 2025-10-12 04:57:20,620 | INFO     | ***************************************
[2025-10-12 15:58:08] 2025-10-12 04:57:20,620 | INFO     | 
[2025-10-12 15:58:08] 2025-10-12 04:57:20,621 | INFO     | architecture information:
[2025-10-12 15:58:08] 2025-10-12 04:57:20,621 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:58:08] 2025-10-12 04:57:20,637 | INFO     | cat /etc/os-release:
[2025-10-12 15:58:08] NAME="CentOS Linux"
[2025-10-12 15:58:08] VERSION="7 (Core)"
[2025-10-12 15:58:08] ID="centos"
[2025-10-12 15:58:08] ID_LIKE="rhel fedora"
[2025-10-12 15:58:08] VERSION_ID="7"
[2025-10-12 15:58:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:58:08] ANSI_COLOR="0;31"
[2025-10-12 15:58:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:58:08] HOME_URL="https://www.centos.org/"
[2025-10-12 15:58:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:58:08] 
[2025-10-12 15:58:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:58:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:58:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:58:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:58:08] 
[2025-10-12 15:58:08] 2025-10-12 04:57:20,637 | INFO     | ***************************************
[2025-10-12 15:58:08] 2025-10-12 04:57:21,140 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/4
[2025-10-12 15:58:08] 2025-10-12 04:57:21,159 | INFO     | sufficient remaining disk space (207201763328 B)
[2025-10-12 15:58:08] 2025-10-12 04:57:21,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:58:08] 2025-10-12 04:57:21,159 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:58:08] 2025-10-12 04:57:21,159 | INFO     | update_server=False
[2025-10-12 15:58:08] 2025-10-12 04:57:21,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:58:08] 2025-10-12 04:57:21,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:58:08] 2025-10-12 04:57:21,222 | INFO     | aborting loop
[2025-10-12 15:58:08] 2025-10-12 04:57:21,433 | INFO     | all job control threads have been joined
[2025-10-12 15:58:08] 2025-10-12 04:57:21,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:58:08] 2025-10-12 04:57:21,910 | INFO     | all payload control threads have been joined
[2025-10-12 15:58:08] 2025-10-12 04:57:22,165 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:22,185 | INFO     | all data control threads have been joined
[2025-10-12 15:58:08] 2025-10-12 04:57:22,227 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:22,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:58:08] 2025-10-12 04:57:22,438 | INFO     | [job] control thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:22,782 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:22,916 | INFO     | [payload] control thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,141 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,190 | INFO     | [data] control thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,393 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,485 | INFO     | [job] validate thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,545 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,607 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,622 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:23,727 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:24,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:58:08] 2025-10-12 04:57:25,061 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:26,273 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:31,466 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:58:08] 2025-10-12 04:57:32,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:58:08] 2025-10-12 04:57:51,783 | INFO     | PID=3608313 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:58:08] 2025-10-12 04:57:51,783 | INFO     | .. there are 4 such processes running
[2025-10-12 15:58:08] 2025-10-12 04:57:51,784 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:58:08] 2025-10-12 04:57:51,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:58:08] 2025-10-12 04:57:51,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:58:08] 2025-10-12 04:58:02,998 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:58:08] 2025-10-12 04:58:03,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125332919600960)>', '<ExcThread(monitor, started 125332422117120)>']
[2025-10-12 15:58:08] 2025-10-12 04:58:03,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:58:08] 2025-10-12 04:58:03,838 | INFO     | [monitor] control thread has ended
[2025-10-12 15:58:08] 2025-10-12 04:58:08,598 | INFO     | all workflow threads have been joined
[2025-10-12 15:58:08] 2025-10-12 04:58:08,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:58:08] 2025-10-12 04:58:08,599 | INFO     | traces error code: 0
[2025-10-12 15:58:08] 2025-10-12 04:58:08,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:58:08] 2025-10-12 04:58:08,662 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:58:08] 2025-10-12 04:58:08,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:58:08] 2025-10-12 04:58:08,666 [wrapper] pilotpid: 3608313
[2025-10-12 15:58:08] 2025-10-12 04:58:08,668 [wrapper] Pilot exit status: 0
[2025-10-12 15:58:08] 2025-10-12 04:58:08,675 [wrapper] pandaids: 6838633937
[2025-10-12 15:58:08] 2025-10-12 04:58:08,713 [wrapper] cleanup supervisor_pilot 3714284 3608314
[2025-10-12 15:58:08] 2025-10-12 04:58:08,716 [wrapper] Test setup, not cleaning
[2025-10-12 15:58:08] 2025-10-12 04:58:08,718 [wrapper] apfmon messages muted
[2025-10-12 15:58:08] 2025-10-12 04:58:08,721 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:58:08] 2025-10-12 04:58:08,722 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:58:08]  *** Error codes and diagnostics ***
[2025-10-12 15:58:08]     "exeErrorCode": 0,
[2025-10-12 15:58:08]     "exeErrorDiag": "",
[2025-10-12 15:58:08]     "pilotErrorCode": 0,
[2025-10-12 15:58:08]     "pilotErrorDiag": "",
[2025-10-12 15:58:08]  *** Listing of results directory ***
[2025-10-12 15:58:08] total 410668
[2025-10-12 15:58:08] -rw-r--r-- 1 michael michael    557409 Oct 12 04:07 pilot3.tar.gz
[2025-10-12 15:58:08] -rwx------ 1 michael michael     36292 Oct 12 04:08 runpilot2-wrapper.sh
[2025-10-12 15:58:08] -rw-r--r-- 1 michael michael      5112 Oct 12 04:08 queuedata.json
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael       100 Oct 12 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:58:08] -rwxr-xr-x 1 michael michael      7986 Oct 12 14:19 run_atlas
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael       105 Oct 12 14:19 job.xml
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael 221128757 Oct 12 14:19 EVNT.46676267._002468.pool.root.1
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael      9816 Oct 12 14:19 init_data.xml
[2025-10-12 15:58:08] drwxrwx--x 2 michael michael      4096 Oct 12 14:19 shared
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael    569677 Oct 12 14:19 input.tar.gz
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael     15120 Oct 12 14:19 start_atlas.sh
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael         0 Oct 12 14:19 boinc_lockfile
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael      2550 Oct 12 14:19 pandaJob.out
[2025-10-12 15:58:08] -rw------- 1 michael michael    975496 Oct 12 14:19 agis_schedconf.cvmfs.json
[2025-10-12 15:58:08] -rw------- 1 michael michael   1560580 Oct 12 14:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:58:08] drwx------ 5 michael michael      4096 Oct 12 14:19 pilot3
[2025-10-12 15:58:08] -rw------- 1 michael michael 193170032 Oct 12 15:56 HITS.46676269._061457.pool.root.1
[2025-10-12 15:58:08] -rw------- 1 michael michael      1024 Oct 12 15:57 memory_monitor_summary.json
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael       529 Oct 12 15:57 boinc_task_state.xml
[2025-10-12 15:58:08] -rw------- 1 michael michael    283156 Oct 12 15:57 log.46676269._061457.job.log.tgz.1
[2025-10-12 15:58:08] -rw------- 1 michael michael      7732 Oct 12 15:57 heartbeat.json
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael      8192 Oct 12 15:57 boinc_mmap_file
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael        27 Oct 12 15:57 wrapper_checkpoint.txt
[2025-10-12 15:58:08] -rw------- 1 michael michael        95 Oct 12 15:57 pilot_heartbeat.json
[2025-10-12 15:58:08] -rw------- 1 michael michael      4907 Oct 12 15:58 pilotlog.txt
[2025-10-12 15:58:08] -rw------- 1 michael michael    871070 Oct 12 15:58 log.46676269._061457.job.log.1
[2025-10-12 15:58:08] -rw------- 1 michael michael       357 Oct 12 15:58 output.list
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael       620 Oct 12 15:58 runtime_log
[2025-10-12 15:58:08] -rw------- 1 michael michael   1177600 Oct 12 15:58 result.tar.gz
[2025-10-12 15:58:08] -rw------- 1 michael michael       641 Oct 12 15:58 ZvsNDm5FsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv1gNDmO5ISqn.diag
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael      8797 Oct 12 15:58 runtime_log.err
[2025-10-12 15:58:08] -rw-rw-r-- 1 michael michael     21473 Oct 12 15:58 stderr.txt
[2025-10-12 15:58:08] HITS file was successfully produced:
[2025-10-12 15:58:08] -rw------- 1 michael michael 193170032 Oct 12 15:56 shared/HITS.pool.root.1
[2025-10-12 15:58:08]  *** Contents of shared directory: ***
[2025-10-12 15:58:08] total 406328
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael 221128757 Oct 12 14:19 ATLAS.root_0
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael    569677 Oct 12 14:19 input.tar.gz
[2025-10-12 15:58:08] -rw-r--r-- 2 michael michael     15120 Oct 12 14:19 start_atlas.sh
[2025-10-12 15:58:08] -rw------- 1 michael michael 193170032 Oct 12 15:56 HITS.pool.root.1
[2025-10-12 15:58:08] -rw------- 1 michael michael   1177600 Oct 12 15:58 result.tar.gz
15:58:10 (3604505): run_atlas exited; CPU time 22237.705822
15:58:10 (3604505): called boinc_finish(0)

</stderr_txt>
]]>

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