Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:23:24 (3670001): wrapper (7.7.26015): starting
15:23:24 (3670001): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 15:23:24] Arguments: --nthreads 12
[2025-10-11 15:23:24] Threads: 12
[2025-10-11 15:23:24] Checking for CVMFS
[2025-10-11 15:23:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:23:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:23:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:23:25] 2.11.3.0 2494 23103 201732 151599 3 226 34453816 45568001 18198 130560 0 315887660 99.885 114441421 25068 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 15:23:25] CVMFS is ok
[2025-10-11 15:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:23:25] Further information can be found at the LHC@home message board.
[2025-10-11 15:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:23:25] Checking for apptainer binary...
[2025-10-11 15:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:23:25] Running /usr/bin/apptainer --version
[2025-10-11 15:23:25] apptainer version 1.4.1-1.el9
[2025-10-11 15:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:23:26] wns0171.triumf.lcg
[2025-10-11 15:23:26] apptainer works
[2025-10-11 15:23:26] Set ATHENA_PROC_NUMBER=12
[2025-10-11 15:23:26] Set ATHENA_CORE_NUMBER=12
[2025-10-11 15:23:26] Starting ATLAS job with PandaID=6838851391
[2025-10-11 15:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:28:14]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | WARNING  | wrong length of table data, x=[1760221498.0], y=[1405.0] (must be same and length>=4)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . Timing measurements:
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . get job = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . initial setup = 4 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload setup = 12 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-in = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload execution = 41 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-out = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . log creation = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838851391/pilotlog.txt
[2025-10-11 15:28:14] 2025-10-11 22:27:40,813 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 15:28:14] - Log from pilotlog.txt -
[2025-10-11 15:28:14] 2025-10-11 22:27:40,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838851391/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | INFO     | extracted standard info from prmon json
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | WARNING  | wrong length of table data, x=[1760221498.0], y=[1405.0] (must be same and length>=4)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . Timing measurements:
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . get job = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . initial setup = 4 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload setup = 12 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-in = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload execution = 41 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-out = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . log creation = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838851391/pilotlog.txt
[2025-10-11 15:28:14] 2025-10-11 22:27:40,814 | WARNING  | 
[2025-10-11 15:28:14] [begin log extracts]
[2025-10-11 15:28:14] - Log from pilotlog.txt -
[2025-10-11 15:28:14] 2025-10-11 22:27:40,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838851391/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | INFO     | extracted standard info from prmon json
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:28:14] 2025-10-11 22:27:40,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | WARNING  | wrong length of table data, x=[1760221498.0], y=[1405.0] (must be same and length>=4)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | could have reported an average CPU frequency of 2802 MHz (4 samples)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . Timing measurements:
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . get job = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . initial setup = 4 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload setup = 12 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-in = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . payload execution = 41 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . stage-out = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | . log creation = 0 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,782 | INFO     | ..............................
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 15:28:14] 2025-10-11 22:27:40,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838851391/pilotlog.txt
[2025-10-11 15:28:14] [end log extracts]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,819 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,820 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | 
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | job summary report
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | --------------------------------------------------
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | PanDA job id: 6838851391
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | task id: 46676269
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 15:25:18,412 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | pilot state: failed 
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | transexitcode: 65
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | exeerrorcode: 65
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | exitcode: 65
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | cpuconsumptiontime: 15 s
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | nevents: 0
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | neventsw: 0
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | pid: 3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:40,938 | INFO     | pgrp: 3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:40,939 | INFO     | corecount: 12
[2025-10-11 15:28:14] 2025-10-11 22:27:40,939 | INFO     | event service: False
[2025-10-11 15:28:14] 2025-10-11 22:27:40,941 | INFO     | sizes: {0: 2348029, 1: 2348882, 12: 2349172, 22: 2349172, 58: 2372350, 59: 2376642, 62: 2376798, 193: 2376964}
[2025-10-11 15:28:14] 2025-10-11 22:27:40,941 | INFO     | --------------------------------------------------
[2025-10-11 15:28:14] 2025-10-11 22:27:40,941 | INFO     | 
[2025-10-11 15:28:14] 2025-10-11 22:27:40,941 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 15:28:14] 2025-10-11 22:27:40,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:28:14] 2025-10-11 22:27:40,989 | INFO     | job 6838851391 has completed (purged errors)
[2025-10-11 15:28:14] 2025-10-11 22:27:40,990 | INFO     | overall cleanup function is called
[2025-10-11 15:28:14] 2025-10-11 22:27:41,996 | INFO     | --- collectZombieJob: --- 10, [3695620]
[2025-10-11 15:28:14] 2025-10-11 22:27:41,996 | INFO     | zombie collector waiting for pid 3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:41,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:28:14] 2025-10-11 22:27:41,996 | INFO     | collected zombie processes
[2025-10-11 15:28:14] 2025-10-11 22:27:41,996 | INFO     | will attempt to kill all subprocesses of pid=3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:42,182 | INFO     | process IDs to be killed: [3695620] (in reverse order)
[2025-10-11 15:28:14] 2025-10-11 22:27:42,261 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:28:14] 2025-10-11 22:27:42,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:28:14] 2025-10-11 22:27:42,269 | INFO     | did not find any defunct processes belonging to 3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:42,277 | INFO     | did not find any defunct processes belonging to 3695620
[2025-10-11 15:28:14] 2025-10-11 22:27:42,277 | INFO     | ready for new job
[2025-10-11 15:28:14] 2025-10-11 22:27:42,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:28:14] 2025-10-11 22:27:42,279 | INFO     | ***************************************
[2025-10-11 15:28:14] 2025-10-11 22:27:42,279 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:28:14] 2025-10-11 22:27:42,279 | INFO     | ***************************************
[2025-10-11 15:28:14] 2025-10-11 22:27:42,279 | INFO     | 
[2025-10-11 15:28:14] 2025-10-11 22:27:42,281 | INFO     | architecture information:
[2025-10-11 15:28:14] 2025-10-11 22:27:42,281 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:28:14] 2025-10-11 22:27:42,295 | INFO     | cat /etc/os-release:
[2025-10-11 15:28:14] NAME="CentOS Linux"
[2025-10-11 15:28:14] VERSION="7 (Core)"
[2025-10-11 15:28:14] ID="centos"
[2025-10-11 15:28:14] ID_LIKE="rhel fedora"
[2025-10-11 15:28:14] VERSION_ID="7"
[2025-10-11 15:28:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:28:14] ANSI_COLOR="0;31"
[2025-10-11 15:28:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:28:14] HOME_URL="https://www.centos.org/"
[2025-10-11 15:28:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:28:14] 
[2025-10-11 15:28:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:28:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:28:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:28:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:28:14] 
[2025-10-11 15:28:14] 2025-10-11 22:27:42,295 | INFO     | ***************************************
[2025-10-11 15:28:14] 2025-10-11 22:27:42,799 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 15:28:14] 2025-10-11 22:27:42,833 | INFO     | sufficient remaining disk space (2332308799488 B)
[2025-10-11 15:28:14] 2025-10-11 22:27:42,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:28:14] 2025-10-11 22:27:42,833 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:28:14] 2025-10-11 22:27:42,834 | INFO     | update_server=False
[2025-10-11 15:28:14] 2025-10-11 22:27:42,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:28:14] 2025-10-11 22:27:42,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:14] 2025-10-11 22:27:42,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:28:14] 2025-10-11 22:27:43,064 | INFO     | all data control threads have been joined
[2025-10-11 15:28:14] 2025-10-11 22:27:43,069 | INFO     | all job control threads have been joined
[2025-10-11 15:28:14] 2025-10-11 22:27:43,190 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 15:28:14] 2025-10-11 22:27:43,190 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 15:28:14] 2025-10-11 22:27:43,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:14] 2025-10-11 22:27:43,190 | INFO     | will abort loop
[2025-10-11 15:28:14] 2025-10-11 22:27:43,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:28:14] 2025-10-11 22:27:43,500 | INFO     | all payload control threads have been joined
[2025-10-11 15:28:14] 2025-10-11 22:27:43,840 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:43,840 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:43,842 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:43,969 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:44,070 | INFO     | [data] control thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:44,080 | INFO     | [job] control thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:44,196 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:44,506 | INFO     | [payload] control thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,000 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,232 | INFO     | [job] validate thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,259 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,300 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,406 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:45,497 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:46,852 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:28:14] 2025-10-11 22:27:53,267 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:28:14] 2025-10-11 22:27:55,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275316623168)>', '<ExcThread(monitor, started 140274997106432)>']
[2025-10-11 15:28:14] 2025-10-11 22:28:00,057 | INFO     | all workflow threads have been joined
[2025-10-11 15:28:14] 2025-10-11 22:28:00,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:28:14] 2025-10-11 22:28:00,057 | INFO     | traces error code: 0
[2025-10-11 15:28:14] 2025-10-11 22:28:00,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:28:14] 2025-10-11 22:28:13,448 | INFO     | PID=3677286 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:28:14] 2025-10-11 22:28:13,449 | INFO     | .. there are 34 such processes running
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 15:28:14] 2025-10-11 22:28:13,452 | INFO     | [monitor] control thread has ended
[2025-10-11 15:28:14] 2025-10-11 22:28:13,646 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:28:14] 2025-10-11 22:28:13,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:28:14] 2025-10-11 22:28:13,656 [wrapper] pilotpid: 3677286
[2025-10-11 15:28:14] 2025-10-11 22:28:13,661 [wrapper] Pilot exit status: 0
[2025-10-11 15:28:14] 2025-10-11 22:28:13,707 [wrapper] pandaids: 6838851391
[2025-10-11 15:28:14] 2025-10-11 22:28:13,798 [wrapper] cleanup supervisor_pilot 3677314 3677287
[2025-10-11 15:28:14] 2025-10-11 22:28:13,837 [wrapper] Test setup, not cleaning
[2025-10-11 15:28:14] 2025-10-11 22:28:13,870 [wrapper] apfmon messages muted
[2025-10-11 15:28:14] 2025-10-11 22:28:13,880 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:28:14] 2025-10-11 22:28:13,885 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:28:14]  *** Error codes and diagnostics ***
[2025-10-11 15:28:14]     "exeErrorCode": 65,
[2025-10-11 15:28:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 15:28:14]     "pilotErrorCode": 1305,
[2025-10-11 15:28:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 15:28:14]  *** Listing of results directory ***
[2025-10-11 15:28:14] total 218104
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc      5112 Oct 11 12:43 queuedata.json
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc    557409 Oct 11 12:43 pilot3.tar.gz
[2025-10-11 15:28:14] -rwx------. 1 boinc boinc     36292 Oct 11 12:44 runpilot2-wrapper.sh
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc       100 Oct 11 15:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:28:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 15:23 run_atlas
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc       105 Oct 11 15:23 job.xml
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc      6627 Oct 11 15:23 init_data.xml
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc 219206525 Oct 11 15:23 EVNT.46676267._002559.pool.root.1
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc     15120 Oct 11 15:23 start_atlas.sh
[2025-10-11 15:28:14] drwxrwx--x. 2 boinc boinc      4096 Oct 11 15:23 shared
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc    569676 Oct 11 15:23 input.tar.gz
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc         0 Oct 11 15:23 boinc_lockfile
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc      2550 Oct 11 15:23 pandaJob.out
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc    975520 Oct 11 15:23 agis_schedconf.cvmfs.json
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc   1560580 Oct 11 15:23 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:28:14] drwx------. 5 boinc boinc      4096 Oct 11 15:23 pilot3
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc       523 Oct 11 15:25 boinc_task_state.xml
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc       964 Oct 11 15:25 memory_monitor_summary.json
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc     21861 Oct 11 15:25 log.46676269._063693.job.log.tgz.1
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc      8383 Oct 11 15:27 heartbeat.json
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc        22 Oct 11 15:28 wrapper_checkpoint.txt
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc      8192 Oct 11 15:28 boinc_mmap_file
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc        95 Oct 11 15:28 pilot_heartbeat.json
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc       893 Oct 11 15:28 pilotlog.txt
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc     90611 Oct 11 15:28 log.46676269._063693.job.log.1
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc       188 Oct 11 15:28 output.list
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc       620 Oct 11 15:28 runtime_log
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc    133120 Oct 11 15:28 result.tar.gz
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc      8528 Oct 11 15:28 runtime_log.err
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc       645 Oct 11 15:28 lusMDmShuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqSSMDmZjvThn.diag
[2025-10-11 15:28:14] -rw-r--r--. 1 boinc boinc     21811 Oct 11 15:28 stderr.txt
[2025-10-11 15:28:14] No HITS result produced
[2025-10-11 15:28:14]  *** Contents of shared directory: ***
[2025-10-11 15:28:14] total 214784
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc 219206525 Oct 11 15:23 ATLAS.root_0
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc     15120 Oct 11 15:23 start_atlas.sh
[2025-10-11 15:28:14] -rw-r--r--. 2 boinc boinc    569676 Oct 11 15:23 input.tar.gz
[2025-10-11 15:28:14] -rw-------. 1 boinc boinc    133120 Oct 11 15:28 result.tar.gz
15:28:15 (3670001): run_atlas exited; CPU time 23.416641
15:28:15 (3670001): called boinc_finish(0)

</stderr_txt>
]]>

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