Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:02 (2080452): wrapper (7.7.26015): starting
09:04:02 (2080452): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 09:04:02] Arguments: --nthreads 2
[2025-10-12 09:04:02] Threads: 2
[2025-10-12 09:04:02] Checking for CVMFS
[2025-10-12 09:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:04:02] 2.9.2.0 1188606 3889 61932 151611 0 57 34391309 36864000 0 130560 0 2342613 99.988 131826 943 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 09:04:02] CVMFS is ok
[2025-10-12 09:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:04:02] Further information can be found at the LHC@home message board.
[2025-10-12 09:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:04:02] Checking for apptainer binary...
[2025-10-12 09:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:04:02] Running /usr/bin/apptainer --version
[2025-10-12 09:04:02] apptainer version 1.4.1-1.1
[2025-10-12 09:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:04:02] magicA244
[2025-10-12 09:04:02] apptainer works
[2025-10-12 09:04:02] Set ATHENA_PROC_NUMBER=2
[2025-10-12 09:04:02] Set ATHENA_CORE_NUMBER=2
[2025-10-12 09:04:02] Starting ATLAS job with PandaID=6838633067
[2025-10-12 09:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:11:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:11:33] ANSI_COLOR="0;31"
[2025-10-12 11:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:11:33] HOME_URL="https://www.centos.org/"
[2025-10-12 11:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:11:33] 
[2025-10-12 11:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:11:33] 
[2025-10-12 11:11:33] 2025-10-12 09:10:49,082 | INFO     | ***************************************
[2025-10-12 11:11:33] 2025-10-12 09:10:49,586 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | INFO     | sufficient remaining disk space (489487859712 B)
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | INFO     | update_server=False
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:11:33] 2025-10-12 09:10:49,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:11:33] 2025-10-12 09:10:50,010 | INFO     | all payload control threads have been joined
[2025-10-12 11:11:33] 2025-10-12 09:10:50,094 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:11:33] 2025-10-12 09:10:50,095 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:11:33] 2025-10-12 09:10:50,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:11:33] 2025-10-12 09:10:50,095 | INFO     | will abort loop
[2025-10-12 11:11:33] 2025-10-12 09:10:50,168 | INFO     | all data control threads have been joined
[2025-10-12 11:11:33] 2025-10-12 09:10:50,584 | INFO     | all job control threads have been joined
[2025-10-12 11:11:33] 2025-10-12 09:10:50,604 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:50,605 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:50,817 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,016 | INFO     | [payload] control thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:11:33] 2025-10-12 09:10:51,101 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,174 | INFO     | [data] control thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,181 | INFO     | [job] validate thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,211 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,359 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,378 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,589 | INFO     | [job] control thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,716 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:51,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:11:33] 2025-10-12 09:10:51,815 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:53,107 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:55,783 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:10:59,778 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:11:33] 2025-10-12 09:11:00,784 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:11:33] 2025-10-12 09:11:19,663 | INFO     | PID=2084158 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:11:33] 2025-10-12 09:11:19,663 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:11:33] 2025-10-12 09:11:19,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:11:33] 2025-10-12 09:11:19,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:11:33] 2025-10-12 09:11:27,396 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:11:33] 2025-10-12 09:11:28,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935789545280)>', '<ExcThread(monitor, started 139934933448448)>']
[2025-10-12 11:11:33] 2025-10-12 09:11:28,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:11:33] 2025-10-12 09:11:28,707 | INFO     | [monitor] control thread has ended
[2025-10-12 11:11:33] 2025-10-12 09:11:33,364 | INFO     | all workflow threads have been joined
[2025-10-12 11:11:33] 2025-10-12 09:11:33,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:11:33] 2025-10-12 09:11:33,365 | INFO     | traces error code: 0
[2025-10-12 11:11:33] 2025-10-12 09:11:33,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:11:33] 2025-10-12 09:11:33,408 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:11:33] 2025-10-12 09:11:33,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:11:33] 2025-10-12 09:11:33,413 [wrapper] pilotpid: 2084158
[2025-10-12 11:11:33] 2025-10-12 09:11:33,415 [wrapper] Pilot exit status: 0
[2025-10-12 11:11:33] 2025-10-12 09:11:33,420 [wrapper] pandaids: 6838633067
[2025-10-12 11:11:33] 2025-10-12 09:11:33,433 [wrapper] cleanup supervisor_pilot 2104773 2084159
[2025-10-12 11:11:33] 2025-10-12 09:11:33,435 [wrapper] Test setup, not cleaning
[2025-10-12 11:11:33] 2025-10-12 09:11:33,437 [wrapper] apfmon messages muted
[2025-10-12 11:11:33] 2025-10-12 09:11:33,440 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:11:33] 2025-10-12 09:11:33,442 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:11:33]  *** Error codes and diagnostics ***
[2025-10-12 11:11:33]     "exeErrorCode": 0,
[2025-10-12 11:11:33]     "exeErrorDiag": "",
[2025-10-12 11:11:33]     "pilotErrorCode": 0,
[2025-10-12 11:11:33]     "pilotErrorDiag": "",
[2025-10-12 11:11:33]  *** Listing of results directory ***
[2025-10-12 11:11:33] total 417264
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:43 queuedata.json
[2025-10-12 11:11:33] -rwx------ 1 boinc boinc     36292 Oct 11 18:44 runpilot2-wrapper.sh
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:11:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:04 run_atlas
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:04 job.xml
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc 220947508 Oct 12 09:04 EVNT.46676267._002461.pool.root.1
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc    569678 Oct 12 09:04 input.tar.gz
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:04 start_atlas.sh
[2025-10-12 11:11:33] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:04 shared
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:04 boinc_setup_complete
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      6209 Oct 12 09:04 init_data.xml
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:04 boinc_lockfile
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      2550 Oct 12 09:04 pandaJob.out
[2025-10-12 11:11:33] -rw------- 1 boinc boinc    975528 Oct 12 09:04 agis_schedconf.cvmfs.json
[2025-10-12 11:11:33] -rw------- 1 boinc boinc   1560580 Oct 12 09:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:11:33] drwx------ 5 boinc boinc      4096 Oct 12 09:04 pilot3
[2025-10-12 11:11:33] -rw------- 1 boinc boinc 199693527 Oct 12 11:10 HITS.46676269._061276.pool.root.1
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc       529 Oct 12 11:10 boinc_task_state.xml
[2025-10-12 11:11:33] -rw------- 1 boinc boinc      1017 Oct 12 11:10 memory_monitor_summary.json
[2025-10-12 11:11:33] -rw------- 1 boinc boinc    269529 Oct 12 11:10 log.46676269._061276.job.log.tgz.1
[2025-10-12 11:11:33] -rw------- 1 boinc boinc      7755 Oct 12 11:10 heartbeat.json
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc        27 Oct 12 11:11 wrapper_checkpoint.txt
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      8192 Oct 12 11:11 boinc_mmap_file
[2025-10-12 11:11:33] -rw------- 1 boinc boinc        95 Oct 12 11:11 pilot_heartbeat.json
[2025-10-12 11:11:33] -rw------- 1 boinc boinc      5010 Oct 12 11:11 pilotlog.txt
[2025-10-12 11:11:33] -rw------- 1 boinc boinc   1099649 Oct 12 11:11 log.46676269._061276.job.log.1
[2025-10-12 11:11:33] -rw------- 1 boinc boinc       357 Oct 12 11:11 output.list
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc       620 Oct 12 11:11 runtime_log
[2025-10-12 11:11:33] -rw------- 1 boinc boinc   1392640 Oct 12 11:11 result.tar.gz
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      8792 Oct 12 11:11 runtime_log.err
[2025-10-12 11:11:33] -rw------- 1 boinc boinc       662 Oct 12 11:11 YuFKDmAtrR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH0gNDmShiPon.diag
[2025-10-12 11:11:33] -rw-r--r-- 1 boinc boinc      8835 Oct 12 11:11 stderr.txt
[2025-10-12 11:11:33] HITS file was successfully produced:
[2025-10-12 11:11:33] -rw------- 1 boinc boinc 199693527 Oct 12 11:10 shared/HITS.pool.root.1
[2025-10-12 11:11:33]  *** Contents of shared directory: ***
[2025-10-12 11:11:33] total 412732
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc 220947508 Oct 12 09:04 ATLAS.root_0
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc    569678 Oct 12 09:04 input.tar.gz
[2025-10-12 11:11:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:04 start_atlas.sh
[2025-10-12 11:11:33] -rw------- 1 boinc boinc 199693527 Oct 12 11:10 HITS.pool.root.1
[2025-10-12 11:11:33] -rw------- 1 boinc boinc   1392640 Oct 12 11:11 result.tar.gz
11:11:35 (2080452): run_atlas exited; CPU time 14797.822117
11:11:35 (2080452): called boinc_finish(0)

</stderr_txt>
]]>

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