Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:13 (157810): wrapper (7.7.26015): starting
18:07:13 (157810): wrapper: running run_atlas (--nthreads 10)
[2025-10-11 18:07:13] Arguments: --nthreads 10
[2025-10-11 18:07:13] Threads: 10
[2025-10-11 18:07:13] Checking for CVMFS
[2025-10-11 18:07:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:07:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:07:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:07:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:07:14] 2.13.2.0 3269412 34866 390660 151597 3 591 26113881 40960001 46932 16776704 0 444753539 99.843 182595820 36835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 18:07:14] CVMFS is ok
[2025-10-11 18:07:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:07:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:07:14] Further information can be found at the LHC@home message board.
[2025-10-11 18:07:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:07:14] Checking for apptainer binary...
[2025-10-11 18:07:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:07:14] Running /usr/bin/apptainer --version
[2025-10-11 18:07:14] apptainer version 1.4.3-1.el9
[2025-10-11 18:07:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:07:15] c8-16-2.aglt2.org
[2025-10-11 18:07:15] apptainer works
[2025-10-11 18:07:15] Set ATHENA_PROC_NUMBER=10
[2025-10-11 18:07:15] Set ATHENA_CORE_NUMBER=10
[2025-10-11 18:07:15] Starting ATLAS job with PandaID=6838452368
[2025-10-11 18:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:03:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:03:26] 2025-10-11 23:02:23,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:24,071 | INFO     | time since job start (3272s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:25,527 | INFO     | monitor loop #230: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:25,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:26,079 | INFO     | time since job start (3274s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:28,079 | INFO     | monitor loop #231: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:28,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:29,307 | INFO     | PID=163635 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:03:26] 2025-10-11 23:02:29,307 | INFO     | .. there are 77 such processes running
[2025-10-11 19:03:26] 2025-10-11 23:02:30,318 | INFO     | time since job start (3278s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:30,596 | INFO     | monitor loop #232: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:30,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:32,325 | INFO     | time since job start (3280s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:33,103 | INFO     | monitor loop #233: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:33,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:34,332 | INFO     | time since job start (3282s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:35,644 | INFO     | monitor loop #234: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:35,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:36,370 | INFO     | time since job start (3284s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:38,152 | INFO     | monitor loop #235: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:38,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:38,377 | INFO     | time since job start (3286s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:40,386 | INFO     | time since job start (3288s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:40,663 | INFO     | monitor loop #236: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:40,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:42,393 | INFO     | time since job start (3290s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:43,176 | INFO     | monitor loop #237: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:43,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:44,400 | INFO     | time since job start (3292s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:45,688 | INFO     | monitor loop #238: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:45,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:46,407 | INFO     | time since job start (3294s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:48,195 | INFO     | monitor loop #239: job 0:6838452368 is in state 'finished'
[2025-10-11 19:03:26] 2025-10-11 23:02:48,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 19:03:26] 2025-10-11 23:02:48,416 | INFO     | time since job start (3296s) is within the limit (172800.0s)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,660 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 19:03:26] 2025-10-11 23:02:49,665 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9899609374943
[2025-10-11 19:03:26] 2025-10-11 23:02:49,757 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838452368/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,757 | INFO     | extracted standard info from prmon json
[2025-10-11 19:03:26] 2025-10-11 23:02:49,757 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:03:26] 2025-10-11 23:02:49,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:03:26] 2025-10-11 23:02:49,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:03:26] 2025-10-11 23:02:49,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:03:26] 2025-10-11 23:02:49,758 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:03:26] 2025-10-11 23:02:49,758 | INFO     | sum of square deviations: 28242390.0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,759 | INFO     | sum of deviations: 397982909.99999994
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | mean x: 1760222202.0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | mean y: 2225260.3777777776
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | -- intersect: -24802274436.65805
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | intersect: -24802274436.65805
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | chi2: 0.014034305541929984
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | -- intersect: -24802274436.65805
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | current memory leak: 14.09 B/s (using 45 data points, chi2=0.01)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | could have reported an average CPU frequency of 3798 MHz (5 samples)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | ..............................
[2025-10-11 19:03:26] 2025-10-11 23:02:49,765 | INFO     | . Timing measurements:
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . get job = 0 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . initial setup = 3 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . payload setup = 23 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . stage-in = 0 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . payload execution = 3187 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . stage-out = 3 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | . log creation = 0 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,766 | INFO     | ..............................
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | 
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | job summary report
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | --------------------------------------------------
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | PanDA job id: 6838452368
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | task id: 46676269
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | errors: (none)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | pilot state: finished 
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | transexitcode: 0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | exeerrorcode: 0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | exeerrordiag: 
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | exitcode: 0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | exitmsg: OK
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | cpuconsumptiontime: 22879 s
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | nevents: 400
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | neventsw: 0
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | pid: 180395
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | pgrp: 180395
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | corecount: 10
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | event service: False
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 20: 2349175, 22: 2349203, 3215: 2374918, 3220: 2383916, 3222: 2383972, 3257: 2384198}
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | --------------------------------------------------
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | 
[2025-10-11 19:03:26] 2025-10-11 23:02:49,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | job 6838452368 has completed (purged errors)
[2025-10-11 19:03:26] 2025-10-11 23:02:49,950 | INFO     | overall cleanup function is called
[2025-10-11 19:03:26] 2025-10-11 23:02:50,963 | INFO     | --- collectZombieJob: --- 10, [180395]
[2025-10-11 19:03:26] 2025-10-11 23:02:50,963 | INFO     | zombie collector waiting for pid 180395
[2025-10-11 19:03:26] 2025-10-11 23:02:50,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:03:26] 2025-10-11 23:02:50,963 | INFO     | collected zombie processes
[2025-10-11 19:03:26] 2025-10-11 23:02:50,963 | INFO     | will attempt to kill all subprocesses of pid=180395
[2025-10-11 19:03:26] 2025-10-11 23:02:52,794 | INFO     | process IDs to be killed: [180395] (in reverse order)
[2025-10-11 19:03:26] 2025-10-11 23:02:53,756 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:03:26] 2025-10-11 23:02:53,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:03:26] 2025-10-11 23:02:54,018 | INFO     | did not find any defunct processes belonging to 180395
[2025-10-11 19:03:26] 2025-10-11 23:02:54,084 | INFO     | did not find any defunct processes belonging to 180395
[2025-10-11 19:03:26] 2025-10-11 23:02:54,084 | INFO     | ready for new job
[2025-10-11 19:03:26] 2025-10-11 23:02:54,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:03:26] 2025-10-11 23:02:54,085 | INFO     | ***************************************
[2025-10-11 19:03:26] 2025-10-11 23:02:54,085 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:03:26] 2025-10-11 23:02:54,085 | INFO     | ***************************************
[2025-10-11 19:03:26] 2025-10-11 23:02:54,085 | INFO     | 
[2025-10-11 19:03:26] 2025-10-11 23:02:54,120 | INFO     | architecture information:
[2025-10-11 19:03:26] 2025-10-11 23:02:54,138 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:03:26] 2025-10-11 23:02:54,170 | INFO     | cat /etc/os-release:
[2025-10-11 19:03:26] NAME="CentOS Linux"
[2025-10-11 19:03:26] VERSION="7 (Core)"
[2025-10-11 19:03:26] ID="centos"
[2025-10-11 19:03:26] ID_LIKE="rhel fedora"
[2025-10-11 19:03:26] VERSION_ID="7"
[2025-10-11 19:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:03:26] ANSI_COLOR="0;31"
[2025-10-11 19:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:03:26] HOME_URL="https://www.centos.org/"
[2025-10-11 19:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:03:26] 
[2025-10-11 19:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:03:26] 
[2025-10-11 19:03:26] 2025-10-11 23:02:54,171 | INFO     | ***************************************
[2025-10-11 19:03:26] 2025-10-11 23:02:54,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 19:03:26] 2025-10-11 23:02:54,735 | INFO     | sufficient remaining disk space (167215366144 B)
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | INFO     | update_server=False
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:03:26] 2025-10-11 23:02:54,736 | INFO     | aborting loop
[2025-10-11 19:03:26] 2025-10-11 23:02:54,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:03:26] 2025-10-11 23:02:55,273 | INFO     | all data control threads have been joined
[2025-10-11 19:03:26] 2025-10-11 23:02:55,341 | INFO     | all job control threads have been joined
[2025-10-11 19:03:26] 2025-10-11 23:02:55,625 | INFO     | all payload control threads have been joined
[2025-10-11 19:03:26] 2025-10-11 23:02:55,742 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:55,742 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:55,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:03:26] 2025-10-11 23:02:55,922 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,029 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,039 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,292 | INFO     | [data] control thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,349 | INFO     | [job] control thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,630 | INFO     | [payload] control thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,678 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,783 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:56,972 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:57,122 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:03:26] 2025-10-11 23:02:57,126 | INFO     | [job] validate thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:57,175 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:02:57,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:03:26] 2025-10-11 23:02:57,751 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:03:01,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:03:05,438 | INFO     | job.realtimelogging is not enabled
[2025-10-11 19:03:26] 2025-10-11 23:03:06,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:03:26] 2025-10-11 23:03:08,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904103806784)>', '<ExcThread(monitor, started 139903148992256)>']
[2025-10-11 19:03:26] 2025-10-11 23:03:13,481 | INFO     | all workflow threads have been joined
[2025-10-11 19:03:26] 2025-10-11 23:03:13,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:03:26] 2025-10-11 23:03:13,481 | INFO     | traces error code: 0
[2025-10-11 19:03:26] 2025-10-11 23:03:13,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:03:26] 2025-10-11 23:03:24,717 | INFO     | PID=163635 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 19:03:26] 2025-10-11 23:03:24,762 | INFO     | .. there are 77 such processes running
[2025-10-11 19:03:26] 2025-10-11 23:03:24,762 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:03:26] 2025-10-11 23:03:24,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:03:26] 2025-10-11 23:03:24,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:03:26] 2025-10-11 23:03:24,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:03:26] 2025-10-11 23:03:24,763 | INFO     | [monitor] control thread has ended
[2025-10-11 19:03:26] 2025-10-11 23:03:24,992 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:03:26] 2025-10-11 23:03:25,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:03:26] 2025-10-11 23:03:25,031 [wrapper] pilotpid: 163635
[2025-10-11 19:03:26] 2025-10-11 23:03:25,070 [wrapper] Pilot exit status: 0
[2025-10-11 19:03:26] 2025-10-11 23:03:25,148 [wrapper] pandaids: 6838452368
[2025-10-11 19:03:26] 2025-10-11 23:03:25,703 [wrapper] cleanup supervisor_pilot  722688 163636
[2025-10-11 19:03:26] 2025-10-11 23:03:25,719 [wrapper] Test setup, not cleaning
[2025-10-11 19:03:26] 2025-10-11 23:03:25,735 [wrapper] apfmon messages muted
[2025-10-11 19:03:26] 2025-10-11 23:03:25,750 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:03:26] 2025-10-11 23:03:25,782 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:03:26]  *** Error codes and diagnostics ***
[2025-10-11 19:03:26]     "exeErrorCode": 0,
[2025-10-11 19:03:26]     "exeErrorDiag": "",
[2025-10-11 19:03:26]     "pilotErrorCode": 0,
[2025-10-11 19:03:26]     "pilotErrorDiag": "",
[2025-10-11 19:03:26]  *** Listing of results directory ***
[2025-10-11 19:03:26] total 411760
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 08:51 pilot3.tar.gz
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:37 queuedata.json
[2025-10-11 19:03:26] -rwx------. 1 boincer umatlas     36292 Oct 11 09:37 runpilot2-wrapper.sh
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas       100 Oct 11 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:03:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 18:07 run_atlas
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas       105 Oct 11 18:07 job.xml
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas 220016993 Oct 11 18:07 EVNT.46676267._002341.pool.root.1
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:07 start_atlas.sh
[2025-10-11 19:03:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 18:07 shared
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 18:07 input.tar.gz
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas         0 Oct 11 18:07 boinc_lockfile
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 18:07 pandaJob.out
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas    975528 Oct 11 18:07 agis_schedconf.cvmfs.json
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas   1560580 Oct 11 18:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:03:26] drwx------. 5 boincer umatlas      4096 Oct 11 18:07 pilot3
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas 196057376 Oct 11 19:01 HITS.46676269._058396.pool.root.1
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas       530 Oct 11 19:01 boinc_task_state.xml
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas      1035 Oct 11 19:02 memory_monitor_summary.json
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas    350473 Oct 11 19:02 log.46676269._058396.job.log.tgz.1
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas      7776 Oct 11 19:02 heartbeat.json
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 19:02 init_data.xml
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:03 boinc_mmap_file
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas        95 Oct 11 19:03 pilot_heartbeat.json
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas       822 Oct 11 19:03 pilotlog.txt
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas        27 Oct 11 19:03 wrapper_checkpoint.txt
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas    479708 Oct 11 19:03 log.46676269._058396.job.log.1
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas       357 Oct 11 19:03 output.list
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:03 runtime_log
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas    849920 Oct 11 19:03 result.tar.gz
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas      8700 Oct 11 19:03 runtime_log.err
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas       651 Oct 11 19:03 ac5NDmpxoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGyRMDms9i3pn.diag
[2025-10-11 19:03:26] -rw-r--r--. 1 boincer umatlas     22312 Oct 11 19:03 stderr.txt
[2025-10-11 19:03:26] HITS file was successfully produced:
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas 196057376 Oct 11 19:01 shared/HITS.pool.root.1
[2025-10-11 19:03:26]  *** Contents of shared directory: ***
[2025-10-11 19:03:26] total 407744
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas 220016993 Oct 11 18:07 ATLAS.root_0
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 18:07 start_atlas.sh
[2025-10-11 19:03:26] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 18:07 input.tar.gz
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas 196057376 Oct 11 19:01 HITS.pool.root.1
[2025-10-11 19:03:26] -rw-------. 1 boincer umatlas    849920 Oct 11 19:03 result.tar.gz
19:03:28 (157810): run_atlas exited; CPU time 22992.126471
19:03:28 (157810): called boinc_finish(0)

</stderr_txt>
]]>

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