Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:27:15 (2532876): wrapper (7.7.26015): starting
14:27:15 (2532876): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 14:27:15] Arguments: --nthreads 3
[2025-10-12 14:27:15] Threads: 3
[2025-10-12 14:27:15] Checking for CVMFS
[2025-10-12 14:27:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:27:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:27:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:27:15] 2.9.2.0 1204004 4240 81020 151620 2 57 4279601 36864001 0 130560 0 3284042 99.990 145496 741 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:27:15] CVMFS is ok
[2025-10-12 14:27:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:27:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:27:15] Further information can be found at the LHC@home message board.
[2025-10-12 14:27:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:27:15] Checking for apptainer binary...
[2025-10-12 14:27:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:27:15] Running /usr/bin/apptainer --version
[2025-10-12 14:27:15] apptainer version 1.4.1-1.1
[2025-10-12 14:27:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:27:15] thA312
[2025-10-12 14:27:15] apptainer works
[2025-10-12 14:27:15] Set ATHENA_PROC_NUMBER=3
[2025-10-12 14:27:15] Set ATHENA_CORE_NUMBER=3
[2025-10-12 14:27:15] Starting ATLAS job with PandaID=6838632976
[2025-10-12 14:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:53:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:53:32] 2025-10-12 13:52:40,205 | INFO     | sufficient remaining disk space (355520741376 B)
[2025-10-12 15:53:32] 2025-10-12 13:52:40,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:53:32] 2025-10-12 13:52:40,205 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:53:32] 2025-10-12 13:52:40,205 | INFO     | update_server=False
[2025-10-12 15:53:32] 2025-10-12 13:52:40,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:53:32] 2025-10-12 13:52:40,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:32] 2025-10-12 13:52:40,247 | INFO     | all payload control threads have been joined
[2025-10-12 15:53:32] 2025-10-12 13:52:40,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:53:32] 2025-10-12 13:52:40,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:32] 2025-10-12 13:52:40,586 | INFO     | aborting loop
[2025-10-12 15:53:32] 2025-10-12 13:52:40,829 | INFO     | all data control threads have been joined
[2025-10-12 15:53:32] 2025-10-12 13:52:41,209 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,210 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,234 | INFO     | all job control threads have been joined
[2025-10-12 15:53:32] 2025-10-12 13:52:41,252 | INFO     | [payload] control thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,271 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:53:32] 2025-10-12 13:52:41,377 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,586 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,835 | INFO     | [data] control thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,876 | INFO     | [job] validate thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,956 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:41,958 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:42,144 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:42,240 | INFO     | [job] control thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:42,253 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:43,294 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:52:44,299 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:53:32] 2025-10-12 13:53:10,246 | INFO     | PID=2536591 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:53:32] 2025-10-12 13:53:10,246 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:53:32] 2025-10-12 13:53:10,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:53:32] 2025-10-12 13:53:10,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:53:32] 2025-10-12 13:53:27,282 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:53:32] 2025-10-12 13:53:27,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610494224192)>', '<ExcThread(monitor, started 140609645967104)>']
[2025-10-12 15:53:32] 2025-10-12 13:53:28,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:53:32] 2025-10-12 13:53:28,340 | INFO     | [monitor] control thread has ended
[2025-10-12 15:53:32] 2025-10-12 13:53:32,518 | INFO     | all workflow threads have been joined
[2025-10-12 15:53:32] 2025-10-12 13:53:32,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:53:32] 2025-10-12 13:53:32,518 | INFO     | traces error code: 0
[2025-10-12 15:53:32] 2025-10-12 13:53:32,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:53:32] 2025-10-12 13:53:32,571 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:53:32] 2025-10-12 13:53:32,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:53:32] 2025-10-12 13:53:32,576 [wrapper] pilotpid: 2536591
[2025-10-12 15:53:32] 2025-10-12 13:53:32,578 [wrapper] Pilot exit status: 0
[2025-10-12 15:53:32] 2025-10-12 13:53:32,585 [wrapper] pandaids: 6838632976
[2025-10-12 15:53:32] 2025-10-12 13:53:32,603 [wrapper] cleanup supervisor_pilot 2554879 2536592
[2025-10-12 15:53:32] 2025-10-12 13:53:32,605 [wrapper] Test setup, not cleaning
[2025-10-12 15:53:32] 2025-10-12 13:53:32,607 [wrapper] apfmon messages muted
[2025-10-12 15:53:32] 2025-10-12 13:53:32,610 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:53:32] 2025-10-12 13:53:32,612 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:53:32]  *** Error codes and diagnostics ***
[2025-10-12 15:53:32]     "exeErrorCode": 0,
[2025-10-12 15:53:32]     "exeErrorDiag": "",
[2025-10-12 15:53:32]     "pilotErrorCode": 0,
[2025-10-12 15:53:32]     "pilotErrorDiag": "",
[2025-10-12 15:53:32]  *** Listing of results directory ***
[2025-10-12 15:53:32] total 412148
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:20 pilot3.tar.gz
[2025-10-12 15:53:32] -rwx------ 1 boinc boinc     36292 Oct 11 18:40 runpilot2-wrapper.sh
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:40 queuedata.json
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:53:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:27 run_atlas
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:27 job.xml
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc 220466347 Oct 12 14:27 EVNT.46676267._002457.pool.root.1
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc    569678 Oct 12 14:27 input.tar.gz
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:27 start_atlas.sh
[2025-10-12 15:53:32] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:27 shared
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:27 boinc_setup_complete
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      6437 Oct 12 14:27 init_data.xml
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:27 boinc_lockfile
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:27 pandaJob.out
[2025-10-12 15:53:32] -rw------- 1 boinc boinc    975512 Oct 12 14:27 agis_schedconf.cvmfs.json
[2025-10-12 15:53:32] -rw------- 1 boinc boinc   1560580 Oct 12 14:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:53:32] drwx------ 5 boinc boinc      4096 Oct 12 14:27 pilot3
[2025-10-12 15:53:32] -rw------- 1 boinc boinc 195678859 Oct 12 15:52 HITS.46676269._061185.pool.root.1
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:52 boinc_task_state.xml
[2025-10-12 15:53:32] -rw------- 1 boinc boinc      1022 Oct 12 15:52 memory_monitor_summary.json
[2025-10-12 15:53:32] -rw------- 1 boinc boinc    256229 Oct 12 15:52 log.46676269._061185.job.log.tgz.1
[2025-10-12 15:53:32] -rw------- 1 boinc boinc      7768 Oct 12 15:52 heartbeat.json
[2025-10-12 15:53:32] -rw------- 1 boinc boinc        95 Oct 12 15:53 pilot_heartbeat.json
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:53 boinc_mmap_file
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:53 wrapper_checkpoint.txt
[2025-10-12 15:53:32] -rw------- 1 boinc boinc      4752 Oct 12 15:53 pilotlog.txt
[2025-10-12 15:53:32] -rw------- 1 boinc boinc    748611 Oct 12 15:53 log.46676269._061185.job.log.1
[2025-10-12 15:53:32] -rw------- 1 boinc boinc       357 Oct 12 15:53 output.list
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:53 runtime_log
[2025-10-12 15:53:32] -rw------- 1 boinc boinc   1024000 Oct 12 15:53 result.tar.gz
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      8777 Oct 12 15:53 runtime_log.err
[2025-10-12 15:53:32] -rw------- 1 boinc boinc       658 Oct 12 15:53 5wKLDmporR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5ygNDmRNCP0n.diag
[2025-10-12 15:53:32] -rw-r--r-- 1 boinc boinc      7750 Oct 12 15:53 stderr.txt
[2025-10-12 15:53:32] HITS file was successfully produced:
[2025-10-12 15:53:32] -rw------- 1 boinc boinc 195678859 Oct 12 15:52 shared/HITS.pool.root.1
[2025-10-12 15:53:32]  *** Contents of shared directory: ***
[2025-10-12 15:53:32] total 407976
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc 220466347 Oct 12 14:27 ATLAS.root_0
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc    569678 Oct 12 14:27 input.tar.gz
[2025-10-12 15:53:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:27 start_atlas.sh
[2025-10-12 15:53:32] -rw------- 1 boinc boinc 195678859 Oct 12 15:52 HITS.pool.root.1
[2025-10-12 15:53:32] -rw------- 1 boinc boinc   1024000 Oct 12 15:53 result.tar.gz
15:53:54 (2532876): run_atlas exited; CPU time 14692.776137
15:53:54 (2532876): called boinc_finish(0)

</stderr_txt>
]]>

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